RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 DCCP43146 1447 aa28.84■■■□□ 2.21
CEACAM3-203ENST00000415495 LRRC7Q96NW7 1537 aa28.84■■■□□ 2.21
CEACAM3-203ENST00000415495 ZRANB1Q9UGI0 708 aa28.83■■■□□ 2.21
CEACAM3-203ENST00000415495 XIRP1Q702N8 1843 aaKnown RBP28.82■■■□□ 2.2
CEACAM3-203ENST00000415495 CENPBP07199 599 aaPredicted RBP28.8■■■□□ 2.2
CEACAM3-203ENST00000415495 ESCO1Q5FWF5 840 aa28.8■■■□□ 2.2
CEACAM3-203ENST00000415495 C1orf167Q5SNV9 1468 aa28.8■■■□□ 2.2
CEACAM3-203ENST00000415495 TTC21AQ8NDW8 1320 aa28.79■■■□□ 2.2
CEACAM3-203ENST00000415495 SCAF1Q9H7N4 1312 aaKnown RBP28.79■■■□□ 2.2
CEACAM3-203ENST00000415495 MTHFSP49914 203 aa28.79■■■□□ 2.2
CEACAM3-203ENST00000415495 ORAI2Q96SN7 254 aa28.79■■■□□ 2.2
CEACAM3-203ENST00000415495 ATF3P18847 181 aa28.78■■■□□ 2.2
CEACAM3-203ENST00000415495 MST1RQ04912 1400 aa28.78■■■□□ 2.2
CEACAM3-203ENST00000415495 HNRNPUQ00839 825 aaKnown RBP eCLIP28.76■■■□□ 2.19
CEACAM3-203ENST00000415495 CADPS2Q86UW7 1296 aa28.76■■■□□ 2.19
CEACAM3-203ENST00000415495 MSH6P52701 1360 aa28.75■■■□□ 2.19
CEACAM3-203ENST00000415495 COG3Q96JB2 828 aa28.75■■■□□ 2.19
CEACAM3-203ENST00000415495 INSRP06213 1382 aa28.74■■■□□ 2.19
CEACAM3-203ENST00000415495 OVOS2A0A0J9YW53 1432 aa28.73■■■□□ 2.19
CEACAM3-203ENST00000415495 OVOS2Q6IE36 1432 aa28.73■■■□□ 2.19
CEACAM3-203ENST00000415495 USP31Q70CQ4 1352 aa28.72■■■□□ 2.19
CEACAM3-203ENST00000415495 AATKQ6ZMQ8 1374 aa28.71■■■□□ 2.19
CEACAM3-203ENST00000415495 FBLN1P23142 703 aa28.7■■■□□ 2.19
CEACAM3-203ENST00000415495 ADAMTS8Q9UP79 889 aa28.7■■■□□ 2.19
CEACAM3-203ENST00000415495 POLKQ9UBT6 870 aa28.69■■■□□ 2.18
CEACAM3-203ENST00000415495 PSME1Q06323 249 aa28.68■■■□□ 2.18
CEACAM3-203ENST00000415495 FOXO3O43524 673 aa28.67■■■□□ 2.18
CEACAM3-203ENST00000415495 CFAP53Q96M91 514 aa28.67■■■□□ 2.18
CEACAM3-203ENST00000415495 PIK3C2AO00443 1686 aa28.67■■■□□ 2.18
CEACAM3-203ENST00000415495 PNPLA6Q8IY17 1366 aa28.67■■■□□ 2.18
CEACAM3-203ENST00000415495 WDR43Q15061 677 aaKnown RBP eCLIP28.66■■■□□ 2.18
CEACAM3-203ENST00000415495 KIF1AQ12756 1690 aa28.66■■■□□ 2.18
CEACAM3-203ENST00000415495 BLMP54132 1417 aaPredicted RBP28.65■■■□□ 2.18
CEACAM3-203ENST00000415495 SHPRHQ149N8 1683 aa28.64■■■□□ 2.18
CEACAM3-203ENST00000415495 SMG6Q86US8 1419 aaKnown RBP28.64■■■□□ 2.17
CEACAM3-203ENST00000415495 COL3A1P02461 1466 aaPredicted RBP28.63■■■□□ 2.17
CEACAM3-203ENST00000415495 MAP2P11137 1827 aaKnown RBP28.63■■■□□ 2.17
CEACAM3-203ENST00000415495 PAK3O75914 559 aaPredicted RBP28.61■■■□□ 2.17
CEACAM3-203ENST00000415495 USP54Q70EL1 1684 aa28.61■■■□□ 2.17
CEACAM3-203ENST00000415495 ZBED9Q6R2W3 1325 aa28.61■■■□□ 2.17
CEACAM3-203ENST00000415495 NLRP6P59044 892 aa28.61■■■□□ 2.17
CEACAM3-203ENST00000415495 ABTB2Q8N961 1025 aa28.61■■■□□ 2.17
CEACAM3-203ENST00000415495 KRT28Q7Z3Y7 464 aa28.6■■■□□ 2.17
CEACAM3-203ENST00000415495 EMILIN1Q9Y6C2 1016 aa28.6■■■□□ 2.17
CEACAM3-203ENST00000415495 MARF1Q9Y4F3 1742 aaKnown RBP28.59■■■□□ 2.17
CEACAM3-203ENST00000415495 LTBP4Q8N2S1 1624 aa28.58■■■□□ 2.17
CEACAM3-203ENST00000415495 XPCQ01831 940 aaPredicted RBP28.58■■■□□ 2.17
CEACAM3-203ENST00000415495 RRS1Q15050 365 aaKnown RBP28.58■■■□□ 2.17
CEACAM3-203ENST00000415495 SLAIN2Q9P270 581 aa28.58■■■□□ 2.17
CEACAM3-203ENST00000415495 TRPM3Q9HCF6 1732 aaPredicted RBP28.57■■■□□ 2.16
CEACAM3-203ENST00000415495 NUTM2GQ5VZR2 741 aa28.55■■■□□ 2.16
CEACAM3-203ENST00000415495 CDK12Q9NYV4 1490 aaPredicted RBP28.55■■■□□ 2.16
CEACAM3-203ENST00000415495 BRINP3Q76B58 766 aa28.54■■■□□ 2.16
CEACAM3-203ENST00000415495 PPM1GO15355 546 aaPredicted RBP28.54■■■□□ 2.16
CEACAM3-203ENST00000415495 DIAPH1O60610 1272 aaKnown RBP28.53■■■□□ 2.16
CEACAM3-203ENST00000415495 DDX17Q92841 729 aaKnown RBP28.52■■■□□ 2.16
CEACAM3-203ENST00000415495 SENP3-EIF4A1A0A087X0R7 540 aa28.51■■■□□ 2.15
CEACAM3-203ENST00000415495 NPHP3Q7Z494 1330 aa28.51■■■□□ 2.15
CEACAM3-203ENST00000415495 NUDCQ9Y266 331 aa28.51■■■□□ 2.15
CEACAM3-203ENST00000415495 MAP3K19Q56UN5 1328 aa28.49■■■□□ 2.15
CEACAM3-203ENST00000415495 SBNO1A3KN83 1393 aa28.49■■■□□ 2.15
CEACAM3-203ENST00000415495 SOX12O15370 315 aa28.48■■■□□ 2.15
CEACAM3-203ENST00000415495 IL13P35225 146 aa28.47■■■□□ 2.15
CEACAM3-203ENST00000415495 CCDC146Q8IYE0 955 aa28.47■■■□□ 2.15
CEACAM3-203ENST00000415495 PXDNQ92626 1479 aa28.47■■■□□ 2.15
CEACAM3-203ENST00000415495 PEAK1Q9H792 1746 aa28.47■■■□□ 2.15
CEACAM3-203ENST00000415495 U2AF1L5P0DN76 240 aaPredicted RBP28.47■■■□□ 2.15
CEACAM3-203ENST00000415495 U2AF1Q01081 240 aaKnown RBP eCLIP28.47■■■□□ 2.15
CEACAM3-203ENST00000415495 ALS2Q96Q42 1657 aa28.46■■■□□ 2.15
CEACAM3-203ENST00000415495 U2SURPO15042 1029 aaKnown RBP28.44■■■□□ 2.14
CEACAM3-203ENST00000415495 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
CEACAM3-203ENST00000415495 USP19O94966 1318 aa28.43■■■□□ 2.14
CEACAM3-203ENST00000415495 RUNDC1Q96C34 613 aa28.43■■■□□ 2.14
CEACAM3-203ENST00000415495 SLIT3O75094 1523 aa28.42■■■□□ 2.14
CEACAM3-203ENST00000415495 NFAT5O94916 1531 aa28.42■■■□□ 2.14
CEACAM3-203ENST00000415495 APAF1O14727 1248 aa28.41■■■□□ 2.14
CEACAM3-203ENST00000415495 HSP90AB2PQ58FF8 381 aa28.41■■■□□ 2.14
CEACAM3-203ENST00000415495 KIF24Q5T7B8 1368 aa28.41■■■□□ 2.14
CEACAM3-203ENST00000415495 KCNH5Q8NCM2 988 aa28.41■■■□□ 2.14
CEACAM3-203ENST00000415495 SALL2Q9Y467 1007 aaPredicted RBP28.41■■■□□ 2.14
CEACAM3-203ENST00000415495 SOS2Q07890 1332 aaPredicted RBP28.4■■■□□ 2.14
CEACAM3-203ENST00000415495 SPATA31A3Q5VYP0 1347 aa28.4■■■□□ 2.14
CEACAM3-203ENST00000415495 LMOD2Q6P5Q4 547 aa28.4■■■□□ 2.14
CEACAM3-203ENST00000415495 FLT4P35916 1363 aa28.4■■■□□ 2.14
CEACAM3-203ENST00000415495 PLEKHF1Q96S99 279 aa28.4■■■□□ 2.14
CEACAM3-203ENST00000415495 GCP02774 474 aa28.39■■■□□ 2.13
CEACAM3-203ENST00000415495 EIF4A2Q14240 407 aaKnown RBP28.39■■■□□ 2.13
CEACAM3-203ENST00000415495 TNS3Q68CZ2 1445 aa28.38■■■□□ 2.13
CEACAM3-203ENST00000415495 AMPHP49418 695 aa28.37■■■□□ 2.13
CEACAM3-203ENST00000415495 FCHSD2O94868 740 aa28.36■■■□□ 2.13
CEACAM3-203ENST00000415495 ZNF521Q96K83 1311 aa28.35■■■□□ 2.13
CEACAM3-203ENST00000415495 IQSEC2Q5JU85 1478 aa28.35■■■□□ 2.13
CEACAM3-203ENST00000415495 HOXC9P31274 260 aa28.35■■■□□ 2.13
CEACAM3-203ENST00000415495 NGEFQ8N5V2 710 aa28.35■■■□□ 2.13
CEACAM3-203ENST00000415495 MED1Q15648 1581 aaPredicted RBP28.35■■■□□ 2.13
CEACAM3-203ENST00000415495 TCP11L2Q8N4U5 519 aa28.34■■■□□ 2.13
CEACAM3-203ENST00000415495 RSPH6AQ9H0K4 717 aa28.34■■■□□ 2.13
CEACAM3-203ENST00000415495 NHSL1Q5SYE7 1610 aa28.32■■■□□ 2.12
CEACAM3-203ENST00000415495 ARHGEF25Q86VW2 580 aa28.32■■■□□ 2.12
CEACAM3-203ENST00000415495 RTL1A6NKG5 1358 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms