RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 RALGAPBQ86X10 1494 aa14.44□□□□□ -0.1
PKP4-203ENST00000411900 FAM83GA6ND36 823 aa14.44□□□□□ -0.1
PKP4-203ENST00000411900 SRPK2P78362 688 aaKnown RBP14.44□□□□□ -0.1
PKP4-203ENST00000411900 NUTM2GQ5VZR2 741 aa14.44□□□□□ -0.1
PKP4-203ENST00000411900 CABP2Q9NPB3 220 aa14.44□□□□□ -0.1
PKP4-203ENST00000411900 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
PKP4-203ENST00000411900 ACEP12821 1306 aa14.43□□□□□ -0.1
PKP4-203ENST00000411900 BRWD3Q6RI45 1802 aa14.43□□□□□ -0.1
PKP4-203ENST00000411900 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
PKP4-203ENST00000411900 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
PKP4-203ENST00000411900 ROCK2O75116 1388 aaKnown RBP14.42□□□□□ -0.1
PKP4-203ENST00000411900 ATAD2Q6PL18 1390 aa14.42□□□□□ -0.1
PKP4-203ENST00000411900 PHRF1Q9P1Y6 1649 aaKnown RBP14.41□□□□□ -0.1
PKP4-203ENST00000411900 COL14A1Q05707 1796 aaKnown RBP14.41□□□□□ -0.1
PKP4-203ENST00000411900 PPIP5K1Q6PFW1 1433 aa14.41□□□□□ -0.1
PKP4-203ENST00000411900 POLR3AO14802 1390 aaPredicted RBP14.4□□□□□ -0.1
PKP4-203ENST00000411900 NBPF8Q3BBV2 869 aa14.4□□□□□ -0.1
PKP4-203ENST00000411900 BTG4Q9NY30 223 aa14.4□□□□□ -0.1
PKP4-203ENST00000411900 VPS72Q15906 364 aa14.39□□□□□ -0.11
PKP4-203ENST00000411900 EP400Q96L91 3159 aa14.38□□□□□ -0.11
PKP4-203ENST00000411900 PLEKHG3A1L390 1219 aa14.38□□□□□ -0.11
PKP4-203ENST00000411900 A0A0G2JS52 829 aa14.37□□□□□ -0.11
PKP4-203ENST00000411900 ZC3H6P61129 1189 aaKnown RBP14.37□□□□□ -0.11
PKP4-203ENST00000411900 MYT1Q01538 1121 aa14.37□□□□□ -0.11
PKP4-203ENST00000411900 CHRNA2Q15822 529 aa14.37□□□□□ -0.11
PKP4-203ENST00000411900 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
PKP4-203ENST00000411900 KIAA0232Q92628 1395 aa14.36□□□□□ -0.11
PKP4-203ENST00000411900 TONSLQ96HA7 1378 aa14.36□□□□□ -0.11
PKP4-203ENST00000411900 SEPT12Q8IYM1 358 aa14.36□□□□□ -0.11
PKP4-203ENST00000411900 ABTB2Q8N961 1025 aa14.36□□□□□ -0.11
PKP4-203ENST00000411900 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
PKP4-203ENST00000411900 CABP1Q9NZU7 370 aa14.36□□□□□ -0.11
PKP4-203ENST00000411900 EVC2Q86UK5 1308 aa14.35□□□□□ -0.11
PKP4-203ENST00000411900 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
PKP4-203ENST00000411900 FAM98CQ17RN3 349 aaKnown RBP14.34□□□□□ -0.11
PKP4-203ENST00000411900 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
PKP4-203ENST00000411900 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
PKP4-203ENST00000411900 AKAP12Q02952 1782 aa14.32□□□□□ -0.12
PKP4-203ENST00000411900 USP6P35125 1406 aa14.32□□□□□ -0.12
PKP4-203ENST00000411900 ZBTB7CA1YPR0 619 aa14.31□□□□□ -0.12
PKP4-203ENST00000411900 PIK3C2AO00443 1686 aa14.3□□□□□ -0.12
PKP4-203ENST00000411900 ONECUT3O60422 494 aaPredicted RBP14.3□□□□□ -0.12
PKP4-203ENST00000411900 KRT27Q7Z3Y8 459 aa14.3□□□□□ -0.12
PKP4-203ENST00000411900 NLRP13Q86W25 1043 aa14.3□□□□□ -0.12
PKP4-203ENST00000411900 SPATA31A5Q5VU36 1347 aa14.3□□□□□ -0.12
PKP4-203ENST00000411900 SPATA31A7Q8IWB4 1347 aa14.3□□□□□ -0.12
PKP4-203ENST00000411900 USP35Q9P2H5 1018 aa14.29□□□□□ -0.12
PKP4-203ENST00000411900 USP19O94966 1318 aa14.29□□□□□ -0.12
PKP4-203ENST00000411900 GCP02774 474 aa14.28□□□□□ -0.12
PKP4-203ENST00000411900 EVA1CP58658 441 aa14.28□□□□□ -0.12
PKP4-203ENST00000411900 NLRP6P59044 892 aa14.28□□□□□ -0.12
PKP4-203ENST00000411900 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
PKP4-203ENST00000411900 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
PKP4-203ENST00000411900 CAMTA1Q9Y6Y1 1673 aa14.28□□□□□ -0.12
PKP4-203ENST00000411900 THSD7AQ9UPZ6 1657 aa14.27□□□□□ -0.12
PKP4-203ENST00000411900 BLMP54132 1417 aaPredicted RBP14.26□□□□□ -0.13
PKP4-203ENST00000411900 SSH2Q76I76 1423 aa14.26□□□□□ -0.13
PKP4-203ENST00000411900 SPATA31A1Q5TZJ5 1347 aa14.26□□□□□ -0.13
PKP4-203ENST00000411900 SOX12O15370 315 aa14.26□□□□□ -0.13
PKP4-203ENST00000411900 DEFB132Q7Z7B7 95 aa14.26□□□□□ -0.13
PKP4-203ENST00000411900 CCDC125Q86Z20 511 aa14.26□□□□□ -0.13
PKP4-203ENST00000411900 BRD4O60885 1362 aaPredicted RBP14.25□□□□□ -0.13
PKP4-203ENST00000411900 CPDO75976 1380 aa14.25□□□□□ -0.13
PKP4-203ENST00000411900 TTC21BQ7Z4L5 1316 aa14.25□□□□□ -0.13
PKP4-203ENST00000411900 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
PKP4-203ENST00000411900 LARP1Q6PKG0 1096 aaKnown RBP14.25□□□□□ -0.13
PKP4-203ENST00000411900 SLIT3O75094 1523 aa14.25□□□□□ -0.13
PKP4-203ENST00000411900 KTN1Q86UP2 1357 aaKnown RBP14.24□□□□□ -0.13
PKP4-203ENST00000411900 SF3B2Q13435 895 aaKnown RBP14.24□□□□□ -0.13
PKP4-203ENST00000411900 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
PKP4-203ENST00000411900 RGPD5Q99666 1765 aa14.24□□□□□ -0.13
PKP4-203ENST00000411900 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
PKP4-203ENST00000411900 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
PKP4-203ENST00000411900 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
PKP4-203ENST00000411900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.22□□□□□ -0.138e-7■■■□□ 15.8
PKP4-203ENST00000411900 ZRANB1Q9UGI0 708 aa14.22□□□□□ -0.13
PKP4-203ENST00000411900 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
PKP4-203ENST00000411900 COL18A1P39060 1754 aa14.22□□□□□ -0.13
PKP4-203ENST00000411900 RGPD1P0DJD0 1748 aa14.21□□□□□ -0.13
PKP4-203ENST00000411900 SLC12A5Q9H2X9 1139 aa14.21□□□□□ -0.13
PKP4-203ENST00000411900 CD163L1Q9NR16 1453 aa14.2□□□□□ -0.14
PKP4-203ENST00000411900 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
PKP4-203ENST00000411900 TTC21AQ8NDW8 1320 aa14.19□□□□□ -0.14
PKP4-203ENST00000411900 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
PKP4-203ENST00000411900 AATKQ6ZMQ8 1374 aa14.19□□□□□ -0.14
PKP4-203ENST00000411900 TNS1Q9HBL0 1735 aaKnown RBP14.18□□□□□ -0.14
PKP4-203ENST00000411900 BARGINQ6ZT62 677 aa14.18□□□□□ -0.14
PKP4-203ENST00000411900 NME9Q86XW9 330 aa14.18□□□□□ -0.14
PKP4-203ENST00000411900 AXIN2Q9Y2T1 843 aa14.18□□□□□ -0.14
PKP4-203ENST00000411900 CRB1P82279 1406 aa14.17□□□□□ -0.14
PKP4-203ENST00000411900 NFAT5O94916 1531 aa14.17□□□□□ -0.14
PKP4-203ENST00000411900 BAG6P46379 1132 aa14.17□□□□□ -0.14
PKP4-203ENST00000411900 PDE3BQ13370 1112 aa14.17□□□□□ -0.14
PKP4-203ENST00000411900 HDGFL2Q7Z4V5 671 aaPredicted RBP14.17□□□□□ -0.14
PKP4-203ENST00000411900 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
PKP4-203ENST00000411900 TESK2Q96S53 571 aa14.17□□□□□ -0.14
PKP4-203ENST00000411900 WNK3Q9BYP7 1800 aa14.17□□□□□ -0.14
PKP4-203ENST00000411900 LTN1O94822 1766 aa14.17□□□□□ -0.14
PKP4-203ENST00000411900 PARP4Q9UKK3 1724 aaKnown RBP14.16□□□□□ -0.14
PKP4-203ENST00000411900 TRIM37O94972 964 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms