RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 YEATS2Q9ULM3 1422 aa12.53□□□□□ -0.4
CCDC196-203ENST00000411796 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.4
CCDC196-203ENST00000411796 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.4
CCDC196-203ENST00000411796 NPDC1Q9NQX5 325 aaPredicted RBP12.52□□□□□ -0.41
CCDC196-203ENST00000411796 MPHOSPH9Q99550 1183 aa12.51□□□□□ -0.41
CCDC196-203ENST00000411796 NUP155O75694 1391 aa12.51□□□□□ -0.41
CCDC196-203ENST00000411796 ARHGAP31Q2M1Z3 1444 aa12.51□□□□□ -0.41
CCDC196-203ENST00000411796 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
CCDC196-203ENST00000411796 LMTK2Q8IWU2 1503 aa12.51□□□□□ -0.41
CCDC196-203ENST00000411796 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
CCDC196-203ENST00000411796 MADDQ8WXG6 1647 aa12.51□□□□□ -0.41
CCDC196-203ENST00000411796 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
CCDC196-203ENST00000411796 PBX2P40425 430 aa12.5□□□□□ -0.41
CCDC196-203ENST00000411796 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
CCDC196-203ENST00000411796 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
CCDC196-203ENST00000411796 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
CCDC196-203ENST00000411796 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
CCDC196-203ENST00000411796 GPIHBP1Q8IV16 184 aa12.49□□□□□ -0.41
CCDC196-203ENST00000411796 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
CCDC196-203ENST00000411796 RPRD2Q5VT52 1461 aaKnown RBP12.48□□□□□ -0.41
CCDC196-203ENST00000411796 PTGDRQ13258 359 aa12.48□□□□□ -0.41
CCDC196-203ENST00000411796 TRIM52Q96A61 297 aa12.48□□□□□ -0.41
CCDC196-203ENST00000411796 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
CCDC196-203ENST00000411796 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
CCDC196-203ENST00000411796 PPP1R3GB7ZBB8 358 aa12.47□□□□□ -0.41
CCDC196-203ENST00000411796 GPR37O15354 613 aa12.47□□□□□ -0.41
CCDC196-203ENST00000411796 RIMS1Q86UR5 1692 aaKnown RBP12.47□□□□□ -0.41
CCDC196-203ENST00000411796 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
CCDC196-203ENST00000411796 ABCA6Q8N139 1617 aa12.47□□□□□ -0.41
CCDC196-203ENST00000411796 RNF17Q9BXT8 1623 aaKnown RBP12.47□□□□□ -0.41
CCDC196-203ENST00000411796 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
CCDC196-203ENST00000411796 TPRNQ4KMQ1 711 aa12.46□□□□□ -0.41
CCDC196-203ENST00000411796 GGT6Q6P531 493 aa12.46□□□□□ -0.41
CCDC196-203ENST00000411796 KRTAP3-3Q9BYR6 98 aa12.46□□□□□ -0.41
CCDC196-203ENST00000411796 KRTAP3-2Q9BYR7 98 aa12.46□□□□□ -0.41
CCDC196-203ENST00000411796 UNC13BO14795 1591 aa12.45□□□□□ -0.42
CCDC196-203ENST00000411796 FCHSD2O94868 740 aa12.45□□□□□ -0.42
CCDC196-203ENST00000411796 PRKCSHP14314 528 aaPredicted RBP12.45□□□□□ -0.42
CCDC196-203ENST00000411796 ZC3H15Q8WU90 426 aaKnown RBP12.45□□□□□ -0.42
CCDC196-203ENST00000411796 SLC52A1Q9NWF4 448 aa12.45□□□□□ -0.42
CCDC196-203ENST00000411796 PRDM15P57071 1507 aaPredicted RBP12.45□□□□□ -0.42
CCDC196-203ENST00000411796 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
CCDC196-203ENST00000411796 LSM11P83369 360 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCDC196-203ENST00000411796 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
CCDC196-203ENST00000411796 IQGAP3Q86VI3 1631 aa12.41□□□□□ -0.42
CCDC196-203ENST00000411796 PTPRTO14522 1441 aa12.41□□□□□ -0.42
CCDC196-203ENST00000411796 PRSS12P56730 875 aa12.41□□□□□ -0.42
CCDC196-203ENST00000411796 PROX2Q3B8N5 592 aa12.41□□□□□ -0.42
CCDC196-203ENST00000411796 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
CCDC196-203ENST00000411796 DHX57Q6P158 1386 aaKnown RBP12.41□□□□□ -0.42
CCDC196-203ENST00000411796 FECHP22830 423 aa12.4□□□□□ -0.42
CCDC196-203ENST00000411796 ZEB1P37275 1124 aaPredicted RBP12.4□□□□□ -0.42
CCDC196-203ENST00000411796 HIC1Q14526 733 aa12.4□□□□□ -0.42
CCDC196-203ENST00000411796 ANKRD13DQ6ZTN6 518 aa12.4□□□□□ -0.42
CCDC196-203ENST00000411796 ZC3H13Q5T200 1668 aaKnown RBP12.4□□□□□ -0.42
CCDC196-203ENST00000411796 ANKRD30BQ9BXX2 1392 aa12.4□□□□□ -0.42
CCDC196-203ENST00000411796 PZPP20742 1482 aa12.4□□□□□ -0.43
CCDC196-203ENST00000411796 GNPATO15228 680 aa12.39□□□□□ -0.43
CCDC196-203ENST00000411796 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
CCDC196-203ENST00000411796 STRCQ7RTU9 1775 aa12.38□□□□□ -0.43
CCDC196-203ENST00000411796 SLC4A5Q9BY07 1137 aa12.38□□□□□ -0.43
CCDC196-203ENST00000411796 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
CCDC196-203ENST00000411796 VPS9D1Q9Y2B5 631 aa12.38□□□□□ -0.43
CCDC196-203ENST00000411796 NPATQ14207 1427 aa12.37□□□□□ -0.43
CCDC196-203ENST00000411796 ZMYND10O75800 440 aa12.37□□□□□ -0.43
CCDC196-203ENST00000411796 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
CCDC196-203ENST00000411796 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
CCDC196-203ENST00000411796 MROH1Q8NDA8 1641 aa12.37□□□□□ -0.43
CCDC196-203ENST00000411796 ABCC3O15438 1527 aa12.37□□□□□ -0.43
CCDC196-203ENST00000411796 NOS1P29475 1434 aa12.37□□□□□ -0.43
CCDC196-203ENST00000411796 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
CCDC196-203ENST00000411796 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
CCDC196-203ENST00000411796 CCER1Q8TC90 406 aaPredicted RBP12.36□□□□□ -0.43
CCDC196-203ENST00000411796 RPGRIP1LQ68CZ1 1315 aa12.36□□□□□ -0.43
CCDC196-203ENST00000411796 TET3O43151 1660 aa12.35□□□□□ -0.43
CCDC196-203ENST00000411796 NEURL4Q96JN8 1562 aa12.35□□□□□ -0.43
CCDC196-203ENST00000411796 TK2O00142 265 aa12.35□□□□□ -0.43
CCDC196-203ENST00000411796 ADGRD1Q6QNK2 874 aa12.35□□□□□ -0.43
CCDC196-203ENST00000411796 BARGINQ6ZT62 677 aa12.34□□□□□ -0.43
CCDC196-203ENST00000411796 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
CCDC196-203ENST00000411796 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
CCDC196-203ENST00000411796 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
CCDC196-203ENST00000411796 MROH2AA6NES4 1674 aa12.34□□□□□ -0.43
CCDC196-203ENST00000411796 EFCAB6Q5THR3 1501 aa12.33□□□□□ -0.44
CCDC196-203ENST00000411796 ONECUT3O60422 494 aaPredicted RBP12.33□□□□□ -0.44
CCDC196-203ENST00000411796 C3orf80F5H4A9 247 aa12.32□□□□□ -0.44
CCDC196-203ENST00000411796 MLECQ14165 292 aa12.31□□□□□ -0.44
CCDC196-203ENST00000411796 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
CCDC196-203ENST00000411796 PACS2Q86VP3 889 aa12.31□□□□□ -0.44
CCDC196-203ENST00000411796 RABGEF1Q9UJ41 708 aa12.31□□□□□ -0.44
CCDC196-203ENST00000411796 SETD1BQ9UPS6 1966 aaKnown RBP12.3□□□□□ -0.44
CCDC196-203ENST00000411796 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
CCDC196-203ENST00000411796 BHMG1C9JSJ3 638 aaPredicted RBP12.3□□□□□ -0.44
CCDC196-203ENST00000411796 LTBP4Q8N2S1 1624 aa12.29□□□□□ -0.44
CCDC196-203ENST00000411796 PLA2R1Q13018 1463 aa12.29□□□□□ -0.44
CCDC196-203ENST00000411796 NLRP1Q9C000 1473 aa12.29□□□□□ -0.44
CCDC196-203ENST00000411796 HRO43593 1189 aa12.29□□□□□ -0.44
CCDC196-203ENST00000411796 IDI1Q13907 227 aa12.29□□□□□ -0.44
CCDC196-203ENST00000411796 THEMISQ8N1K5 641 aaPredicted RBP12.29□□□□□ -0.44
CCDC196-203ENST00000411796 KRI1Q8N9T8 703 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms