RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 QTRT2Q9H974 415 aaKnown RBP15.65■□□□□ 0.1
A1CF-208ENST00000414883 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
A1CF-208ENST00000414883 ACEP12821 1306 aa15.65■□□□□ 0.1
A1CF-208ENST00000414883 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
A1CF-208ENST00000414883 RXRBP28702 533 aa15.64■□□□□ 0.09
A1CF-208ENST00000414883 RGS12O14924 1447 aa15.63■□□□□ 0.09
A1CF-208ENST00000414883 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
A1CF-208ENST00000414883 USP21Q9UK80 565 aa15.63■□□□□ 0.09
A1CF-208ENST00000414883 NWD2Q9ULI1 1742 aa15.63■□□□□ 0.09
A1CF-208ENST00000414883 SBNO2Q9Y2G9 1366 aa15.62■□□□□ 0.09
A1CF-208ENST00000414883 PHRF1Q9P1Y6 1649 aaKnown RBP15.62■□□□□ 0.09
A1CF-208ENST00000414883 PCGF6Q9BYE7 350 aa15.62■□□□□ 0.09
A1CF-208ENST00000414883 NRAPQ86VF7 1730 aa15.61■□□□□ 0.09
A1CF-208ENST00000414883 RBM6P78332 1123 aaKnown RBP15.61■□□□□ 0.09
A1CF-208ENST00000414883 SRPK2P78362 688 aaKnown RBP15.61■□□□□ 0.09
A1CF-208ENST00000414883 LMOD2Q6P5Q4 547 aa15.61■□□□□ 0.09
A1CF-208ENST00000414883 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
A1CF-208ENST00000414883 AKAP12Q02952 1782 aa15.6■□□□□ 0.09
A1CF-208ENST00000414883 EVC2Q86UK5 1308 aa15.6■□□□□ 0.09
A1CF-208ENST00000414883 SSH2Q76I76 1423 aa15.6■□□□□ 0.09
A1CF-208ENST00000414883 GLI3P10071 1580 aa15.59■□□□□ 0.09
A1CF-208ENST00000414883 FAM83GA6ND36 823 aa15.59■□□□□ 0.09
A1CF-208ENST00000414883 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
A1CF-208ENST00000414883 TRPC5Q9UL62 973 aaPredicted RBP15.59■□□□□ 0.09
A1CF-208ENST00000414883 PLEKHG5O94827 1062 aa15.58■□□□□ 0.08
A1CF-208ENST00000414883 UNC5CLQ8IV45 518 aa15.58■□□□□ 0.08
A1CF-208ENST00000414883 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
A1CF-208ENST00000414883 CLSPNQ9HAW4 1339 aa15.58■□□□□ 0.08
A1CF-208ENST00000414883 COL14A1Q05707 1796 aaKnown RBP15.57■□□□□ 0.08
A1CF-208ENST00000414883 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
A1CF-208ENST00000414883 USP6P35125 1406 aa15.57■□□□□ 0.08
A1CF-208ENST00000414883 TESK2Q96S53 571 aa15.56■□□□□ 0.08
A1CF-208ENST00000414883 NRKQ7Z2Y5 1582 aa15.56■□□□□ 0.08
A1CF-208ENST00000414883 PIK3C2AO00443 1686 aa15.56■□□□□ 0.08
A1CF-208ENST00000414883 CPSF1Q10570 1443 aaKnown RBP15.55■□□□□ 0.08
A1CF-208ENST00000414883 USP19O94966 1318 aa15.55■□□□□ 0.08
A1CF-208ENST00000414883 CD163L1Q9NR16 1453 aa15.54■□□□□ 0.08
A1CF-208ENST00000414883 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
A1CF-208ENST00000414883 NUTM2GQ5VZR2 741 aa15.54■□□□□ 0.08
A1CF-208ENST00000414883 GJD4Q96KN9 370 aaPredicted RBP15.54■□□□□ 0.08
A1CF-208ENST00000414883 MON2Q7Z3U7 1717 aa15.54■□□□□ 0.08
A1CF-208ENST00000414883 ATAD2Q6PL18 1390 aa15.53■□□□□ 0.08
A1CF-208ENST00000414883 BRWD3Q6RI45 1802 aa15.53■□□□□ 0.08
A1CF-208ENST00000414883 HAP1P54257 671 aaPredicted RBP15.53■□□□□ 0.08
A1CF-208ENST00000414883 KIAA0232Q92628 1395 aa15.52■□□□□ 0.08
A1CF-208ENST00000414883 LMO7Q8WWI1 1683 aa15.52■□□□□ 0.08
A1CF-208ENST00000414883 VPS72Q15906 364 aa15.52■□□□□ 0.08
A1CF-208ENST00000414883 UPF1Q92900 1129 aaKnown RBP eCLIP15.52■□□□□ 0.08
A1CF-208ENST00000414883 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
A1CF-208ENST00000414883 SLIT3O75094 1523 aa15.52■□□□□ 0.07
A1CF-208ENST00000414883 ST20-MTHFSA0A0A6YYL1 179 aa15.51■□□□□ 0.07
A1CF-208ENST00000414883 ABTB2Q8N961 1025 aa15.51■□□□□ 0.07
A1CF-208ENST00000414883 SRCAPQ6ZRS2 3230 aa15.51■□□□□ 0.07
A1CF-208ENST00000414883 BTG4Q9NY30 223 aa15.5■□□□□ 0.07
A1CF-208ENST00000414883 CPDO75976 1380 aa15.49■□□□□ 0.07
A1CF-208ENST00000414883 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
A1CF-208ENST00000414883 TTC21BQ7Z4L5 1316 aa15.48■□□□□ 0.07
A1CF-208ENST00000414883 USP54Q70EL1 1684 aa15.48■□□□□ 0.07
A1CF-208ENST00000414883 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
A1CF-208ENST00000414883 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
A1CF-208ENST00000414883 ZC3H6P61129 1189 aaKnown RBP15.48■□□□□ 0.07
A1CF-208ENST00000414883 PUS7Q96PZ0 661 aaKnown RBP15.48■□□□□ 0.07
A1CF-208ENST00000414883 COL18A1P39060 1754 aa15.48■□□□□ 0.07
A1CF-208ENST00000414883 USP47Q96K76 1375 aa15.48■□□□□ 0.07
A1CF-208ENST00000414883 GCP02774 474 aa15.47■□□□□ 0.07
A1CF-208ENST00000414883 CHRNA2Q15822 529 aa15.47■□□□□ 0.07
A1CF-208ENST00000414883 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
A1CF-208ENST00000414883 PRDM11Q9NQV5 511 aa15.47■□□□□ 0.07
A1CF-208ENST00000414883 NLRP13Q86W25 1043 aa15.46■□□□□ 0.07
A1CF-208ENST00000414883 SLC12A5Q9H2X9 1139 aa15.46■□□□□ 0.07
A1CF-208ENST00000414883 THSD7AQ9UPZ6 1657 aa15.45■□□□□ 0.06
A1CF-208ENST00000414883 NFAT5O94916 1531 aa15.45■□□□□ 0.06
A1CF-208ENST00000414883 KTN1Q86UP2 1357 aaKnown RBP15.45■□□□□ 0.06
A1CF-208ENST00000414883 SPATA31A5Q5VU36 1347 aa15.44■□□□□ 0.06
A1CF-208ENST00000414883 SPATA31A7Q8IWB4 1347 aa15.44■□□□□ 0.06
A1CF-208ENST00000414883 NLRP6P59044 892 aa15.44■□□□□ 0.06
A1CF-208ENST00000414883 TTC21AQ8NDW8 1320 aa15.43■□□□□ 0.06
A1CF-208ENST00000414883 A0A1W2PP64 1363 aa15.43■□□□□ 0.06
A1CF-208ENST00000414883 RGPD5Q99666 1765 aa15.42■□□□□ 0.06
A1CF-208ENST00000414883 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
A1CF-208ENST00000414883 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
A1CF-208ENST00000414883 ZRANB1Q9UGI0 708 aa15.42■□□□□ 0.06
A1CF-208ENST00000414883 COL5A2P05997 1499 aaPredicted RBP15.41■□□□□ 0.06
A1CF-208ENST00000414883 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
A1CF-208ENST00000414883 EDC4Q6P2E9 1401 aaKnown RBP15.41■□□□□ 0.06
A1CF-208ENST00000414883 MYOM1P52179 1685 aa15.41■□□□□ 0.06
A1CF-208ENST00000414883 SPATA31A1Q5TZJ5 1347 aa15.41■□□□□ 0.06
A1CF-208ENST00000414883 AATKQ6ZMQ8 1374 aa15.4■□□□□ 0.06
A1CF-208ENST00000414883 FAM98CQ17RN3 349 aaKnown RBP15.4■□□□□ 0.06
A1CF-208ENST00000414883 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
A1CF-208ENST00000414883 NINLQ9Y2I6 1382 aa15.39■□□□□ 0.05
A1CF-208ENST00000414883 NME9Q86XW9 330 aa15.39■□□□□ 0.05
A1CF-208ENST00000414883 CCDC9Q9Y3X0 531 aaKnown RBP15.39■□□□□ 0.05
A1CF-208ENST00000414883 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
A1CF-208ENST00000414883 LARP1Q6PKG0 1096 aaKnown RBP15.38■□□□□ 0.05
A1CF-208ENST00000414883 ARHGEF25Q86VW2 580 aa15.38■□□□□ 0.05
A1CF-208ENST00000414883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.38■□□□□ 0.05
A1CF-208ENST00000414883 AXIN2Q9Y2T1 843 aa15.38■□□□□ 0.05
A1CF-208ENST00000414883 OVOS2A0A0J9YW53 1432 aa15.37■□□□□ 0.05
A1CF-208ENST00000414883 OVOS2Q6IE36 1432 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms