RNA–Protein interactions for RNA: ENST00000413402.5

LINC00378-201, long intergenic non-protein coding RNA 378, humanhuman

TSL 5 BASIC

Gene LINC00378, Length 403 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00378-201ENST00000413402 ABCA3Q99758 1704 aa15.24■□□□□ 0.03
LINC00378-201ENST00000413402 SRPK2P78362 688 aaKnown RBP15.24■□□□□ 0.03
LINC00378-201ENST00000413402 ITSN1Q15811 1721 aa15.23■□□□□ 0.03
LINC00378-201ENST00000413402 TRPM3Q9HCF6 1732 aaPredicted RBP15.23■□□□□ 0.03
LINC00378-201ENST00000413402 BRWD3Q6RI45 1802 aa15.23■□□□□ 0.03
LINC00378-201ENST00000413402 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
LINC00378-201ENST00000413402 EVA1CP58658 441 aa15.23■□□□□ 0.03
LINC00378-201ENST00000413402 DEFB132Q7Z7B7 95 aa15.23■□□□□ 0.03
LINC00378-201ENST00000413402 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
LINC00378-201ENST00000413402 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
LINC00378-201ENST00000413402 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
LINC00378-201ENST00000413402 ACEP12821 1306 aa15.22■□□□□ 0.03
LINC00378-201ENST00000413402 COL14A1Q05707 1796 aaKnown RBP15.22■□□□□ 0.03
LINC00378-201ENST00000413402 ZC3H6P61129 1189 aaKnown RBP15.22■□□□□ 0.03
LINC00378-201ENST00000413402 NBPF1Q3BBV0 1214 aa15.22■□□□□ 0.03
LINC00378-201ENST00000413402 BAG6P46379 1132 aa15.21■□□□□ 0.03
LINC00378-201ENST00000413402 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
LINC00378-201ENST00000413402 NBPF8Q3BBV2 869 aa15.21■□□□□ 0.03
LINC00378-201ENST00000413402 ABTB2Q8N961 1025 aa15.21■□□□□ 0.03
LINC00378-201ENST00000413402 ALS2Q96Q42 1657 aa15.21■□□□□ 0.03
LINC00378-201ENST00000413402 CENPJQ9HC77 1338 aaPredicted RBP15.19■□□□□ 0.02
LINC00378-201ENST00000413402 NEUROD1Q13562 356 aa15.19■□□□□ 0.02
LINC00378-201ENST00000413402 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
LINC00378-201ENST00000413402 ATP7BP35670 1465 aa15.19■□□□□ 0.02
LINC00378-201ENST00000413402 SPATA31A5Q5VU36 1347 aa15.18■□□□□ 0.02
LINC00378-201ENST00000413402 SPATA31A7Q8IWB4 1347 aa15.18■□□□□ 0.02
LINC00378-201ENST00000413402 ZBTB7CA1YPR0 619 aa15.18■□□□□ 0.02
LINC00378-201ENST00000413402 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
LINC00378-201ENST00000413402 KIAA0232Q92628 1395 aa15.18■□□□□ 0.02
LINC00378-201ENST00000413402 KIAA1210Q9ULL0 1709 aa15.17■□□□□ 0.02
LINC00378-201ENST00000413402 PLEKHG3A1L390 1219 aa15.17■□□□□ 0.02
LINC00378-201ENST00000413402 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
LINC00378-201ENST00000413402 NLRP13Q86W25 1043 aa15.16■□□□□ 0.02
LINC00378-201ENST00000413402 NRAPQ86VF7 1730 aa15.16■□□□□ 0.02
LINC00378-201ENST00000413402 L3MBTL2Q969R5 705 aa15.15■□□□□ 0.02
LINC00378-201ENST00000413402 PPIP5K1Q6PFW1 1433 aa15.15■□□□□ 0.02
LINC00378-201ENST00000413402 POLR3AO14802 1390 aaPredicted RBP15.14■□□□□ 0.01
LINC00378-201ENST00000413402 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
LINC00378-201ENST00000413402 EN1Q05925 392 aaPredicted RBP15.13■□□□□ 0.01
LINC00378-201ENST00000413402 SIN3AQ96ST3 1273 aa15.13■□□□□ 0.01
LINC00378-201ENST00000413402 CABP1Q9NZU7 370 aa15.13■□□□□ 0.01
LINC00378-201ENST00000413402 SPATA31A1Q5TZJ5 1347 aa15.13■□□□□ 0.01
LINC00378-201ENST00000413402 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
LINC00378-201ENST00000413402 PHRF1Q9P1Y6 1649 aaKnown RBP15.11■□□□□ 0.01
LINC00378-201ENST00000413402 PSDA5PKW4 1024 aaPredicted RBP15.11■□□□□ 0.01
LINC00378-201ENST00000413402 NLRP6P59044 892 aa15.11■□□□□ 0.01
LINC00378-201ENST00000413402 FAM196AQ6ZSG2 479 aa15.11■□□□□ 0.01
LINC00378-201ENST00000413402 CRYBG1Q9Y4K1 1723 aa15.11■□□□□ 0.01
LINC00378-201ENST00000413402 TOPAZ1Q8N9V7 1692 aa15.1■□□□□ 0.01
LINC00378-201ENST00000413402 TRIM37O94972 964 aa15.1■□□□□ 0.01
LINC00378-201ENST00000413402 GCP02774 474 aa15.1■□□□□ 0.01
LINC00378-201ENST00000413402 QRICH2Q9H0J4 1663 aa15.09■□□□□ 0.01
LINC00378-201ENST00000413402 LARP1Q6PKG0 1096 aaKnown RBP15.09■□□□□ 0.01
LINC00378-201ENST00000413402 TCP11L2Q8N4U5 519 aa15.09■□□□□ 0.01
LINC00378-201ENST00000413402 ROCK2O75116 1388 aaKnown RBP15.09■□□□□ 0.01
LINC00378-201ENST00000413402 APBA3O96018 575 aa15.08■□□□□ 0
LINC00378-201ENST00000413402 RGPD1P0DJD0 1748 aa15.08■□□□□ 0
LINC00378-201ENST00000413402 SSH2Q76I76 1423 aa15.08■□□□□ 0
LINC00378-201ENST00000413402 BARGINQ6ZT62 677 aa15.07■□□□□ 0
LINC00378-201ENST00000413402 BRD4O60885 1362 aaPredicted RBP15.07■□□□□ 0
LINC00378-201ENST00000413402 EZH2Q15910 746 aaKnown RBP15.06■□□□□ 0
LINC00378-201ENST00000413402 USP19O94966 1318 aa15.06■□□□□ 0
LINC00378-201ENST00000413402 SRCAPQ6ZRS2 3230 aa15.06■□□□□ 0
LINC00378-201ENST00000413402 SOX12O15370 315 aa15.05■□□□□ -0
LINC00378-201ENST00000413402 R3HDM1Q15032 1099 aaKnown RBP15.05■□□□□ -0
LINC00378-201ENST00000413402 TOM1L2Q6ZVM7 507 aa15.05■□□□□ -0
LINC00378-201ENST00000413402 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
LINC00378-201ENST00000413402 THRAP3Q9Y2W1 955 aaKnown RBP15.05■□□□□ -0
LINC00378-201ENST00000413402 CPDO75976 1380 aa15.05■□□□□ -0
LINC00378-201ENST00000413402 THSD7AQ9UPZ6 1657 aa15.05■□□□□ -0
LINC00378-201ENST00000413402 CAMTA1Q9Y6Y1 1673 aa15.04■□□□□ -0
LINC00378-201ENST00000413402 NRKQ7Z2Y5 1582 aa15.04■□□□□ -0
LINC00378-201ENST00000413402 CSB-PGBD3P0DP91 1061 aa15.04■□□□□ -0
LINC00378-201ENST00000413402 USP6P35125 1406 aa15.03■□□□□ -0
LINC00378-201ENST00000413402 NBPF14Q5TI25 921 aa15.02■□□□□ -0
LINC00378-201ENST00000413402 KCNH5Q8NCM2 988 aa15.02■□□□□ -0
LINC00378-201ENST00000413402 TRPM1Q7Z4N2 1603 aa15.02□□□□□ -0.01
LINC00378-201ENST00000413402 EP400Q96L91 3159 aa15.01□□□□□ -0.01
LINC00378-201ENST00000413402 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
LINC00378-201ENST00000413402 CARD11Q9BXL7 1154 aa15.01□□□□□ -0.01
LINC00378-201ENST00000413402 CRB1P82279 1406 aa15□□□□□ -0.01
LINC00378-201ENST00000413402 TTC21BQ7Z4L5 1316 aa15□□□□□ -0.01
LINC00378-201ENST00000413402 DDB1Q16531 1140 aa15□□□□□ -0.01
LINC00378-201ENST00000413402 TMC1Q8TDI8 760 aa15□□□□□ -0.01
LINC00378-201ENST00000413402 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
LINC00378-201ENST00000413402 KTN1Q86UP2 1357 aaKnown RBP14.99□□□□□ -0.01
LINC00378-201ENST00000413402 COL5A2P05997 1499 aaPredicted RBP14.99□□□□□ -0.01
LINC00378-201ENST00000413402 AATKQ6ZMQ8 1374 aa14.98□□□□□ -0.01
LINC00378-201ENST00000413402 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
LINC00378-201ENST00000413402 TTC21AQ8NDW8 1320 aa14.98□□□□□ -0.01
LINC00378-201ENST00000413402 LMO7Q8WWI1 1683 aa14.98□□□□□ -0.01
LINC00378-201ENST00000413402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
LINC00378-201ENST00000413402 DISP2A7MBM2 1401 aa14.98□□□□□ -0.01
LINC00378-201ENST00000413402 PARD3Q8TEW0 1356 aa14.98□□□□□ -0.01
LINC00378-201ENST00000413402 TNS1Q9HBL0 1735 aaKnown RBP14.97□□□□□ -0.01
LINC00378-201ENST00000413402 HDGFL2Q7Z4V5 671 aaPredicted RBP14.97□□□□□ -0.01
LINC00378-201ENST00000413402 WDR17Q8IZU2 1322 aa14.95□□□□□ -0.02
LINC00378-201ENST00000413402 CDCA7Q9BWT1 371 aaPredicted RBP14.95□□□□□ -0.02
LINC00378-201ENST00000413402 AXIN2Q9Y2T1 843 aa14.95□□□□□ -0.02
LINC00378-201ENST00000413402 SLIT3O75094 1523 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms