RNA–Protein interactions for RNA: ENST00000412710.1

CUBNP1-201, Transcript of cubilin pseudogene 1, humanhuman

BASIC

Gene CUBNP1, Length 1,790 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP1-201ENST00000412710 A0A1W2PP64 1363 aa11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 SMC5Q8IY18 1101 aa11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 REREQ9P2R6 1566 aa11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 U2AF1L5P0DN76 240 aaPredicted RBP11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 TMPOP42166 694 aaKnown RBP11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 U2AF1Q01081 240 aaKnown RBP eCLIP11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 ALDH1L2Q3SY69 923 aa11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 RRP7AQ9Y3A4 280 aaKnown RBP11.44□□□□□ -0.58
CUBNP1-201ENST00000412710 DLC1Q96QB1 1528 aa11.43□□□□□ -0.58
CUBNP1-201ENST00000412710 KIF16BQ96L93 1317 aa11.43□□□□□ -0.58
CUBNP1-201ENST00000412710 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
CUBNP1-201ENST00000412710 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
CUBNP1-201ENST00000412710 TMEM132EQ6IEE7 984 aa11.43□□□□□ -0.58
CUBNP1-201ENST00000412710 TERF2IPQ9NYB0 399 aa11.43□□□□□ -0.58
CUBNP1-201ENST00000412710 RICTORQ6R327 1708 aa11.43□□□□□ -0.58
CUBNP1-201ENST00000412710 PREX1Q8TCU6 1659 aa11.42□□□□□ -0.58
CUBNP1-201ENST00000412710 KIF20BQ96Q89 1820 aa11.42□□□□□ -0.58
CUBNP1-201ENST00000412710 L1TD1Q5T7N2 865 aaKnown RBP11.42□□□□□ -0.58
CUBNP1-201ENST00000412710 ATF7IPQ6VMQ6 1270 aa11.42□□□□□ -0.58
CUBNP1-201ENST00000412710 FAM43AQ8N2R8 423 aa11.42□□□□□ -0.58
CUBNP1-201ENST00000412710 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
CUBNP1-201ENST00000412710 IPO8O15397 1037 aaKnown RBP11.41□□□□□ -0.58
CUBNP1-201ENST00000412710 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
CUBNP1-201ENST00000412710 FTSJ3Q8IY81 847 aaKnown RBP11.41□□□□□ -0.58
CUBNP1-201ENST00000412710 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
CUBNP1-201ENST00000412710 CHMP4BQ9H444 224 aaKnown RBP11.41□□□□□ -0.58
CUBNP1-201ENST00000412710 BRPF3Q9ULD4 1205 aa11.41□□□□□ -0.58
CUBNP1-201ENST00000412710 ARHGEF40Q8TER5 1519 aa11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 PIK3R4Q99570 1358 aa11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 NCOA3Q9Y6Q9 1424 aa11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 ATP7BP35670 1465 aa11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 TRIM27P14373 513 aa11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 TNNT2P45379 298 aaPredicted RBP11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 GGT6Q6P531 493 aa11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 ZBTB40Q9NUA8 1239 aa11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 TNNQ9UQP3 1299 aa11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 CFAP65Q6ZU64 1925 aaKnown RBP11.4□□□□□ -0.58
CUBNP1-201ENST00000412710 YTHDC2Q9H6S0 1430 aaKnown RBP11.4□□□□□ -0.59
CUBNP1-201ENST00000412710 FCHSD2O94868 740 aa11.39□□□□□ -0.59
CUBNP1-201ENST00000412710 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
CUBNP1-201ENST00000412710 FYB1O15117 783 aa11.39□□□□□ -0.59
CUBNP1-201ENST00000412710 EXOSC9Q06265 439 aaKnown RBP11.39□□□□□ -0.59
CUBNP1-201ENST00000412710 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
CUBNP1-201ENST00000412710 ARHGAP45Q92619 1136 aa11.39□□□□□ -0.59
CUBNP1-201ENST00000412710 CHMP5Q9NZZ3 219 aa11.39□□□□□ -0.59
CUBNP1-201ENST00000412710 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
CUBNP1-201ENST00000412710 EIF5BO60841 1220 aaKnown RBP11.38□□□□□ -0.59
CUBNP1-201ENST00000412710 RBM25P49756 843 aaKnown RBP11.38□□□□□ -0.59
CUBNP1-201ENST00000412710 SNX21Q969T3 373 aa11.38□□□□□ -0.59
CUBNP1-201ENST00000412710 C22orf23Q9BZE7 217 aa11.38□□□□□ -0.59
CUBNP1-201ENST00000412710 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
CUBNP1-201ENST00000412710 ISY1Q9ULR0 285 aaKnown RBP11.38□□□□□ -0.59
CUBNP1-201ENST00000412710 ALKQ9UM73 1620 aa11.37□□□□□ -0.59
CUBNP1-201ENST00000412710 DIAPH1O60610 1272 aaKnown RBP11.37□□□□□ -0.59
CUBNP1-201ENST00000412710 NUCB1Q02818 461 aa11.37□□□□□ -0.59
CUBNP1-201ENST00000412710 CALD1Q05682 793 aaKnown RBP11.37□□□□□ -0.59
CUBNP1-201ENST00000412710 IDI1Q13907 227 aa11.37□□□□□ -0.59
CUBNP1-201ENST00000412710 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
CUBNP1-201ENST00000412710 MYO5BQ9ULV0 1848 aa11.37□□□□□ -0.59
CUBNP1-201ENST00000412710 FSD2A1L4K1 749 aa11.36□□□□□ -0.59
CUBNP1-201ENST00000412710 HDGFL2Q7Z4V5 671 aaPredicted RBP11.36□□□□□ -0.59
CUBNP1-201ENST00000412710 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
CUBNP1-201ENST00000412710 KIF24Q5T7B8 1368 aa11.36□□□□□ -0.59
CUBNP1-201ENST00000412710 LRRC7Q96NW7 1537 aa11.36□□□□□ -0.59
CUBNP1-201ENST00000412710 MCM4P33991 863 aa11.36□□□□□ -0.59
CUBNP1-201ENST00000412710 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
CUBNP1-201ENST00000412710 HOXD11P31277 338 aaPredicted RBP11.35□□□□□ -0.59
CUBNP1-201ENST00000412710 DDIT3P35638 169 aa11.35□□□□□ -0.59
CUBNP1-201ENST00000412710 TSR2Q969E8 191 aaKnown RBP11.35□□□□□ -0.59
CUBNP1-201ENST00000412710 POGKQ9P215 609 aa11.35□□□□□ -0.59
CUBNP1-201ENST00000412710 RIPK4P57078 832 aa11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 SRPK2P78362 688 aaKnown RBP11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 NOB1Q9ULX3 412 aaKnown RBP11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 AGLP35573 1532 aa11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 CDK12Q9NYV4 1490 aaPredicted RBP11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 YEATS2Q9ULM3 1422 aa11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 AATKQ6ZMQ8 1374 aa11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 SETD1AO15047 1707 aaKnown RBP11.34□□□□□ -0.59
CUBNP1-201ENST00000412710 PTMSP20962 102 aa11.33□□□□□ -0.59
CUBNP1-201ENST00000412710 ITPRIPQ8IWB1 547 aa11.33□□□□□ -0.59
CUBNP1-201ENST00000412710 TMEM57Q8N5G2 664 aa11.33□□□□□ -0.59
CUBNP1-201ENST00000412710 GCC1Q96CN9 775 aa11.33□□□□□ -0.59
CUBNP1-201ENST00000412710 SLKQ9H2G2 1235 aaPredicted RBP11.33□□□□□ -0.59
CUBNP1-201ENST00000412710 DDX11L8A8MPP1 907 aa11.33□□□□□ -0.6
CUBNP1-201ENST00000412710 U2SURPO15042 1029 aaKnown RBP11.33□□□□□ -0.6
CUBNP1-201ENST00000412710 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
CUBNP1-201ENST00000412710 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
CUBNP1-201ENST00000412710 RSPH6AQ9H0K4 717 aa11.33□□□□□ -0.6
CUBNP1-201ENST00000412710 GGNBP2Q9H3C7 697 aa11.33□□□□□ -0.6
CUBNP1-201ENST00000412710 CPSF1Q10570 1443 aaKnown RBP11.32□□□□□ -0.6
CUBNP1-201ENST00000412710 ZNF853P0CG23 659 aa11.31□□□□□ -0.6
CUBNP1-201ENST00000412710 NFE2L2Q16236 605 aa11.31□□□□□ -0.6
CUBNP1-201ENST00000412710 CHD1LQ86WJ1 897 aa11.31□□□□□ -0.6
CUBNP1-201ENST00000412710 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
CUBNP1-201ENST00000412710 PRAM1Q96QH2 718 aa11.31□□□□□ -0.6
CUBNP1-201ENST00000412710 IFT57Q9NWB7 429 aa11.31□□□□□ -0.6
CUBNP1-201ENST00000412710 EDC4Q6P2E9 1401 aaKnown RBP11.31□□□□□ -0.6
CUBNP1-201ENST00000412710 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms