RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 AGERQ15109 404 aa8.62□□□□□ -1.03
TRAPPC13-203ENST00000415825 MTMR2Q13614 643 aa8.61□□□□□ -1.03
TRAPPC13-203ENST00000415825 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
TRAPPC13-203ENST00000415825 RNF225M0QZC1 329 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC13-203ENST00000415825 TIMP2P16035 220 aa8.59□□□□□ -1.03
TRAPPC13-203ENST00000415825 HAP1P54257 671 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC13-203ENST00000415825 TTLL12Q14166 644 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC13-203ENST00000415825 C6orf118Q5T5N4 469 aa8.59□□□□□ -1.03
TRAPPC13-203ENST00000415825 DESI1Q6ICB0 168 aa8.59□□□□□ -1.03
TRAPPC13-203ENST00000415825 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
TRAPPC13-203ENST00000415825 BMP2P12643 396 aa8.58□□□□□ -1.04
TRAPPC13-203ENST00000415825 DIXDC1Q155Q3 683 aa8.58□□□□□ -1.04
TRAPPC13-203ENST00000415825 SPTLC1O15269 473 aa8.57□□□□□ -1.04
TRAPPC13-203ENST00000415825 ZIC2O95409 532 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-203ENST00000415825 SSTR3P32745 418 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-203ENST00000415825 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
TRAPPC13-203ENST00000415825 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC13-203ENST00000415825 NR5A1Q13285 461 aa8.56□□□□□ -1.04
TRAPPC13-203ENST00000415825 SOBPA7XYQ1 873 aa8.55□□□□□ -1.04
TRAPPC13-203ENST00000415825 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
TRAPPC13-203ENST00000415825 NDUFV2P19404 249 aa8.54□□□□□ -1.04
TRAPPC13-203ENST00000415825 KCNMA1Q12791 1236 aa8.54□□□□□ -1.04
TRAPPC13-203ENST00000415825 BPHLQ86WA6 291 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC13-203ENST00000415825 TMEM151AQ8N4L1 468 aa8.54□□□□□ -1.04
TRAPPC13-203ENST00000415825 MOXD2PA6NHM9 499 aa8.53□□□□□ -1.04
TRAPPC13-203ENST00000415825 SUZ12Q15022 739 aaKnown RBP8.52□□□□□ -1.05
TRAPPC13-203ENST00000415825 CDK15Q96Q40 435 aa8.52□□□□□ -1.05
TRAPPC13-203ENST00000415825 PPFIA3O75145 1194 aa8.51□□□□□ -1.05
TRAPPC13-203ENST00000415825 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
TRAPPC13-203ENST00000415825 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
TRAPPC13-203ENST00000415825 ARMC2Q8NEN0 867 aa8.51□□□□□ -1.05
TRAPPC13-203ENST00000415825 ITPKCQ96DU7 683 aa8.51□□□□□ -1.05
TRAPPC13-203ENST00000415825 LOC100996750A0A140TA64 210 aa8.5□□□□□ -1.05
TRAPPC13-203ENST00000415825 GDF11O95390 407 aa8.5□□□□□ -1.05
TRAPPC13-203ENST00000415825 LYPD8Q6UX82 237 aa8.5□□□□□ -1.05
TRAPPC13-203ENST00000415825 TSEN34Q9BSV6 310 aaKnown RBP8.5□□□□□ -1.05
TRAPPC13-203ENST00000415825 KRTAP4-6Q9BYQ5 205 aa8.5□□□□□ -1.05
TRAPPC13-203ENST00000415825 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
TRAPPC13-203ENST00000415825 GJA5P36382 358 aa8.49□□□□□ -1.05
TRAPPC13-203ENST00000415825 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
TRAPPC13-203ENST00000415825 ZBTB3Q9H5J0 574 aa8.49□□□□□ -1.05
TRAPPC13-203ENST00000415825 TSC1Q92574 1164 aa8.48□□□□□ -1.05
TRAPPC13-203ENST00000415825 FOXJ1Q92949 421 aa8.48□□□□□ -1.05
TRAPPC13-203ENST00000415825 BEGAINQ9BUH8 593 aa8.48□□□□□ -1.05
TRAPPC13-203ENST00000415825 NBPF14Q5TI25 921 aa8.47□□□□□ -1.05
TRAPPC13-203ENST00000415825 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC13-203ENST00000415825 EMILIN1Q9Y6C2 1016 aa8.47□□□□□ -1.05
TRAPPC13-203ENST00000415825 RASSF7Q02833 373 aa8.46□□□□□ -1.06
TRAPPC13-203ENST00000415825 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC13-203ENST00000415825 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
TRAPPC13-203ENST00000415825 MEIOBQ8N635 442 aa8.46□□□□□ -1.06
TRAPPC13-203ENST00000415825 FSHRP23945 695 aa8.45□□□□□ -1.06
TRAPPC13-203ENST00000415825 CNTNAP3BQ96NU0 1288 aa8.45□□□□□ -1.06
TRAPPC13-203ENST00000415825 CNTNAP3Q9BZ76 1288 aa8.45□□□□□ -1.06
TRAPPC13-203ENST00000415825 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
TRAPPC13-203ENST00000415825 TTLL8A6PVC2 850 aa8.44□□□□□ -1.06
TRAPPC13-203ENST00000415825 GIGYF2Q6Y7W6 1299 aaKnown RBP8.44□□□□□ -1.06
TRAPPC13-203ENST00000415825 TBC1D2Q9BYX2 928 aa8.44□□□□□ -1.06
TRAPPC13-203ENST00000415825 NUTM2BA6NNL0 878 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 NUTM2EB1AL46 878 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 NR3C2P08235 984 aa8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 NUTM2DQ5VT03 806 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 RSBN1LQ6PCB5 846 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 NUTM2AQ8IVF1 878 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 ADAMTS8Q9UP79 889 aa8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 SOS2Q07890 1332 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-203ENST00000415825 PRPF38BQ5VTL8 546 aaKnown RBP8.42□□□□□ -1.06
TRAPPC13-203ENST00000415825 CCDC116Q8IYX3 515 aa8.42□□□□□ -1.06
TRAPPC13-203ENST00000415825 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
TRAPPC13-203ENST00000415825 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
TRAPPC13-203ENST00000415825 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
TRAPPC13-203ENST00000415825 HRCP23327 699 aa8.41□□□□□ -1.06
TRAPPC13-203ENST00000415825 GRM5P41594 1212 aa8.41□□□□□ -1.06
TRAPPC13-203ENST00000415825 AMHR2Q16671 573 aa8.41□□□□□ -1.06
TRAPPC13-203ENST00000415825 HELBQ8NG08 1087 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC13-203ENST00000415825 F12P00748 615 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC13-203ENST00000415825 IGHA1P01876 353 aa8.4□□□□□ -1.06
TRAPPC13-203ENST00000415825 PTSQ03393 145 aa8.4□□□□□ -1.06
TRAPPC13-203ENST00000415825 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
TRAPPC13-203ENST00000415825 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC13-203ENST00000415825 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.06
TRAPPC13-203ENST00000415825 RIC3Q7Z5B4 369 aa8.39□□□□□ -1.07
TRAPPC13-203ENST00000415825 VSIG10Q8N0Z9 540 aa8.39□□□□□ -1.07
TRAPPC13-203ENST00000415825 KDM2AQ9Y2K7 1162 aa8.39□□□□□ -1.07
TRAPPC13-203ENST00000415825 CDC14CA4D256 554 aa8.38□□□□□ -1.07
TRAPPC13-203ENST00000415825 FOXK2Q01167 660 aa8.38□□□□□ -1.07
TRAPPC13-203ENST00000415825 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
TRAPPC13-203ENST00000415825 GPAT2Q6NUI2 795 aa8.38□□□□□ -1.07
TRAPPC13-203ENST00000415825 KANK3Q6NY19 840 aa8.38□□□□□ -1.07
TRAPPC13-203ENST00000415825 SCARF2Q96GP6 870 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC13-203ENST00000415825 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
TRAPPC13-203ENST00000415825 DHX9Q08211 1270 aaKnown RBP8.37□□□□□ -1.07
TRAPPC13-203ENST00000415825 SV2AQ7L0J3 742 aa8.37□□□□□ -1.07
TRAPPC13-203ENST00000415825 CARD14Q9BXL6 1004 aa8.37□□□□□ -1.07
TRAPPC13-203ENST00000415825 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
TRAPPC13-203ENST00000415825 DNMT3AQ9Y6K1 912 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC13-203ENST00000415825 IRS1P35568 1242 aa8.36□□□□□ -1.07
TRAPPC13-203ENST00000415825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms