RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 TNS1Q9HBL0 1735 aaKnown RBP23.69■■□□□ 1.38
SYNGR1-206ENST00000415332 THSD7AQ9UPZ6 1657 aa23.67■■□□□ 1.38
SYNGR1-206ENST00000415332 TRAK1Q9UPV9 953 aa23.67■■□□□ 1.38
SYNGR1-206ENST00000415332 SPATA31A5Q5VU36 1347 aa23.66■■□□□ 1.38
SYNGR1-206ENST00000415332 SPATA31A7Q8IWB4 1347 aa23.66■■□□□ 1.38
SYNGR1-206ENST00000415332 MINK1Q8N4C8 1332 aaPredicted RBP23.66■■□□□ 1.38
SYNGR1-206ENST00000415332 ACIN1Q9UKV3 1341 aaKnown RBP23.66■■□□□ 1.38
SYNGR1-206ENST00000415332 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
SYNGR1-206ENST00000415332 TULP4Q9NRJ4 1543 aa23.64■■□□□ 1.37
SYNGR1-206ENST00000415332 R3HDM1Q15032 1099 aaKnown RBP23.63■■□□□ 1.37
SYNGR1-206ENST00000415332 WASLO00401 505 aaPredicted RBP23.6■■□□□ 1.37
SYNGR1-206ENST00000415332 PAK3O75914 559 aaPredicted RBP23.6■■□□□ 1.37
SYNGR1-206ENST00000415332 EZH2Q15910 746 aaKnown RBP23.6■■□□□ 1.37
SYNGR1-206ENST00000415332 DISP2A7MBM2 1401 aa23.59■■□□□ 1.37
SYNGR1-206ENST00000415332 NGDNQ8NEJ9 315 aaKnown RBP23.58■■□□□ 1.37
SYNGR1-206ENST00000415332 PRDM11Q9NQV5 511 aa23.58■■□□□ 1.37
SYNGR1-206ENST00000415332 PHRF1Q9P1Y6 1649 aaKnown RBP23.58■■□□□ 1.36
SYNGR1-206ENST00000415332 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
SYNGR1-206ENST00000415332 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
SYNGR1-206ENST00000415332 SPATA31A1Q5TZJ5 1347 aa23.57■■□□□ 1.36
SYNGR1-206ENST00000415332 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
SYNGR1-206ENST00000415332 CHRNA2Q15822 529 aa23.56■■□□□ 1.36
SYNGR1-206ENST00000415332 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
SYNGR1-206ENST00000415332 TRIM37O94972 964 aa23.55■■□□□ 1.36
SYNGR1-206ENST00000415332 ARHGEF28Q8N1W1 1705 aaKnown RBP23.55■■□□□ 1.36
SYNGR1-206ENST00000415332 CAMKK2Q96RR4 588 aa23.54■■□□□ 1.36
SYNGR1-206ENST00000415332 STRN4Q9NRL3 753 aa23.53■■□□□ 1.36
SYNGR1-206ENST00000415332 ATP7BP35670 1465 aa23.52■■□□□ 1.36
SYNGR1-206ENST00000415332 ZC3H6P61129 1189 aaKnown RBP23.51■■□□□ 1.35
SYNGR1-206ENST00000415332 NUTM2GQ5VZR2 741 aa23.51■■□□□ 1.35
SYNGR1-206ENST00000415332 DCAF11Q8TEB1 546 aa23.51■■□□□ 1.35
SYNGR1-206ENST00000415332 FAM196AQ6ZSG2 479 aa23.5■■□□□ 1.35
SYNGR1-206ENST00000415332 NUDT16Q96DE0 195 aaKnown RBP23.5■■□□□ 1.35
SYNGR1-206ENST00000415332 RREB1Q92766 1687 aa23.5■■□□□ 1.35
SYNGR1-206ENST00000415332 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
SYNGR1-206ENST00000415332 USP35Q9P2H5 1018 aa23.49■■□□□ 1.35
SYNGR1-206ENST00000415332 NUP188Q5SRE5 1749 aa23.48■■□□□ 1.35
SYNGR1-206ENST00000415332 APBA3O96018 575 aa23.48■■□□□ 1.35
SYNGR1-206ENST00000415332 TOPAZ1Q8N9V7 1692 aa23.47■■□□□ 1.35
SYNGR1-206ENST00000415332 SSH2Q76I76 1423 aa23.45■■□□□ 1.34
SYNGR1-206ENST00000415332 CAMTA1Q9Y6Y1 1673 aa23.44■■□□□ 1.34
SYNGR1-206ENST00000415332 NRKQ7Z2Y5 1582 aa23.44■■□□□ 1.34
SYNGR1-206ENST00000415332 CDK19Q9BWU1 502 aa23.43■■□□□ 1.34
SYNGR1-206ENST00000415332 LMO7Q8WWI1 1683 aa23.42■■□□□ 1.34
SYNGR1-206ENST00000415332 ACEP12821 1306 aa23.42■■□□□ 1.34
SYNGR1-206ENST00000415332 EVA1CP58658 441 aa23.42■■□□□ 1.34
SYNGR1-206ENST00000415332 LARP1Q6PKG0 1096 aaKnown RBP23.42■■□□□ 1.34
SYNGR1-206ENST00000415332 BARGINQ6ZT62 677 aa23.42■■□□□ 1.34
SYNGR1-206ENST00000415332 PARD3Q8TEW0 1356 aa23.41■■□□□ 1.34
SYNGR1-206ENST00000415332 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
SYNGR1-206ENST00000415332 POLR3AO14802 1390 aaPredicted RBP23.4■■□□□ 1.34
SYNGR1-206ENST00000415332 PDE3BQ13370 1112 aa23.4■■□□□ 1.34
SYNGR1-206ENST00000415332 TCP11L2Q8N4U5 519 aa23.37■■□□□ 1.33
SYNGR1-206ENST00000415332 PARP4Q9UKK3 1724 aaKnown RBP23.36■■□□□ 1.33
SYNGR1-206ENST00000415332 ABTB2Q8N961 1025 aa23.36■■□□□ 1.33
SYNGR1-206ENST00000415332 STAC3Q96MF2 364 aa23.36■■□□□ 1.33
SYNGR1-206ENST00000415332 CCDC61Q9Y6R9 512 aa23.36■■□□□ 1.33
SYNGR1-206ENST00000415332 PLEKHG3A1L390 1219 aa23.35■■□□□ 1.33
SYNGR1-206ENST00000415332 USP19O94966 1318 aa23.34■■□□□ 1.33
SYNGR1-206ENST00000415332 SBF2Q86WG5 1849 aa23.34■■□□□ 1.33
SYNGR1-206ENST00000415332 CPDO75976 1380 aa23.34■■□□□ 1.33
SYNGR1-206ENST00000415332 NBPF14Q5TI25 921 aa23.33■■□□□ 1.33
SYNGR1-206ENST00000415332 PEAK1Q9H792 1746 aa23.32■■□□□ 1.32
SYNGR1-206ENST00000415332 COL5A2P05997 1499 aaPredicted RBP23.31■■□□□ 1.32
SYNGR1-206ENST00000415332 YY1P25490 414 aa23.31■■□□□ 1.32
SYNGR1-206ENST00000415332 KIAA1210Q9ULL0 1709 aa23.3■■□□□ 1.32
SYNGR1-206ENST00000415332 GCP02774 474 aa23.29■■□□□ 1.32
SYNGR1-206ENST00000415332 THRAP3Q9Y2W1 955 aaKnown RBP23.29■■□□□ 1.32
SYNGR1-206ENST00000415332 NBPF1Q3BBV0 1214 aa23.28■■□□□ 1.32
SYNGR1-206ENST00000415332 PPIP5K1Q6PFW1 1433 aa23.27■■□□□ 1.32
SYNGR1-206ENST00000415332 LRRC37A3O60309 1634 aa23.27■■□□□ 1.32
SYNGR1-206ENST00000415332 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
SYNGR1-206ENST00000415332 KCNQ2O43526 872 aa23.26■■□□□ 1.31
SYNGR1-206ENST00000415332 SPON1Q9HCB6 807 aa23.26■■□□□ 1.31
SYNGR1-206ENST00000415332 RGPD3A6NKT7 1758 aaPredicted RBP23.25■■□□□ 1.31
SYNGR1-206ENST00000415332 RGPD4Q7Z3J3 1758 aa23.25■■□□□ 1.31
SYNGR1-206ENST00000415332 ZBTB7CA1YPR0 619 aa23.25■■□□□ 1.31
SYNGR1-206ENST00000415332 PTF1AQ7RTS3 328 aa23.25■■□□□ 1.31
SYNGR1-206ENST00000415332 CABP2Q9NPB3 220 aa23.25■■□□□ 1.31
SYNGR1-206ENST00000415332 PPP1R1BQ9UD71 204 aaPredicted RBP23.25■■□□□ 1.31
SYNGR1-206ENST00000415332 CRB1P82279 1406 aa23.25■■□□□ 1.31
SYNGR1-206ENST00000415332 COL18A1P39060 1754 aa23.24■■□□□ 1.31
SYNGR1-206ENST00000415332 WNK3Q9BYP7 1800 aa23.24■■□□□ 1.31
SYNGR1-206ENST00000415332 SRPK2P78362 688 aaKnown RBP23.24■■□□□ 1.31
SYNGR1-206ENST00000415332 CASZ1Q86V15 1759 aa23.24■■□□□ 1.31
SYNGR1-206ENST00000415332 OVOS2A0A0G2JMS6 1433 aa23.23■■□□□ 1.31
SYNGR1-206ENST00000415332 OVOS2A0A0J9YW53 1432 aa23.23■■□□□ 1.31
SYNGR1-206ENST00000415332 OVOS2Q6IE36 1432 aa23.23■■□□□ 1.31
SYNGR1-206ENST00000415332 ANO8Q9HCE9 1232 aaPredicted RBP23.22■■□□□ 1.31
SYNGR1-206ENST00000415332 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
SYNGR1-206ENST00000415332 QRICH2Q9H0J4 1663 aa23.21■■□□□ 1.31
SYNGR1-206ENST00000415332 SLIT3O75094 1523 aa23.2■■□□□ 1.3
SYNGR1-206ENST00000415332 PDGFDQ9GZP0 370 aaPredicted RBP23.2■■□□□ 1.3
SYNGR1-206ENST00000415332 NINLQ9Y2I6 1382 aa23.19■■□□□ 1.3
SYNGR1-206ENST00000415332 PLSCR1O15162 318 aa23.19■■□□□ 1.3
SYNGR1-206ENST00000415332 NLRP6P59044 892 aa23.19■■□□□ 1.3
SYNGR1-206ENST00000415332 AKAP12Q02952 1782 aa23.19■■□□□ 1.3
SYNGR1-206ENST00000415332 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
SYNGR1-206ENST00000415332 USP6P35125 1406 aa23.18■■□□□ 1.3
SYNGR1-206ENST00000415332 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms