RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 ROCK2O75116 1388 aaKnown RBP16.6■□□□□ 0.25
LINC00963-201ENST00000412141 RALGAPBQ86X10 1494 aa16.59■□□□□ 0.25
LINC00963-201ENST00000412141 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
LINC00963-201ENST00000412141 A0A0G2JS52 829 aa16.58■□□□□ 0.24
LINC00963-201ENST00000412141 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
LINC00963-201ENST00000412141 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.24
LINC00963-201ENST00000412141 MYT1Q01538 1121 aa16.58■□□□□ 0.24
LINC00963-201ENST00000412141 VPS72Q15906 364 aa16.58■□□□□ 0.24
LINC00963-201ENST00000412141 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
LINC00963-201ENST00000412141 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.58■□□□□ 0.24
LINC00963-201ENST00000412141 GLI3P10071 1580 aa16.57■□□□□ 0.24
LINC00963-201ENST00000412141 CHRNA2Q15822 529 aa16.57■□□□□ 0.24
LINC00963-201ENST00000412141 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
LINC00963-201ENST00000412141 CABP1Q9NZU7 370 aa16.57■□□□□ 0.24
LINC00963-201ENST00000412141 PPIP5K1Q6PFW1 1433 aa16.56■□□□□ 0.24
LINC00963-201ENST00000412141 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
LINC00963-201ENST00000412141 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
LINC00963-201ENST00000412141 ITSN1Q15811 1721 aa16.55■□□□□ 0.24
LINC00963-201ENST00000412141 ABCA3Q99758 1704 aa16.55■□□□□ 0.24
LINC00963-201ENST00000412141 POLR3AO14802 1390 aaPredicted RBP16.54■□□□□ 0.24
LINC00963-201ENST00000412141 TONSLQ96HA7 1378 aa16.54■□□□□ 0.24
LINC00963-201ENST00000412141 EVC2Q86UK5 1308 aa16.54■□□□□ 0.24
LINC00963-201ENST00000412141 KIAA0232Q92628 1395 aa16.53■□□□□ 0.24
LINC00963-201ENST00000412141 PLCH1Q4KWH8 1693 aa16.53■□□□□ 0.24
LINC00963-201ENST00000412141 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
LINC00963-201ENST00000412141 TRPM1Q7Z4N2 1603 aa16.53■□□□□ 0.24
LINC00963-201ENST00000412141 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
LINC00963-201ENST00000412141 FAM98CQ17RN3 349 aaKnown RBP16.53■□□□□ 0.24
LINC00963-201ENST00000412141 CARD11Q9BXL7 1154 aa16.53■□□□□ 0.24
LINC00963-201ENST00000412141 STRN4Q9NRL3 753 aa16.53■□□□□ 0.24
LINC00963-201ENST00000412141 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
LINC00963-201ENST00000412141 USP35Q9P2H5 1018 aa16.49■□□□□ 0.23
LINC00963-201ENST00000412141 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
LINC00963-201ENST00000412141 EVA1CP58658 441 aa16.48■□□□□ 0.23
LINC00963-201ENST00000412141 NLRP6P59044 892 aa16.48■□□□□ 0.23
LINC00963-201ENST00000412141 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
LINC00963-201ENST00000412141 NLRP13Q86W25 1043 aa16.48■□□□□ 0.23
LINC00963-201ENST00000412141 CCDC125Q86Z20 511 aa16.48■□□□□ 0.23
LINC00963-201ENST00000412141 COL14A1Q05707 1796 aaKnown RBP16.47■□□□□ 0.23
LINC00963-201ENST00000412141 ONECUT3O60422 494 aaPredicted RBP16.47■□□□□ 0.23
LINC00963-201ENST00000412141 FAM182BQ5T319 152 aa16.47■□□□□ 0.23
LINC00963-201ENST00000412141 SPATA31A5Q5VU36 1347 aa16.46■□□□□ 0.23
LINC00963-201ENST00000412141 SPATA31A7Q8IWB4 1347 aa16.46■□□□□ 0.23
LINC00963-201ENST00000412141 SOX12O15370 315 aa16.46■□□□□ 0.23
LINC00963-201ENST00000412141 GCP02774 474 aa16.46■□□□□ 0.23
LINC00963-201ENST00000412141 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
LINC00963-201ENST00000412141 BRWD3Q6RI45 1802 aa16.46■□□□□ 0.23
LINC00963-201ENST00000412141 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
LINC00963-201ENST00000412141 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
LINC00963-201ENST00000412141 TMC1Q8TDI8 760 aa16.45■□□□□ 0.22
LINC00963-201ENST00000412141 PCGF6Q9BYE7 350 aa16.45■□□□□ 0.22
LINC00963-201ENST00000412141 NRAPQ86VF7 1730 aa16.45■□□□□ 0.22
LINC00963-201ENST00000412141 USP6P35125 1406 aa16.45■□□□□ 0.22
LINC00963-201ENST00000412141 DEFB132Q7Z7B7 95 aa16.44■□□□□ 0.22
LINC00963-201ENST00000412141 PHRF1Q9P1Y6 1649 aaKnown RBP16.44■□□□□ 0.22
LINC00963-201ENST00000412141 USP19O94966 1318 aa16.44■□□□□ 0.22
LINC00963-201ENST00000412141 SF3B2Q13435 895 aaKnown RBP16.43■□□□□ 0.22
LINC00963-201ENST00000412141 LARP1Q6PKG0 1096 aaKnown RBP16.43■□□□□ 0.22
LINC00963-201ENST00000412141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC00963-201ENST00000412141 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
LINC00963-201ENST00000412141 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
LINC00963-201ENST00000412141 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
LINC00963-201ENST00000412141 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
LINC00963-201ENST00000412141 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
LINC00963-201ENST00000412141 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
LINC00963-201ENST00000412141 CAMTA1Q9Y6Y1 1673 aa16.39■□□□□ 0.21
LINC00963-201ENST00000412141 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
LINC00963-201ENST00000412141 CPDO75976 1380 aa16.38■□□□□ 0.21
LINC00963-201ENST00000412141 SSH2Q76I76 1423 aa16.38■□□□□ 0.21
LINC00963-201ENST00000412141 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
LINC00963-201ENST00000412141 TCP11L2Q8N4U5 519 aa16.36■□□□□ 0.21
LINC00963-201ENST00000412141 PDE3BQ13370 1112 aa16.35■□□□□ 0.21
LINC00963-201ENST00000412141 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
LINC00963-201ENST00000412141 NME9Q86XW9 330 aa16.35■□□□□ 0.21
LINC00963-201ENST00000412141 SBNO2Q9Y2G9 1366 aa16.35■□□□□ 0.21
LINC00963-201ENST00000412141 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
LINC00963-201ENST00000412141 PIK3C2AO00443 1686 aa16.34■□□□□ 0.21
LINC00963-201ENST00000412141 TOM1L2Q6ZVM7 507 aa16.34■□□□□ 0.21
LINC00963-201ENST00000412141 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
LINC00963-201ENST00000412141 TTC21AQ8NDW8 1320 aa16.34■□□□□ 0.21
LINC00963-201ENST00000412141 TESK2Q96S53 571 aa16.33■□□□□ 0.2
LINC00963-201ENST00000412141 TRIM37O94972 964 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 BAG6P46379 1132 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 EN1Q05925 392 aaPredicted RBP16.32■□□□□ 0.2
LINC00963-201ENST00000412141 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 BARGINQ6ZT62 677 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 THSD7AQ9UPZ6 1657 aa16.32■□□□□ 0.2
LINC00963-201ENST00000412141 LMO7Q8WWI1 1683 aa16.31■□□□□ 0.2
LINC00963-201ENST00000412141 SLIT3O75094 1523 aa16.31■□□□□ 0.2
LINC00963-201ENST00000412141 COL5A2P05997 1499 aaPredicted RBP16.31■□□□□ 0.2
LINC00963-201ENST00000412141 AKAP12Q02952 1782 aa16.31■□□□□ 0.2
LINC00963-201ENST00000412141 FAM196AQ6ZSG2 479 aa16.3■□□□□ 0.2
LINC00963-201ENST00000412141 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
LINC00963-201ENST00000412141 CRB1P82279 1406 aa16.28■□□□□ 0.2
LINC00963-201ENST00000412141 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
LINC00963-201ENST00000412141 USP47Q96K76 1375 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms