RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 PNISRQ8TF01 805 aaKnown RBP15.61■□□□□ 0.09
SNRNP35-202ENST00000412157 XIRP1Q702N8 1843 aaKnown RBP15.6■□□□□ 0.09
SNRNP35-202ENST00000412157 MAP2P11137 1827 aaKnown RBP15.59■□□□□ 0.09
SNRNP35-202ENST00000412157 GGNBP2Q9H3C7 697 aa15.59■□□□□ 0.09
SNRNP35-202ENST00000412157 USP6P35125 1406 aa15.59■□□□□ 0.09
SNRNP35-202ENST00000412157 KIF1AQ12756 1690 aa15.58■□□□□ 0.08
SNRNP35-202ENST00000412157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNRNP35-202ENST00000412157 ACEP12821 1306 aa15.58■□□□□ 0.08
SNRNP35-202ENST00000412157 NCOA3Q9Y6Q9 1424 aa15.58■□□□□ 0.08
SNRNP35-202ENST00000412157 FYB1O15117 783 aa15.57■□□□□ 0.08
SNRNP35-202ENST00000412157 POLR3AO14802 1390 aaPredicted RBP15.57■□□□□ 0.08
SNRNP35-202ENST00000412157 SHPRHQ149N8 1683 aa15.57■□□□□ 0.08
SNRNP35-202ENST00000412157 TNNT2P45379 298 aaPredicted RBP15.56■□□□□ 0.08
SNRNP35-202ENST00000412157 WDR43Q15061 677 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNRNP35-202ENST00000412157 NGDNQ8NEJ9 315 aaKnown RBP15.56■□□□□ 0.08
SNRNP35-202ENST00000412157 RGS17Q9UGC6 210 aaPredicted RBP15.56■□□□□ 0.08
SNRNP35-202ENST00000412157 INSRP06213 1382 aa15.56■□□□□ 0.08
SNRNP35-202ENST00000412157 DCCP43146 1447 aa15.55■□□□□ 0.08
SNRNP35-202ENST00000412157 TMEM94Q12767 1356 aa15.55■□□□□ 0.08
SNRNP35-202ENST00000412157 RBM33Q96EV2 1170 aaKnown RBP15.55■□□□□ 0.08
SNRNP35-202ENST00000412157 CFAP53Q96M91 514 aa15.55■□□□□ 0.08
SNRNP35-202ENST00000412157 USP54Q70EL1 1684 aa15.54■□□□□ 0.08
SNRNP35-202ENST00000412157 ROBO1Q9Y6N7 1651 aa15.54■□□□□ 0.08
SNRNP35-202ENST00000412157 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
SNRNP35-202ENST00000412157 TTC21BQ7Z4L5 1316 aa15.53■□□□□ 0.08
SNRNP35-202ENST00000412157 TTC21AQ8NDW8 1320 aa15.53■□□□□ 0.08
SNRNP35-202ENST00000412157 BLMP54132 1417 aaPredicted RBP15.52■□□□□ 0.08
SNRNP35-202ENST00000412157 PIK3C2AO00443 1686 aa15.52■□□□□ 0.08
SNRNP35-202ENST00000412157 NME9Q86XW9 330 aa15.52■□□□□ 0.08
SNRNP35-202ENST00000412157 COG3Q96JB2 828 aa15.52■□□□□ 0.08
SNRNP35-202ENST00000412157 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
SNRNP35-202ENST00000412157 ZBED9Q6R2W3 1325 aa15.51■□□□□ 0.07
SNRNP35-202ENST00000412157 C19orf44Q9H6X5 657 aa15.51■□□□□ 0.07
SNRNP35-202ENST00000412157 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
SNRNP35-202ENST00000412157 MSH6P52701 1360 aa15.5■□□□□ 0.07
SNRNP35-202ENST00000412157 MTHFSP49914 203 aa15.5■□□□□ 0.07
SNRNP35-202ENST00000412157 OVOS2A0A0J9YW53 1432 aa15.5■□□□□ 0.07
SNRNP35-202ENST00000412157 OVOS2Q6IE36 1432 aa15.5■□□□□ 0.07
SNRNP35-202ENST00000412157 ATF3P18847 181 aa15.49■□□□□ 0.07
SNRNP35-202ENST00000412157 POTEAQ6S8J7 498 aa15.49■□□□□ 0.07
SNRNP35-202ENST00000412157 MARF1Q9Y4F3 1742 aaKnown RBP15.48■□□□□ 0.07
SNRNP35-202ENST00000412157 C1orf167Q5SNV9 1468 aa15.48■□□□□ 0.07
SNRNP35-202ENST00000412157 ESCO1Q5FWF5 840 aa15.48■□□□□ 0.07
SNRNP35-202ENST00000412157 AATKQ6ZMQ8 1374 aa15.48■□□□□ 0.07
SNRNP35-202ENST00000412157 PHLPP1O60346 1717 aa15.47■□□□□ 0.07
SNRNP35-202ENST00000412157 MST1RQ04912 1400 aa15.47■□□□□ 0.07
SNRNP35-202ENST00000412157 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.07
SNRNP35-202ENST00000412157 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.07
SNRNP35-202ENST00000412157 TRPM3Q9HCF6 1732 aaPredicted RBP15.46■□□□□ 0.07
SNRNP35-202ENST00000412157 SMG6Q86US8 1419 aaKnown RBP15.46■□□□□ 0.07
SNRNP35-202ENST00000412157 CADPS2Q86UW7 1296 aa15.46■□□□□ 0.07
SNRNP35-202ENST00000412157 ADAMTS8Q9UP79 889 aa15.46■□□□□ 0.07
SNRNP35-202ENST00000412157 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
SNRNP35-202ENST00000412157 ZRANB1Q9UGI0 708 aa15.45■□□□□ 0.06
SNRNP35-202ENST00000412157 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
SNRNP35-202ENST00000412157 PSME1Q06323 249 aa15.43■□□□□ 0.06
SNRNP35-202ENST00000412157 LTN1O94822 1766 aa15.42■□□□□ 0.06
SNRNP35-202ENST00000412157 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
SNRNP35-202ENST00000412157 ORAI2Q96SN7 254 aa15.42■□□□□ 0.06
SNRNP35-202ENST00000412157 JCADQ9P266 1359 aa15.41■□□□□ 0.06
SNRNP35-202ENST00000412157 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
SNRNP35-202ENST00000412157 MEX3CQ5U5Q3 659 aaKnown RBP15.41■□□□□ 0.06
SNRNP35-202ENST00000412157 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
SNRNP35-202ENST00000412157 PNPLA6Q8IY17 1366 aa15.4■□□□□ 0.06
SNRNP35-202ENST00000412157 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
SNRNP35-202ENST00000412157 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
SNRNP35-202ENST00000412157 SLAIN2Q9P270 581 aa15.4■□□□□ 0.06
SNRNP35-202ENST00000412157 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
SNRNP35-202ENST00000412157 PEAK1Q9H792 1746 aa15.4■□□□□ 0.06
SNRNP35-202ENST00000412157 NLRP6P59044 892 aa15.39■□□□□ 0.05
SNRNP35-202ENST00000412157 U2SURPO15042 1029 aaKnown RBP15.38■□□□□ 0.05
SNRNP35-202ENST00000412157 U2AF1L5P0DN76 240 aaPredicted RBP15.38■□□□□ 0.05
SNRNP35-202ENST00000412157 U2AF1Q01081 240 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNRNP35-202ENST00000412157 CCDC146Q8IYE0 955 aa15.38■□□□□ 0.05
SNRNP35-202ENST00000412157 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
SNRNP35-202ENST00000412157 COL16A1Q07092 1604 aaPredicted RBP15.37■□□□□ 0.05
SNRNP35-202ENST00000412157 FOXO3O43524 673 aa15.37■□□□□ 0.05
SNRNP35-202ENST00000412157 RRS1Q15050 365 aaKnown RBP15.37■□□□□ 0.05
SNRNP35-202ENST00000412157 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 FBLN1P23142 703 aa15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 PDE3BQ13370 1112 aa15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 KRT28Q7Z3Y7 464 aa15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 NGEFQ8N5V2 710 aa15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 PNNQ9H307 717 aaKnown RBP15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 SALL2Q9Y467 1007 aaPredicted RBP15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 NPHP3Q7Z494 1330 aa15.36■□□□□ 0.05
SNRNP35-202ENST00000412157 SLIT3O75094 1523 aa15.35■□□□□ 0.05
SNRNP35-202ENST00000412157 SOX12O15370 315 aa15.35■□□□□ 0.05
SNRNP35-202ENST00000412157 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
SNRNP35-202ENST00000412157 SBNO1A3KN83 1393 aa15.35■□□□□ 0.05
SNRNP35-202ENST00000412157 NFAT5O94916 1531 aa15.34■□□□□ 0.05
SNRNP35-202ENST00000412157 NUTM2GQ5VZR2 741 aa15.34■□□□□ 0.05
SNRNP35-202ENST00000412157 LRP6O75581 1613 aa15.34■□□□□ 0.05
SNRNP35-202ENST00000412157 NHSL1Q5SYE7 1610 aa15.34■□□□□ 0.05
SNRNP35-202ENST00000412157 FLT4P35916 1363 aa15.34■□□□□ 0.05
SNRNP35-202ENST00000412157 KIF24Q5T7B8 1368 aa15.34■□□□□ 0.05
SNRNP35-202ENST00000412157 RGPD1P0DJD0 1748 aa15.34■□□□□ 0.05
SNRNP35-202ENST00000412157 APAF1O14727 1248 aa15.33■□□□□ 0.04
SNRNP35-202ENST00000412157 XPCQ01831 940 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms