RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 PRKCSHP14314 528 aaPredicted RBP9.34□□□□□ -0.91
NCLP2-201ENST00000416078 PPP2R2DQ66LE6 453 aa9.34□□□□□ -0.91
NCLP2-201ENST00000416078 BICRAQ9NZM4 1560 aa9.34□□□□□ -0.91
NCLP2-201ENST00000416078 GDF9O60383 454 aa9.34□□□□□ -0.91
NCLP2-201ENST00000416078 TRIM32Q13049 653 aa9.34□□□□□ -0.91
NCLP2-201ENST00000416078 LYPD8Q6UX82 237 aa9.34□□□□□ -0.91
NCLP2-201ENST00000416078 ZBTB24O43167 697 aaPredicted RBP9.33□□□□□ -0.92
NCLP2-201ENST00000416078 EVA1BQ9NVM1 165 aa9.33□□□□□ -0.92
NCLP2-201ENST00000416078 CD2BP2O95400 341 aaKnown RBP9.32□□□□□ -0.92
NCLP2-201ENST00000416078 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
NCLP2-201ENST00000416078 ZSCAN1Q8NBB4 408 aa9.32□□□□□ -0.92
NCLP2-201ENST00000416078 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
NCLP2-201ENST00000416078 CCDC24Q8N4L8 307 aa9.31□□□□□ -0.92
NCLP2-201ENST00000416078 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
NCLP2-201ENST00000416078 PKD2L1Q9P0L9 805 aa9.31□□□□□ -0.92
NCLP2-201ENST00000416078 GMPR2Q9P2T1 348 aaKnown RBP9.31□□□□□ -0.92
NCLP2-201ENST00000416078 NUTM2BA6NNL0 878 aaPredicted RBP9.3□□□□□ -0.92
NCLP2-201ENST00000416078 NUTM2EB1AL46 878 aaPredicted RBP9.3□□□□□ -0.92
NCLP2-201ENST00000416078 KCNH2Q12809 1159 aa9.3□□□□□ -0.92
NCLP2-201ENST00000416078 NUTM2DQ5VT03 806 aaPredicted RBP9.3□□□□□ -0.92
NCLP2-201ENST00000416078 FBXO31Q5XUX0 539 aaPredicted RBP9.3□□□□□ -0.92
NCLP2-201ENST00000416078 PTCRAQ6ISU1 281 aaPredicted RBP9.3□□□□□ -0.92
NCLP2-201ENST00000416078 NUTM2AQ8IVF1 878 aaPredicted RBP9.3□□□□□ -0.92
NCLP2-201ENST00000416078 WNT7BP56706 349 aa9.29□□□□□ -0.92
NCLP2-201ENST00000416078 HELBQ8NG08 1087 aaPredicted RBP9.28□□□□□ -0.92
NCLP2-201ENST00000416078 WNT7AO00755 349 aa9.28□□□□□ -0.92
NCLP2-201ENST00000416078 PER1O15534 1290 aaPredicted RBP9.28□□□□□ -0.92
NCLP2-201ENST00000416078 LCE2CQ5TA81 110 aa9.28□□□□□ -0.92
NCLP2-201ENST00000416078 IL27Q8NEV9 243 aa9.28□□□□□ -0.92
NCLP2-201ENST00000416078 UNC93B1Q9H1C4 597 aa9.28□□□□□ -0.92
NCLP2-201ENST00000416078 SKOR1P84550 965 aa9.27□□□□□ -0.93
NCLP2-201ENST00000416078 CTC1Q2NKJ3 1217 aa9.27□□□□□ -0.93
NCLP2-201ENST00000416078 AVPP01185 164 aa9.26□□□□□ -0.93
NCLP2-201ENST00000416078 PCMTD1Q96MG8 357 aaPredicted RBP9.26□□□□□ -0.93
NCLP2-201ENST00000416078 SHROOM4Q9ULL8 1493 aa9.26□□□□□ -0.93
NCLP2-201ENST00000416078 AXIN1O15169 862 aa9.24□□□□□ -0.93
NCLP2-201ENST00000416078 TOR4AQ9NXH8 423 aa9.24□□□□□ -0.93
NCLP2-201ENST00000416078 MAP10Q9P2G4 905 aa9.24□□□□□ -0.93
NCLP2-201ENST00000416078 TNFRSF10AO00220 468 aa9.23□□□□□ -0.93
NCLP2-201ENST00000416078 RFC5P40937 340 aa9.22□□□□□ -0.93
NCLP2-201ENST00000416078 SLC16A10Q8TF71 515 aa9.22□□□□□ -0.93
NCLP2-201ENST00000416078 TSC1Q92574 1164 aa9.22□□□□□ -0.93
NCLP2-201ENST00000416078 KRTAP4-8Q9BYQ9 185 aa9.22□□□□□ -0.93
NCLP2-201ENST00000416078 DACH1Q9UI36 760 aa9.22□□□□□ -0.93
NCLP2-201ENST00000416078 CTHP32929 405 aa9.21□□□□□ -0.93
NCLP2-201ENST00000416078 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.93
NCLP2-201ENST00000416078 SH3BP2P78314 561 aa9.21□□□□□ -0.93
NCLP2-201ENST00000416078 FOXC1Q12948 553 aa9.21□□□□□ -0.93
NCLP2-201ENST00000416078 CTDSPL2Q05D32 466 aa9.21□□□□□ -0.94
NCLP2-201ENST00000416078 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.94
NCLP2-201ENST00000416078 ZNF511Q8NB15 262 aa9.21□□□□□ -0.94
NCLP2-201ENST00000416078 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
NCLP2-201ENST00000416078 MRGPRX2Q96LB1 330 aa9.2□□□□□ -0.94
NCLP2-201ENST00000416078 KCNMA1Q12791 1236 aa9.19□□□□□ -0.94
NCLP2-201ENST00000416078 KCTD17Q8N5Z5 321 aa9.19□□□□□ -0.94
NCLP2-201ENST00000416078 BAP1Q92560 729 aa9.19□□□□□ -0.94
NCLP2-201ENST00000416078 XP32Q5T750 250 aa9.18□□□□□ -0.94
NCLP2-201ENST00000416078 ARMC2Q8NEN0 867 aa9.18□□□□□ -0.94
NCLP2-201ENST00000416078 SIAH2O43255 324 aa9.17□□□□□ -0.94
NCLP2-201ENST00000416078 USP17L8P0C7I0 530 aa9.17□□□□□ -0.94
NCLP2-201ENST00000416078 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
NCLP2-201ENST00000416078 TMEM259Q4ZIN3 620 aa9.17□□□□□ -0.94
NCLP2-201ENST00000416078 CYP4X1Q8N118 509 aa9.17□□□□□ -0.94
NCLP2-201ENST00000416078 SNIP1Q8TAD8 396 aaKnown RBP9.17□□□□□ -0.94
NCLP2-201ENST00000416078 LRRN4Q8WUT4 740 aa9.17□□□□□ -0.94
NCLP2-201ENST00000416078 AP1G2O75843 785 aa9.16□□□□□ -0.94
NCLP2-201ENST00000416078 GPKOWQ92917 476 aaPredicted RBP eCLIP9.16□□□□□ -0.94
NCLP2-201ENST00000416078 ATP1B4Q9UN42 357 aaPredicted RBP9.16□□□□□ -0.94
NCLP2-201ENST00000416078 SOCS7O14512 581 aa9.15□□□□□ -0.94
NCLP2-201ENST00000416078 NBPF14Q5TI25 921 aa9.15□□□□□ -0.94
NCLP2-201ENST00000416078 MPNDQ8N594 471 aa9.15□□□□□ -0.94
NCLP2-201ENST00000416078 SENP2Q9HC62 589 aa9.15□□□□□ -0.94
NCLP2-201ENST00000416078 ZC3H4Q9UPT8 1303 aaKnown RBP9.15□□□□□ -0.94
NCLP2-201ENST00000416078 VARSP26640 1264 aaKnown RBP9.15□□□□□ -0.95
NCLP2-201ENST00000416078 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.95
NCLP2-201ENST00000416078 SMPD1P17405 629 aa9.14□□□□□ -0.95
NCLP2-201ENST00000416078 SH3RF1Q7Z6J0 888 aa9.14□□□□□ -0.95
NCLP2-201ENST00000416078 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
NCLP2-201ENST00000416078 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
NCLP2-201ENST00000416078 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
NCLP2-201ENST00000416078 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
NCLP2-201ENST00000416078 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
NCLP2-201ENST00000416078 FOXJ1Q92949 421 aa9.12□□□□□ -0.95
NCLP2-201ENST00000416078 FKBPLQ9UIM3 349 aa9.12□□□□□ -0.95
NCLP2-201ENST00000416078 NR6A1Q15406 480 aa9.11□□□□□ -0.95
NCLP2-201ENST00000416078 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
NCLP2-201ENST00000416078 BPHLQ86WA6 291 aaPredicted RBP9.11□□□□□ -0.95
NCLP2-201ENST00000416078 PDXDC2PQ6P474 469 aa9.1□□□□□ -0.95
NCLP2-201ENST00000416078 J3QL48 77 aa9.09□□□□□ -0.95
NCLP2-201ENST00000416078 GMPRP36959 345 aa9.09□□□□□ -0.95
NCLP2-201ENST00000416078 FAM174AQ8TBP5 190 aa9.09□□□□□ -0.95
NCLP2-201ENST00000416078 IRF7Q92985 503 aa9.09□□□□□ -0.95
NCLP2-201ENST00000416078 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
NCLP2-201ENST00000416078 TRIM34Q9BYJ4 488 aa9.09□□□□□ -0.95
NCLP2-201ENST00000416078 NPAS3Q8IXF0 933 aa9.08□□□□□ -0.96
NCLP2-201ENST00000416078 TRMT44Q8IYL2 757 aaKnown RBP9.08□□□□□ -0.96
NCLP2-201ENST00000416078 TMEM151AQ8N4L1 468 aa9.08□□□□□ -0.96
NCLP2-201ENST00000416078 GJD4Q96KN9 370 aaPredicted RBP9.08□□□□□ -0.96
NCLP2-201ENST00000416078 CDK15Q96Q40 435 aa9.08□□□□□ -0.96
NCLP2-201ENST00000416078 TLL2Q9Y6L7 1015 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms