RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 RGS12O14924 1447 aa14.45□□□□□ -0.1
NCKIPSD-202ENST00000413374 ATRNO75882 1429 aa14.45□□□□□ -0.1
NCKIPSD-202ENST00000413374 ZC3H6P61129 1189 aaKnown RBP14.45□□□□□ -0.1
NCKIPSD-202ENST00000413374 BTG4Q9NY30 223 aa14.45□□□□□ -0.1
NCKIPSD-202ENST00000413374 CHRNA2Q15822 529 aa14.44□□□□□ -0.1
NCKIPSD-202ENST00000413374 POLR3AO14802 1390 aaPredicted RBP14.43□□□□□ -0.1
NCKIPSD-202ENST00000413374 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
NCKIPSD-202ENST00000413374 ZBTB7CA1YPR0 619 aa14.42□□□□□ -0.1
NCKIPSD-202ENST00000413374 PRDM11Q9NQV5 511 aa14.42□□□□□ -0.1
NCKIPSD-202ENST00000413374 SLIT2O94813 1529 aa14.41□□□□□ -0.1
NCKIPSD-202ENST00000413374 VPS72Q15906 364 aa14.41□□□□□ -0.1
NCKIPSD-202ENST00000413374 TMC1Q8TDI8 760 aa14.41□□□□□ -0.1
NCKIPSD-202ENST00000413374 CDK12Q9NYV4 1490 aaPredicted RBP14.4□□□□□ -0.1
NCKIPSD-202ENST00000413374 A0A0G2JS52 829 aa14.4□□□□□ -0.1
NCKIPSD-202ENST00000413374 NLRP6P59044 892 aa14.4□□□□□ -0.1
NCKIPSD-202ENST00000413374 MYT1Q01538 1121 aa14.4□□□□□ -0.1
NCKIPSD-202ENST00000413374 NLRP13Q86W25 1043 aa14.4□□□□□ -0.1
NCKIPSD-202ENST00000413374 STRN4Q9NRL3 753 aa14.4□□□□□ -0.1
NCKIPSD-202ENST00000413374 KIAA0232Q92628 1395 aa14.39□□□□□ -0.11
NCKIPSD-202ENST00000413374 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
NCKIPSD-202ENST00000413374 SEPT12Q8IYM1 358 aa14.39□□□□□ -0.11
NCKIPSD-202ENST00000413374 RALGAPBQ86X10 1494 aa14.38□□□□□ -0.11
NCKIPSD-202ENST00000413374 TRPM3Q9HCF6 1732 aaPredicted RBP14.38□□□□□ -0.11
NCKIPSD-202ENST00000413374 CCER1Q8TC90 406 aaPredicted RBP14.38□□□□□ -0.11
NCKIPSD-202ENST00000413374 QRICH2Q9H0J4 1663 aa14.38□□□□□ -0.11
NCKIPSD-202ENST00000413374 SOX12O15370 315 aa14.37□□□□□ -0.11
NCKIPSD-202ENST00000413374 GCP02774 474 aa14.37□□□□□ -0.11
NCKIPSD-202ENST00000413374 EVA1CP58658 441 aa14.37□□□□□ -0.11
NCKIPSD-202ENST00000413374 FAM98CQ17RN3 349 aaKnown RBP14.37□□□□□ -0.11
NCKIPSD-202ENST00000413374 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
NCKIPSD-202ENST00000413374 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
NCKIPSD-202ENST00000413374 TTC21BQ7Z4L5 1316 aa14.36□□□□□ -0.11
NCKIPSD-202ENST00000413374 USP6P35125 1406 aa14.35□□□□□ -0.11
NCKIPSD-202ENST00000413374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.35□□□□□ -0.11
NCKIPSD-202ENST00000413374 USP35Q9P2H5 1018 aa14.35□□□□□ -0.11
NCKIPSD-202ENST00000413374 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
NCKIPSD-202ENST00000413374 ALS2Q96Q42 1657 aa14.35□□□□□ -0.11
NCKIPSD-202ENST00000413374 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
NCKIPSD-202ENST00000413374 ITSN1Q15811 1721 aa14.33□□□□□ -0.12
NCKIPSD-202ENST00000413374 ONECUT3O60422 494 aaPredicted RBP14.33□□□□□ -0.12
NCKIPSD-202ENST00000413374 TESK2Q96S53 571 aa14.33□□□□□ -0.12
NCKIPSD-202ENST00000413374 USP19O94966 1318 aa14.33□□□□□ -0.12
NCKIPSD-202ENST00000413374 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
NCKIPSD-202ENST00000413374 TOPAZ1Q8N9V7 1692 aa14.33□□□□□ -0.12
NCKIPSD-202ENST00000413374 GLI3P10071 1580 aa14.32□□□□□ -0.12
NCKIPSD-202ENST00000413374 KRT27Q7Z3Y8 459 aa14.32□□□□□ -0.12
NCKIPSD-202ENST00000413374 SPATA31A5Q5VU36 1347 aa14.32□□□□□ -0.12
NCKIPSD-202ENST00000413374 SPATA31A7Q8IWB4 1347 aa14.32□□□□□ -0.12
NCKIPSD-202ENST00000413374 MARF1Q9Y4F3 1742 aaKnown RBP14.32□□□□□ -0.12
NCKIPSD-202ENST00000413374 FAM182BQ5T319 152 aa14.31□□□□□ -0.12
NCKIPSD-202ENST00000413374 LARP1Q6PKG0 1096 aaKnown RBP14.31□□□□□ -0.12
NCKIPSD-202ENST00000413374 HDGFL2Q7Z4V5 671 aaPredicted RBP14.31□□□□□ -0.12
NCKIPSD-202ENST00000413374 BRD4O60885 1362 aaPredicted RBP14.31□□□□□ -0.12
NCKIPSD-202ENST00000413374 SBNO2Q9Y2G9 1366 aa14.31□□□□□ -0.12
NCKIPSD-202ENST00000413374 SSH2Q76I76 1423 aa14.31□□□□□ -0.12
NCKIPSD-202ENST00000413374 NME9Q86XW9 330 aa14.3□□□□□ -0.12
NCKIPSD-202ENST00000413374 TIMELESSQ9UNS1 1208 aa14.3□□□□□ -0.12
NCKIPSD-202ENST00000413374 ABCA3Q99758 1704 aa14.29□□□□□ -0.12
NCKIPSD-202ENST00000413374 SPATA31A1Q5TZJ5 1347 aa14.29□□□□□ -0.12
NCKIPSD-202ENST00000413374 CPSF1Q10570 1443 aaKnown RBP14.29□□□□□ -0.12
NCKIPSD-202ENST00000413374 PLCH1Q4KWH8 1693 aa14.28□□□□□ -0.12
NCKIPSD-202ENST00000413374 TTC21AQ8NDW8 1320 aa14.28□□□□□ -0.12
NCKIPSD-202ENST00000413374 USP47Q96K76 1375 aa14.28□□□□□ -0.12
NCKIPSD-202ENST00000413374 CLSPNQ9HAW4 1339 aa14.28□□□□□ -0.12
NCKIPSD-202ENST00000413374 TERF2IPQ9NYB0 399 aa14.28□□□□□ -0.12
NCKIPSD-202ENST00000413374 AXIN2Q9Y2T1 843 aa14.28□□□□□ -0.12
NCKIPSD-202ENST00000413374 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.12
NCKIPSD-202ENST00000413374 CPDO75976 1380 aa14.27□□□□□ -0.12
NCKIPSD-202ENST00000413374 TMF1P82094 1093 aa14.27□□□□□ -0.13
NCKIPSD-202ENST00000413374 KCNH5Q8NCM2 988 aa14.27□□□□□ -0.13
NCKIPSD-202ENST00000413374 PUS7Q96PZ0 661 aaKnown RBP14.26□□□□□ -0.13
NCKIPSD-202ENST00000413374 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.26□□□□□ -0.13
NCKIPSD-202ENST00000413374 SLC24A1O60721 1099 aa14.25□□□□□ -0.13
NCKIPSD-202ENST00000413374 DEFB132Q7Z7B7 95 aa14.25□□□□□ -0.13
NCKIPSD-202ENST00000413374 ARHGEF25Q86VW2 580 aa14.25□□□□□ -0.13
NCKIPSD-202ENST00000413374 CAMTA1Q9Y6Y1 1673 aa14.25□□□□□ -0.13
NCKIPSD-202ENST00000413374 CD163L1Q9NR16 1453 aa14.25□□□□□ -0.13
NCKIPSD-202ENST00000413374 PHRF1Q9P1Y6 1649 aaKnown RBP14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 SF3B2Q13435 895 aaKnown RBP14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 CCDC125Q86Z20 511 aa14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 TCP11L2Q8N4U5 519 aa14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 POLR3GLQ9BT43 218 aa14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 NRKQ7Z2Y5 1582 aa14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 NWD2Q9ULI1 1742 aa14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 CRYBG1Q9Y4K1 1723 aa14.24□□□□□ -0.13
NCKIPSD-202ENST00000413374 A0A1W2PP64 1363 aa14.23□□□□□ -0.13
NCKIPSD-202ENST00000413374 AATKQ6ZMQ8 1374 aa14.22□□□□□ -0.13
NCKIPSD-202ENST00000413374 FBLN1P23142 703 aa14.22□□□□□ -0.13
NCKIPSD-202ENST00000413374 PDE3BQ13370 1112 aa14.22□□□□□ -0.13
NCKIPSD-202ENST00000413374 NRAPQ86VF7 1730 aa14.21□□□□□ -0.13
NCKIPSD-202ENST00000413374 BARGINQ6ZT62 677 aa14.21□□□□□ -0.13
NCKIPSD-202ENST00000413374 SLIT3O75094 1523 aa14.2□□□□□ -0.14
NCKIPSD-202ENST00000413374 USP31Q70CQ4 1352 aa14.2□□□□□ -0.14
NCKIPSD-202ENST00000413374 PIK3C2AO00443 1686 aa14.2□□□□□ -0.14
NCKIPSD-202ENST00000413374 COL5A2P05997 1499 aaPredicted RBP14.19□□□□□ -0.14
NCKIPSD-202ENST00000413374 BLMP54132 1417 aaPredicted RBP14.19□□□□□ -0.14
NCKIPSD-202ENST00000413374 EDC4Q6P2E9 1401 aaKnown RBP14.19□□□□□ -0.14
NCKIPSD-202ENST00000413374 CDCA8Q53HL2 280 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms