RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
BRCC3-207ENST00000411985 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.3
BRCC3-207ENST00000411985 RXRBP28702 533 aa13.14□□□□□ -0.31
BRCC3-207ENST00000411985 NBPF8Q3BBV2 869 aa13.14□□□□□ -0.31
BRCC3-207ENST00000411985 NGDNQ8NEJ9 315 aaKnown RBP13.14□□□□□ -0.31
BRCC3-207ENST00000411985 USP21Q9UK80 565 aa13.14□□□□□ -0.31
BRCC3-207ENST00000411985 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
BRCC3-207ENST00000411985 SLIT2O94813 1529 aa13.13□□□□□ -0.31
BRCC3-207ENST00000411985 NRKQ7Z2Y5 1582 aa13.13□□□□□ -0.31
BRCC3-207ENST00000411985 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
BRCC3-207ENST00000411985 POLR3AO14802 1390 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-207ENST00000411985 LMOD2Q6P5Q4 547 aa13.13□□□□□ -0.31
BRCC3-207ENST00000411985 FNBP4Q8N3X1 1017 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-207ENST00000411985 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
BRCC3-207ENST00000411985 RGS12O14924 1447 aa13.13□□□□□ -0.31
BRCC3-207ENST00000411985 ATRNO75882 1429 aa13.13□□□□□ -0.31
BRCC3-207ENST00000411985 GLI3P10071 1580 aa13.12□□□□□ -0.31
BRCC3-207ENST00000411985 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
BRCC3-207ENST00000411985 SRPK2P78362 688 aaKnown RBP13.12□□□□□ -0.31
BRCC3-207ENST00000411985 CCDC61Q9Y6R9 512 aa13.12□□□□□ -0.31
BRCC3-207ENST00000411985 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
BRCC3-207ENST00000411985 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
BRCC3-207ENST00000411985 TRPC5Q9UL62 973 aaPredicted RBP13.11□□□□□ -0.31
BRCC3-207ENST00000411985 EP400Q96L91 3159 aa13.1□□□□□ -0.31
BRCC3-207ENST00000411985 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
BRCC3-207ENST00000411985 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
BRCC3-207ENST00000411985 CABP2Q9NPB3 220 aa13.1□□□□□ -0.31
BRCC3-207ENST00000411985 ACEP12821 1306 aa13.1□□□□□ -0.31
BRCC3-207ENST00000411985 EVC2Q86UK5 1308 aa13.1□□□□□ -0.31
BRCC3-207ENST00000411985 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
BRCC3-207ENST00000411985 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
BRCC3-207ENST00000411985 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
BRCC3-207ENST00000411985 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
BRCC3-207ENST00000411985 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.32
BRCC3-207ENST00000411985 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
BRCC3-207ENST00000411985 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
BRCC3-207ENST00000411985 UNC5CLQ8IV45 518 aa13.06□□□□□ -0.32
BRCC3-207ENST00000411985 LTN1O94822 1766 aa13.06□□□□□ -0.32
BRCC3-207ENST00000411985 BRD4O60885 1362 aaPredicted RBP13.06□□□□□ -0.32
BRCC3-207ENST00000411985 USP6P35125 1406 aa13.05□□□□□ -0.32
BRCC3-207ENST00000411985 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
BRCC3-207ENST00000411985 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
BRCC3-207ENST00000411985 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
BRCC3-207ENST00000411985 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
BRCC3-207ENST00000411985 ATAD2Q6PL18 1390 aa13.04□□□□□ -0.32
BRCC3-207ENST00000411985 SLIT3O75094 1523 aa13.03□□□□□ -0.32
BRCC3-207ENST00000411985 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
BRCC3-207ENST00000411985 COL18A1P39060 1754 aa13.02□□□□□ -0.32
BRCC3-207ENST00000411985 FAM83GA6ND36 823 aa13.02□□□□□ -0.33
BRCC3-207ENST00000411985 ABTB2Q8N961 1025 aa13.02□□□□□ -0.33
BRCC3-207ENST00000411985 THSD7AQ9UPZ6 1657 aa13.02□□□□□ -0.33
BRCC3-207ENST00000411985 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
BRCC3-207ENST00000411985 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
BRCC3-207ENST00000411985 KIF20BQ96Q89 1820 aa13.01□□□□□ -0.33
BRCC3-207ENST00000411985 MYOM1P52179 1685 aa13□□□□□ -0.33
BRCC3-207ENST00000411985 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
BRCC3-207ENST00000411985 KIAA0232Q92628 1395 aa13□□□□□ -0.33
BRCC3-207ENST00000411985 USP19O94966 1318 aa13□□□□□ -0.33
BRCC3-207ENST00000411985 VPS72Q15906 364 aa13□□□□□ -0.33
BRCC3-207ENST00000411985 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
BRCC3-207ENST00000411985 BTG4Q9NY30 223 aa13□□□□□ -0.33
BRCC3-207ENST00000411985 CD163L1Q9NR16 1453 aa12.99□□□□□ -0.33
BRCC3-207ENST00000411985 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
BRCC3-207ENST00000411985 PRDM11Q9NQV5 511 aa12.99□□□□□ -0.33
BRCC3-207ENST00000411985 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
BRCC3-207ENST00000411985 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
BRCC3-207ENST00000411985 KTN1Q86UP2 1357 aaKnown RBP12.98□□□□□ -0.33
BRCC3-207ENST00000411985 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
BRCC3-207ENST00000411985 CCDC9Q9Y3X0 531 aaKnown RBP12.98□□□□□ -0.33
BRCC3-207ENST00000411985 PARP4Q9UKK3 1724 aaKnown RBP12.98□□□□□ -0.33
BRCC3-207ENST00000411985 CAMTA1Q9Y6Y1 1673 aa12.98□□□□□ -0.33
BRCC3-207ENST00000411985 CPDO75976 1380 aa12.97□□□□□ -0.33
BRCC3-207ENST00000411985 ZC3H6P61129 1189 aaKnown RBP12.97□□□□□ -0.33
BRCC3-207ENST00000411985 USP47Q96K76 1375 aa12.96□□□□□ -0.33
BRCC3-207ENST00000411985 ST20-MTHFSA0A0A6YYL1 179 aa12.96□□□□□ -0.33
BRCC3-207ENST00000411985 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
BRCC3-207ENST00000411985 TTC21AQ8NDW8 1320 aa12.95□□□□□ -0.34
BRCC3-207ENST00000411985 NFAT5O94916 1531 aa12.95□□□□□ -0.34
BRCC3-207ENST00000411985 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
BRCC3-207ENST00000411985 NLRP6P59044 892 aa12.95□□□□□ -0.34
BRCC3-207ENST00000411985 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
BRCC3-207ENST00000411985 PUS7Q96PZ0 661 aaKnown RBP12.95□□□□□ -0.34
BRCC3-207ENST00000411985 TESK2Q96S53 571 aa12.95□□□□□ -0.34
BRCC3-207ENST00000411985 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
BRCC3-207ENST00000411985 ABCC6O95255 1503 aa12.94□□□□□ -0.34
BRCC3-207ENST00000411985 COL5A2P05997 1499 aaPredicted RBP12.94□□□□□ -0.34
BRCC3-207ENST00000411985 ONECUT3O60422 494 aaPredicted RBP12.94□□□□□ -0.34
BRCC3-207ENST00000411985 GCP02774 474 aa12.94□□□□□ -0.34
BRCC3-207ENST00000411985 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
BRCC3-207ENST00000411985 SBF2Q86WG5 1849 aa12.94□□□□□ -0.34
BRCC3-207ENST00000411985 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
BRCC3-207ENST00000411985 SPATA31A5Q5VU36 1347 aa12.93□□□□□ -0.34
BRCC3-207ENST00000411985 SPATA31A7Q8IWB4 1347 aa12.93□□□□□ -0.34
BRCC3-207ENST00000411985 FAM208AQ9UK61 1670 aaKnown RBP12.93□□□□□ -0.34
BRCC3-207ENST00000411985 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
BRCC3-207ENST00000411985 TMC1Q8TDI8 760 aa12.93□□□□□ -0.34
BRCC3-207ENST00000411985 EDC4Q6P2E9 1401 aaKnown RBP12.93□□□□□ -0.34
BRCC3-207ENST00000411985 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
BRCC3-207ENST00000411985 LRRC37A3O60309 1634 aa12.92□□□□□ -0.34
BRCC3-207ENST00000411985 HDGFL2Q7Z4V5 671 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms