RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 CCDC61Q9Y6R9 512 aa24.09■■□□□ 1.45
SF1-207ENST00000413951 A0A0G2JS52 829 aa24.08■■□□□ 1.45
SF1-207ENST00000413951 MYT1Q01538 1121 aa24.08■■□□□ 1.45
SF1-207ENST00000413951 ITSN1Q15811 1721 aa24.07■■□□□ 1.44
SF1-207ENST00000413951 ARHGEF28Q8N1W1 1705 aaKnown RBP24.07■■□□□ 1.44
SF1-207ENST00000413951 ALS2Q96Q42 1657 aa24.07■■□□□ 1.44
SF1-207ENST00000413951 KIAA1210Q9ULL0 1709 aa24.07■■□□□ 1.44
SF1-207ENST00000413951 ATP7BP35670 1465 aa24.07■■□□□ 1.44
SF1-207ENST00000413951 PRDM11Q9NQV5 511 aa24.06■■□□□ 1.44
SF1-207ENST00000413951 COL14A1Q05707 1796 aaKnown RBP24.06■■□□□ 1.44
SF1-207ENST00000413951 EP400Q96L91 3159 aa24.03■■□□□ 1.44
SF1-207ENST00000413951 PLEKHG3A1L390 1219 aa24.03■■□□□ 1.44
SF1-207ENST00000413951 POLR3AO14802 1390 aaPredicted RBP24.03■■□□□ 1.44
SF1-207ENST00000413951 FAM98CQ17RN3 349 aaKnown RBP24.02■■□□□ 1.44
SF1-207ENST00000413951 NBPF8Q3BBV2 869 aa24.01■■□□□ 1.43
SF1-207ENST00000413951 ACEP12821 1306 aa24■■□□□ 1.43
SF1-207ENST00000413951 SPATA31A5Q5VU36 1347 aa24■■□□□ 1.43
SF1-207ENST00000413951 SPATA31A7Q8IWB4 1347 aa24■■□□□ 1.43
SF1-207ENST00000413951 SRPK2P78362 688 aaKnown RBP23.99■■□□□ 1.43
SF1-207ENST00000413951 CENPJQ9HC77 1338 aaPredicted RBP23.99■■□□□ 1.43
SF1-207ENST00000413951 BAG6P46379 1132 aa23.98■■□□□ 1.43
SF1-207ENST00000413951 NBPF1Q3BBV0 1214 aa23.98■■□□□ 1.43
SF1-207ENST00000413951 NRAPQ86VF7 1730 aa23.98■■□□□ 1.43
SF1-207ENST00000413951 BRD4O60885 1362 aaPredicted RBP23.97■■□□□ 1.43
SF1-207ENST00000413951 BRWD3Q6RI45 1802 aa23.97■■□□□ 1.43
SF1-207ENST00000413951 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
SF1-207ENST00000413951 ABTB2Q8N961 1025 aa23.96■■□□□ 1.43
SF1-207ENST00000413951 DEFB132Q7Z7B7 95 aa23.95■■□□□ 1.42
SF1-207ENST00000413951 EVA1CP58658 441 aa23.93■■□□□ 1.42
SF1-207ENST00000413951 NLRP13Q86W25 1043 aa23.93■■□□□ 1.42
SF1-207ENST00000413951 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
SF1-207ENST00000413951 CRYBG1Q9Y4K1 1723 aa23.92■■□□□ 1.42
SF1-207ENST00000413951 TOPAZ1Q8N9V7 1692 aa23.92■■□□□ 1.42
SF1-207ENST00000413951 PPIP5K1Q6PFW1 1433 aa23.92■■□□□ 1.42
SF1-207ENST00000413951 SPATA31A1Q5TZJ5 1347 aa23.91■■□□□ 1.42
SF1-207ENST00000413951 CHRNA2Q15822 529 aa23.9■■□□□ 1.42
SF1-207ENST00000413951 NUTM2GQ5VZR2 741 aa23.9■■□□□ 1.42
SF1-207ENST00000413951 L3MBTL2Q969R5 705 aa23.9■■□□□ 1.42
SF1-207ENST00000413951 STRN4Q9NRL3 753 aa23.9■■□□□ 1.42
SF1-207ENST00000413951 CPDO75976 1380 aa23.89■■□□□ 1.41
SF1-207ENST00000413951 CLSPNQ9HAW4 1339 aa23.88■■□□□ 1.41
SF1-207ENST00000413951 CABP2Q9NPB3 220 aa23.88■■□□□ 1.41
SF1-207ENST00000413951 PHRF1Q9P1Y6 1649 aaKnown RBP23.88■■□□□ 1.41
SF1-207ENST00000413951 EVC2Q86UK5 1308 aa23.87■■□□□ 1.41
SF1-207ENST00000413951 FAM196AQ6ZSG2 479 aa23.87■■□□□ 1.41
SF1-207ENST00000413951 USP19O94966 1318 aa23.86■■□□□ 1.41
SF1-207ENST00000413951 BARGINQ6ZT62 677 aa23.86■■□□□ 1.41
SF1-207ENST00000413951 GCP02774 474 aa23.85■■□□□ 1.41
SF1-207ENST00000413951 THSD7AQ9UPZ6 1657 aa23.84■■□□□ 1.41
SF1-207ENST00000413951 CABP1Q9NZU7 370 aa23.84■■□□□ 1.41
SF1-207ENST00000413951 THRAP3Q9Y2W1 955 aaKnown RBP23.84■■□□□ 1.41
SF1-207ENST00000413951 SSH2Q76I76 1423 aa23.84■■□□□ 1.41
SF1-207ENST00000413951 PDE3BQ13370 1112 aa23.83■■□□□ 1.41
SF1-207ENST00000413951 SIN3AQ96ST3 1273 aa23.83■■□□□ 1.41
SF1-207ENST00000413951 TCP11L2Q8N4U5 519 aa23.82■■□□□ 1.4
SF1-207ENST00000413951 ZNF692Q9BU19 519 aaPredicted RBP23.82■■□□□ 1.4
SF1-207ENST00000413951 USP35Q9P2H5 1018 aa23.82■■□□□ 1.4
SF1-207ENST00000413951 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
SF1-207ENST00000413951 C11orf95C9JLR9 678 aaPredicted RBP23.81■■□□□ 1.4
SF1-207ENST00000413951 DISP2A7MBM2 1401 aa23.81■■□□□ 1.4
SF1-207ENST00000413951 NRKQ7Z2Y5 1582 aa23.81■■□□□ 1.4
SF1-207ENST00000413951 RGPD1P0DJD0 1748 aa23.81■■□□□ 1.4
SF1-207ENST00000413951 SRCAPQ6ZRS2 3230 aa23.8■■□□□ 1.4
SF1-207ENST00000413951 QRICH2Q9H0J4 1663 aa23.8■■□□□ 1.4
SF1-207ENST00000413951 USP6P35125 1406 aa23.8■■□□□ 1.4
SF1-207ENST00000413951 NLRP6P59044 892 aa23.8■■□□□ 1.4
SF1-207ENST00000413951 NEUROD1Q13562 356 aa23.8■■□□□ 1.4
SF1-207ENST00000413951 EN1Q05925 392 aaPredicted RBP23.79■■□□□ 1.4
SF1-207ENST00000413951 FAM182BQ5T319 152 aa23.78■■□□□ 1.4
SF1-207ENST00000413951 LARP1Q6PKG0 1096 aaKnown RBP23.78■■□□□ 1.4
SF1-207ENST00000413951 PARD3Q8TEW0 1356 aa23.77■■□□□ 1.4
SF1-207ENST00000413951 CAMTA1Q9Y6Y1 1673 aa23.76■■□□□ 1.39
SF1-207ENST00000413951 KCNH5Q8NCM2 988 aa23.75■■□□□ 1.39
SF1-207ENST00000413951 AATKQ6ZMQ8 1374 aa23.75■■□□□ 1.39
SF1-207ENST00000413951 TRPM1Q7Z4N2 1603 aa23.74■■□□□ 1.39
SF1-207ENST00000413951 TRIM37O94972 964 aa23.74■■□□□ 1.39
SF1-207ENST00000413951 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
SF1-207ENST00000413951 CCER1Q8TC90 406 aaPredicted RBP23.73■■□□□ 1.39
SF1-207ENST00000413951 APBA3O96018 575 aa23.72■■□□□ 1.39
SF1-207ENST00000413951 TTC21AQ8NDW8 1320 aa23.72■■□□□ 1.39
SF1-207ENST00000413951 CRB1P82279 1406 aa23.72■■□□□ 1.39
SF1-207ENST00000413951 COL5A2P05997 1499 aaPredicted RBP23.72■■□□□ 1.39
SF1-207ENST00000413951 SLIT3O75094 1523 aa23.7■■□□□ 1.38
SF1-207ENST00000413951 ZBTB7CA1YPR0 619 aa23.7■■□□□ 1.38
SF1-207ENST00000413951 PSDA5PKW4 1024 aaPredicted RBP23.7■■□□□ 1.38
SF1-207ENST00000413951 EZH2Q15910 746 aaKnown RBP23.69■■□□□ 1.38
SF1-207ENST00000413951 CAMKK2Q96RR4 588 aa23.69■■□□□ 1.38
SF1-207ENST00000413951 LRP5O75197 1615 aa23.69■■□□□ 1.38
SF1-207ENST00000413951 TTC21BQ7Z4L5 1316 aa23.68■■□□□ 1.38
SF1-207ENST00000413951 TOM1L2Q6ZVM7 507 aa23.68■■□□□ 1.38
SF1-207ENST00000413951 CDCA7Q9BWT1 371 aaPredicted RBP23.68■■□□□ 1.38
SF1-207ENST00000413951 SBNO2Q9Y2G9 1366 aa23.67■■□□□ 1.38
SF1-207ENST00000413951 TONSLQ96HA7 1378 aa23.66■■□□□ 1.38
SF1-207ENST00000413951 NBPF14Q5TI25 921 aa23.66■■□□□ 1.38
SF1-207ENST00000413951 TNS1Q9HBL0 1735 aaKnown RBP23.66■■□□□ 1.38
SF1-207ENST00000413951 R3HDM1Q15032 1099 aaKnown RBP23.65■■□□□ 1.38
SF1-207ENST00000413951 CARD11Q9BXL7 1154 aa23.65■■□□□ 1.38
SF1-207ENST00000413951 KTN1Q86UP2 1357 aaKnown RBP23.65■■□□□ 1.38
SF1-207ENST00000413951 WDR17Q8IZU2 1322 aa23.64■■□□□ 1.38
SF1-207ENST00000413951 DDB1Q16531 1140 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms