RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
HMGA1P1-201ENST00000415560 COG3Q96JB2 828 aa19.15■□□□□ 0.66
HMGA1P1-201ENST00000415560 TTC21BQ7Z4L5 1316 aa19.15■□□□□ 0.66
HMGA1P1-201ENST00000415560 USP6P35125 1406 aa19.15■□□□□ 0.66
HMGA1P1-201ENST00000415560 PNISRQ8TF01 805 aaKnown RBP19.14■□□□□ 0.65
HMGA1P1-201ENST00000415560 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
HMGA1P1-201ENST00000415560 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
HMGA1P1-201ENST00000415560 PSME1Q06323 249 aa19.13■□□□□ 0.65
HMGA1P1-201ENST00000415560 LRRC7Q96NW7 1537 aa19.12■□□□□ 0.65
HMGA1P1-201ENST00000415560 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
HMGA1P1-201ENST00000415560 C1orf167Q5SNV9 1468 aa19.1■□□□□ 0.65
HMGA1P1-201ENST00000415560 XIRP1Q702N8 1843 aaKnown RBP19.1■□□□□ 0.65
HMGA1P1-201ENST00000415560 NME9Q86XW9 330 aa19.1■□□□□ 0.65
HMGA1P1-201ENST00000415560 KIF1AQ12756 1690 aa19.09■□□□□ 0.65
HMGA1P1-201ENST00000415560 WDR43Q15061 677 aaKnown RBP eCLIP19.09■□□□□ 0.65
HMGA1P1-201ENST00000415560 NRKQ7Z2Y5 1582 aa19.09■□□□□ 0.65
HMGA1P1-201ENST00000415560 MTHFSP49914 203 aa19.08■□□□□ 0.64
HMGA1P1-201ENST00000415560 ORAI2Q96SN7 254 aa19.08■□□□□ 0.64
HMGA1P1-201ENST00000415560 SSH2Q76I76 1423 aa19.08■□□□□ 0.64
HMGA1P1-201ENST00000415560 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
HMGA1P1-201ENST00000415560 MST1RQ04912 1400 aa19.07■□□□□ 0.64
HMGA1P1-201ENST00000415560 HNRNPUQ00839 825 aaKnown RBP eCLIP19.05■□□□□ 0.64
HMGA1P1-201ENST00000415560 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
HMGA1P1-201ENST00000415560 ABTB2Q8N961 1025 aa19.04■□□□□ 0.64
HMGA1P1-201ENST00000415560 INSRP06213 1382 aa19.04■□□□□ 0.64
HMGA1P1-201ENST00000415560 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
HMGA1P1-201ENST00000415560 USP31Q70CQ4 1352 aa19.04■□□□□ 0.64
HMGA1P1-201ENST00000415560 FOXO3O43524 673 aa19.03■□□□□ 0.64
HMGA1P1-201ENST00000415560 NLRP6P59044 892 aa19.03■□□□□ 0.64
HMGA1P1-201ENST00000415560 KRT28Q7Z3Y7 464 aa19.03■□□□□ 0.64
HMGA1P1-201ENST00000415560 NUDCQ9Y266 331 aa19.03■□□□□ 0.64
HMGA1P1-201ENST00000415560 SLAIN2Q9P270 581 aa19.02■□□□□ 0.64
HMGA1P1-201ENST00000415560 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
HMGA1P1-201ENST00000415560 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
HMGA1P1-201ENST00000415560 OVOS2A0A0J9YW53 1432 aa19■□□□□ 0.63
HMGA1P1-201ENST00000415560 OVOS2Q6IE36 1432 aa19■□□□□ 0.63
HMGA1P1-201ENST00000415560 POLKQ9UBT6 870 aa18.99■□□□□ 0.63
HMGA1P1-201ENST00000415560 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
HMGA1P1-201ENST00000415560 ADAMTS8Q9UP79 889 aa18.98■□□□□ 0.63
HMGA1P1-201ENST00000415560 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
HMGA1P1-201ENST00000415560 PIK3C2AO00443 1686 aa18.97■□□□□ 0.63
HMGA1P1-201ENST00000415560 USP54Q70EL1 1684 aa18.96■□□□□ 0.63
HMGA1P1-201ENST00000415560 KCNH5Q8NCM2 988 aa18.96■□□□□ 0.63
HMGA1P1-201ENST00000415560 PNNQ9H307 717 aaKnown RBP18.96■□□□□ 0.63
HMGA1P1-201ENST00000415560 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
HMGA1P1-201ENST00000415560 LTBP4Q8N2S1 1624 aa18.94■□□□□ 0.62
HMGA1P1-201ENST00000415560 LMOD2Q6P5Q4 547 aa18.94■□□□□ 0.62
HMGA1P1-201ENST00000415560 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
HMGA1P1-201ENST00000415560 SBNO1A3KN83 1393 aa18.93■□□□□ 0.62
HMGA1P1-201ENST00000415560 XPCQ01831 940 aaPredicted RBP18.93■□□□□ 0.62
HMGA1P1-201ENST00000415560 NUTM2GQ5VZR2 741 aa18.93■□□□□ 0.62
HMGA1P1-201ENST00000415560 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
HMGA1P1-201ENST00000415560 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
HMGA1P1-201ENST00000415560 SMG6Q86US8 1419 aaKnown RBP18.92■□□□□ 0.62
HMGA1P1-201ENST00000415560 TRPM3Q9HCF6 1732 aaPredicted RBP18.92■□□□□ 0.62
HMGA1P1-201ENST00000415560 FBLN1P23142 703 aa18.92■□□□□ 0.62
HMGA1P1-201ENST00000415560 RRS1Q15050 365 aaKnown RBP18.92■□□□□ 0.62
HMGA1P1-201ENST00000415560 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
HMGA1P1-201ENST00000415560 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
HMGA1P1-201ENST00000415560 U2SURPO15042 1029 aaKnown RBP18.91■□□□□ 0.62
HMGA1P1-201ENST00000415560 U2AF1L5P0DN76 240 aaPredicted RBP18.91■□□□□ 0.62
HMGA1P1-201ENST00000415560 AMPHP49418 695 aa18.91■□□□□ 0.62
HMGA1P1-201ENST00000415560 U2AF1Q01081 240 aaKnown RBP eCLIP18.91■□□□□ 0.62
HMGA1P1-201ENST00000415560 NGEFQ8N5V2 710 aa18.91■□□□□ 0.62
HMGA1P1-201ENST00000415560 SHPRHQ149N8 1683 aa18.9■□□□□ 0.62
HMGA1P1-201ENST00000415560 SOX12O15370 315 aa18.9■□□□□ 0.62
HMGA1P1-201ENST00000415560 KIF24Q5T7B8 1368 aa18.9■□□□□ 0.62
HMGA1P1-201ENST00000415560 NEFMP07197 916 aa18.88■□□□□ 0.61
HMGA1P1-201ENST00000415560 RUNDC1Q96C34 613 aa18.88■□□□□ 0.61
HMGA1P1-201ENST00000415560 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
HMGA1P1-201ENST00000415560 COL3A1P02461 1466 aaPredicted RBP18.87■□□□□ 0.61
HMGA1P1-201ENST00000415560 MARF1Q9Y4F3 1742 aaKnown RBP18.87■□□□□ 0.61
HMGA1P1-201ENST00000415560 ALS2Q96Q42 1657 aa18.86■□□□□ 0.61
HMGA1P1-201ENST00000415560 FLT4P35916 1363 aa18.86■□□□□ 0.61
HMGA1P1-201ENST00000415560 MAP3K19Q56UN5 1328 aa18.86■□□□□ 0.61
HMGA1P1-201ENST00000415560 SPATA31A3Q5VYP0 1347 aa18.86■□□□□ 0.61
HMGA1P1-201ENST00000415560 TOM1O60784 492 aa18.86■□□□□ 0.61
HMGA1P1-201ENST00000415560 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
HMGA1P1-201ENST00000415560 PXDNQ92626 1479 aa18.85■□□□□ 0.61
HMGA1P1-201ENST00000415560 TNS3Q68CZ2 1445 aa18.85■□□□□ 0.61
HMGA1P1-201ENST00000415560 SOS2Q07890 1332 aaPredicted RBP18.85■□□□□ 0.61
HMGA1P1-201ENST00000415560 FCHSD2O94868 740 aa18.85■□□□□ 0.61
HMGA1P1-201ENST00000415560 GCP02774 474 aa18.85■□□□□ 0.61
HMGA1P1-201ENST00000415560 IL13P35225 146 aa18.85■□□□□ 0.61
HMGA1P1-201ENST00000415560 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
HMGA1P1-201ENST00000415560 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
HMGA1P1-201ENST00000415560 USP19O94966 1318 aa18.83■□□□□ 0.61
HMGA1P1-201ENST00000415560 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
HMGA1P1-201ENST00000415560 MAPK8IP3Q9UPT6 1336 aa18.82■□□□□ 0.6
HMGA1P1-201ENST00000415560 SLIT3O75094 1523 aa18.82■□□□□ 0.6
HMGA1P1-201ENST00000415560 LTN1O94822 1766 aa18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 APAF1O14727 1248 aa18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 HOXC9P31274 260 aa18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 EIF4A2Q14240 407 aaKnown RBP18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 IP6K1Q92551 441 aa18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
HMGA1P1-201ENST00000415560 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms