RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 VPS72Q15906 364 aa24.07■■□□□ 1.44
COL6A2-205ENST00000413758 CABP2Q9NPB3 220 aa24.07■■□□□ 1.44
COL6A2-205ENST00000413758 ROCK2O75116 1388 aaKnown RBP24.06■■□□□ 1.44
COL6A2-205ENST00000413758 NBPF8Q3BBV2 869 aa24.06■■□□□ 1.44
COL6A2-205ENST00000413758 NUTM2GQ5VZR2 741 aa24.06■■□□□ 1.44
COL6A2-205ENST00000413758 QRICH2Q9H0J4 1663 aa24.05■■□□□ 1.44
COL6A2-205ENST00000413758 BTG4Q9NY30 223 aa24.05■■□□□ 1.44
COL6A2-205ENST00000413758 NWD2Q9ULI1 1742 aa24.04■■□□□ 1.44
COL6A2-205ENST00000413758 GLI3P10071 1580 aa24.04■■□□□ 1.44
COL6A2-205ENST00000413758 A0A0G2JS52 829 aa24.04■■□□□ 1.44
COL6A2-205ENST00000413758 PLEKHG3A1L390 1219 aa24.04■■□□□ 1.44
COL6A2-205ENST00000413758 MYT1Q01538 1121 aa24.04■■□□□ 1.44
COL6A2-205ENST00000413758 TOPAZ1Q8N9V7 1692 aa24.04■■□□□ 1.44
COL6A2-205ENST00000413758 TRPM1Q7Z4N2 1603 aa24.03■■□□□ 1.44
COL6A2-205ENST00000413758 PRDM11Q9NQV5 511 aa24.03■■□□□ 1.44
COL6A2-205ENST00000413758 POLR3AO14802 1390 aaPredicted RBP24.03■■□□□ 1.44
COL6A2-205ENST00000413758 PPIP5K1Q6PFW1 1433 aa24.02■■□□□ 1.44
COL6A2-205ENST00000413758 TRIM26Q12899 539 aaPredicted RBP24.01■■□□□ 1.43
COL6A2-205ENST00000413758 SEPT12Q8IYM1 358 aa24.01■■□□□ 1.43
COL6A2-205ENST00000413758 COL14A1Q05707 1796 aaKnown RBP24.01■■□□□ 1.43
COL6A2-205ENST00000413758 ABTB2Q8N961 1025 aa24■■□□□ 1.43
COL6A2-205ENST00000413758 EVC2Q86UK5 1308 aa24■■□□□ 1.43
COL6A2-205ENST00000413758 TONSLQ96HA7 1378 aa23.98■■□□□ 1.43
COL6A2-205ENST00000413758 ZC3H6P61129 1189 aaKnown RBP23.97■■□□□ 1.43
COL6A2-205ENST00000413758 CABP1Q9NZU7 370 aa23.97■■□□□ 1.43
COL6A2-205ENST00000413758 CRYBG1Q9Y4K1 1723 aa23.96■■□□□ 1.43
COL6A2-205ENST00000413758 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
COL6A2-205ENST00000413758 CHRNA2Q15822 529 aa23.96■■□□□ 1.43
COL6A2-205ENST00000413758 FAM98CQ17RN3 349 aaKnown RBP23.95■■□□□ 1.42
COL6A2-205ENST00000413758 NRAPQ86VF7 1730 aa23.95■■□□□ 1.42
COL6A2-205ENST00000413758 CCDC125Q86Z20 511 aa23.94■■□□□ 1.42
COL6A2-205ENST00000413758 PHRF1Q9P1Y6 1649 aaKnown RBP23.93■■□□□ 1.42
COL6A2-205ENST00000413758 NLRP13Q86W25 1043 aa23.93■■□□□ 1.42
COL6A2-205ENST00000413758 STRN4Q9NRL3 753 aa23.93■■□□□ 1.42
COL6A2-205ENST00000413758 BRWD3Q6RI45 1802 aa23.93■■□□□ 1.42
COL6A2-205ENST00000413758 KRT27Q7Z3Y8 459 aa23.92■■□□□ 1.42
COL6A2-205ENST00000413758 CARD11Q9BXL7 1154 aa23.92■■□□□ 1.42
COL6A2-205ENST00000413758 ONECUT3O60422 494 aaPredicted RBP23.91■■□□□ 1.42
COL6A2-205ENST00000413758 EVA1CP58658 441 aa23.9■■□□□ 1.42
COL6A2-205ENST00000413758 SF3B2Q13435 895 aaKnown RBP23.9■■□□□ 1.42
COL6A2-205ENST00000413758 SPATA31A5Q5VU36 1347 aa23.89■■□□□ 1.42
COL6A2-205ENST00000413758 SPATA31A7Q8IWB4 1347 aa23.89■■□□□ 1.42
COL6A2-205ENST00000413758 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.41
COL6A2-205ENST00000413758 BRD4O60885 1362 aaPredicted RBP23.88■■□□□ 1.41
COL6A2-205ENST00000413758 USP6P35125 1406 aa23.87■■□□□ 1.41
COL6A2-205ENST00000413758 NLRP6P59044 892 aa23.87■■□□□ 1.41
COL6A2-205ENST00000413758 USP19O94966 1318 aa23.85■■□□□ 1.41
COL6A2-205ENST00000413758 BLMP54132 1417 aaPredicted RBP23.85■■□□□ 1.41
COL6A2-205ENST00000413758 GCP02774 474 aa23.85■■□□□ 1.41
COL6A2-205ENST00000413758 NRKQ7Z2Y5 1582 aa23.85■■□□□ 1.41
COL6A2-205ENST00000413758 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
COL6A2-205ENST00000413758 SPATA31A1Q5TZJ5 1347 aa23.83■■□□□ 1.4
COL6A2-205ENST00000413758 ZNF692Q9BU19 519 aaPredicted RBP23.82■■□□□ 1.4
COL6A2-205ENST00000413758 ZRANB1Q9UGI0 708 aa23.82■■□□□ 1.4
COL6A2-205ENST00000413758 CPDO75976 1380 aa23.81■■□□□ 1.4
COL6A2-205ENST00000413758 SSH2Q76I76 1423 aa23.79■■□□□ 1.4
COL6A2-205ENST00000413758 FAM182BQ5T319 152 aa23.79■■□□□ 1.4
COL6A2-205ENST00000413758 DEFB132Q7Z7B7 95 aa23.79■■□□□ 1.4
COL6A2-205ENST00000413758 EP400Q96L91 3159 aa23.79■■□□□ 1.4
COL6A2-205ENST00000413758 TTC21BQ7Z4L5 1316 aa23.79■■□□□ 1.4
COL6A2-205ENST00000413758 LARP1Q6PKG0 1096 aaKnown RBP23.78■■□□□ 1.4
COL6A2-205ENST00000413758 TMC1Q8TDI8 760 aa23.78■■□□□ 1.4
COL6A2-205ENST00000413758 KTN1Q86UP2 1357 aaKnown RBP23.78■■□□□ 1.4
COL6A2-205ENST00000413758 CAMTA1Q9Y6Y1 1673 aa23.77■■□□□ 1.4
COL6A2-205ENST00000413758 SOX12O15370 315 aa23.77■■□□□ 1.4
COL6A2-205ENST00000413758 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
COL6A2-205ENST00000413758 PIK3C2AO00443 1686 aa23.75■■□□□ 1.39
COL6A2-205ENST00000413758 THSD7AQ9UPZ6 1657 aa23.75■■□□□ 1.39
COL6A2-205ENST00000413758 TTC21AQ8NDW8 1320 aa23.75■■□□□ 1.39
COL6A2-205ENST00000413758 AKAP12Q02952 1782 aa23.75■■□□□ 1.39
COL6A2-205ENST00000413758 BAG6P46379 1132 aa23.74■■□□□ 1.39
COL6A2-205ENST00000413758 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
COL6A2-205ENST00000413758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.73■■□□□ 1.39
COL6A2-205ENST00000413758 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
COL6A2-205ENST00000413758 SLIT3O75094 1523 aa23.73■■□□□ 1.39
COL6A2-205ENST00000413758 PDE3BQ13370 1112 aa23.72■■□□□ 1.39
COL6A2-205ENST00000413758 BARGINQ6ZT62 677 aa23.72■■□□□ 1.39
COL6A2-205ENST00000413758 HDGFL2Q7Z4V5 671 aaPredicted RBP23.72■■□□□ 1.39
COL6A2-205ENST00000413758 KCNH5Q8NCM2 988 aa23.72■■□□□ 1.39
COL6A2-205ENST00000413758 CPSF1Q10570 1443 aaKnown RBP23.72■■□□□ 1.39
COL6A2-205ENST00000413758 COL5A2P05997 1499 aaPredicted RBP23.7■■□□□ 1.38
COL6A2-205ENST00000413758 AATKQ6ZMQ8 1374 aa23.7■■□□□ 1.38
COL6A2-205ENST00000413758 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
COL6A2-205ENST00000413758 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
COL6A2-205ENST00000413758 FAM196AQ6ZSG2 479 aa23.68■■□□□ 1.38
COL6A2-205ENST00000413758 TOM1L2Q6ZVM7 507 aa23.68■■□□□ 1.38
COL6A2-205ENST00000413758 SLC12A5Q9H2X9 1139 aa23.68■■□□□ 1.38
COL6A2-205ENST00000413758 THRAP3Q9Y2W1 955 aaKnown RBP23.68■■□□□ 1.38
COL6A2-205ENST00000413758 TERF2IPQ9NYB0 399 aa23.67■■□□□ 1.38
COL6A2-205ENST00000413758 CRB1P82279 1406 aa23.67■■□□□ 1.38
COL6A2-205ENST00000413758 RGPD1P0DJD0 1748 aa23.65■■□□□ 1.38
COL6A2-205ENST00000413758 MON2Q7Z3U7 1717 aa23.65■■□□□ 1.38
COL6A2-205ENST00000413758 CSB-PGBD3P0DP91 1061 aa23.65■■□□□ 1.38
COL6A2-205ENST00000413758 ARHGEF25Q86VW2 580 aa23.65■■□□□ 1.38
COL6A2-205ENST00000413758 NME9Q86XW9 330 aa23.65■■□□□ 1.38
COL6A2-205ENST00000413758 TRIM37O94972 964 aa23.64■■□□□ 1.37
COL6A2-205ENST00000413758 EN1Q05925 392 aaPredicted RBP23.64■■□□□ 1.37
COL6A2-205ENST00000413758 SLC24A1O60721 1099 aa23.63■■□□□ 1.37
COL6A2-205ENST00000413758 AXIN2Q9Y2T1 843 aa23.63■■□□□ 1.37
COL6A2-205ENST00000413758 PUS7Q96PZ0 661 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms