RNA–Protein interactions for RNA: ENST00000411769.1

CRKL-202, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

TSL 1 (best)

Gene CRKL, Length 2,037 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-202ENST00000411769 ADGRL3Q9HAR2 1447 aa25.59■■□□□ 1.69
CRKL-202ENST00000411769 TMEM94Q12767 1356 aa25.58■■□□□ 1.69
CRKL-202ENST00000411769 ACEP12821 1306 aa25.57■■□□□ 1.68
CRKL-202ENST00000411769 PLEKHG3A1L390 1219 aa25.56■■□□□ 1.68
CRKL-202ENST00000411769 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
CRKL-202ENST00000411769 NRKQ7Z2Y5 1582 aa25.55■■□□□ 1.68
CRKL-202ENST00000411769 C14orf37Q86TY3 774 aa25.55■■□□□ 1.68
CRKL-202ENST00000411769 ANKARQ7Z5J8 1434 aa25.55■■□□□ 1.68
CRKL-202ENST00000411769 PPP4R2Q9NY27 417 aa25.54■■□□□ 1.68
CRKL-202ENST00000411769 ZNF692Q9BU19 519 aaPredicted RBP25.53■■□□□ 1.68
CRKL-202ENST00000411769 SENP3-EIF4A1A0A087X0R7 540 aa25.52■■□□□ 1.68
CRKL-202ENST00000411769 NME9Q86XW9 330 aa25.51■■□□□ 1.67
CRKL-202ENST00000411769 USP6P35125 1406 aa25.5■■□□□ 1.67
CRKL-202ENST00000411769 ZRANB1Q9UGI0 708 aa25.49■■□□□ 1.67
CRKL-202ENST00000411769 SMG6Q86US8 1419 aaKnown RBP25.49■■□□□ 1.67
CRKL-202ENST00000411769 ANP32EQ9BTT0 268 aa25.49■■□□□ 1.67
CRKL-202ENST00000411769 MTHFSP49914 203 aa25.48■■□□□ 1.67
CRKL-202ENST00000411769 POLR3AO14802 1390 aaPredicted RBP25.48■■□□□ 1.67
CRKL-202ENST00000411769 NGDNQ8NEJ9 315 aaKnown RBP25.47■■□□□ 1.67
CRKL-202ENST00000411769 CERKQ8TCT0 537 aa25.46■■□□□ 1.67
CRKL-202ENST00000411769 TTC21BQ7Z4L5 1316 aa25.46■■□□□ 1.67
CRKL-202ENST00000411769 ADAMTS8Q9UP79 889 aa25.46■■□□□ 1.67
CRKL-202ENST00000411769 MAP2P11137 1827 aaKnown RBP25.46■■□□□ 1.67
CRKL-202ENST00000411769 SHPRHQ149N8 1683 aa25.45■■□□□ 1.67
CRKL-202ENST00000411769 WDR43Q15061 677 aaKnown RBP eCLIP25.45■■□□□ 1.66
CRKL-202ENST00000411769 NCOA3Q9Y6Q9 1424 aa25.45■■□□□ 1.66
CRKL-202ENST00000411769 FBLN1P23142 703 aa25.44■■□□□ 1.66
CRKL-202ENST00000411769 C19orf44Q9H6X5 657 aa25.44■■□□□ 1.66
CRKL-202ENST00000411769 SSH2Q76I76 1423 aa25.44■■□□□ 1.66
CRKL-202ENST00000411769 BLMP54132 1417 aaPredicted RBP25.42■■□□□ 1.66
CRKL-202ENST00000411769 PHF8Q9UPP1 1060 aa25.41■■□□□ 1.66
CRKL-202ENST00000411769 COG3Q96JB2 828 aa25.41■■□□□ 1.66
CRKL-202ENST00000411769 ESCO1Q5FWF5 840 aa25.4■■□□□ 1.66
CRKL-202ENST00000411769 NUDCQ9Y266 331 aa25.4■■□□□ 1.66
CRKL-202ENST00000411769 RNF123Q5XPI4 1314 aa25.39■■□□□ 1.66
CRKL-202ENST00000411769 MSH6P52701 1360 aa25.39■■□□□ 1.66
CRKL-202ENST00000411769 PIK3C2AO00443 1686 aa25.37■■□□□ 1.65
CRKL-202ENST00000411769 OVOS2A0A0J9YW53 1432 aa25.37■■□□□ 1.65
CRKL-202ENST00000411769 INSRP06213 1382 aa25.37■■□□□ 1.65
CRKL-202ENST00000411769 OVOS2Q6IE36 1432 aa25.37■■□□□ 1.65
CRKL-202ENST00000411769 CFAP53Q96M91 514 aa25.37■■□□□ 1.65
CRKL-202ENST00000411769 ORAI2Q96SN7 254 aa25.37■■□□□ 1.65
CRKL-202ENST00000411769 TTC21AQ8NDW8 1320 aa25.35■■□□□ 1.65
CRKL-202ENST00000411769 B4GALNT3Q6L9W6 998 aa25.35■■□□□ 1.65
CRKL-202ENST00000411769 SALL2Q9Y467 1007 aaPredicted RBP25.35■■□□□ 1.65
CRKL-202ENST00000411769 COL3A1P02461 1466 aaPredicted RBP25.35■■□□□ 1.65
CRKL-202ENST00000411769 POLKQ9UBT6 870 aa25.34■■□□□ 1.65
CRKL-202ENST00000411769 IQSEC2Q5JU85 1478 aa25.34■■□□□ 1.65
CRKL-202ENST00000411769 C1orf167Q5SNV9 1468 aa25.34■■□□□ 1.65
CRKL-202ENST00000411769 ATF3P18847 181 aa25.33■■□□□ 1.65
CRKL-202ENST00000411769 DCCP43146 1447 aa25.33■■□□□ 1.65
CRKL-202ENST00000411769 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
CRKL-202ENST00000411769 CCDC146Q8IYE0 955 aa25.32■■□□□ 1.64
CRKL-202ENST00000411769 CADPS2Q86UW7 1296 aa25.32■■□□□ 1.64
CRKL-202ENST00000411769 EMILIN1Q9Y6C2 1016 aa25.32■■□□□ 1.64
CRKL-202ENST00000411769 MST1RQ04912 1400 aa25.31■■□□□ 1.64
CRKL-202ENST00000411769 AATKQ6ZMQ8 1374 aa25.31■■□□□ 1.64
CRKL-202ENST00000411769 MARF1Q9Y4F3 1742 aaKnown RBP25.31■■□□□ 1.64
CRKL-202ENST00000411769 PAK3O75914 559 aaPredicted RBP25.3■■□□□ 1.64
CRKL-202ENST00000411769 RRS1Q15050 365 aaKnown RBP25.3■■□□□ 1.64
CRKL-202ENST00000411769 FANCIQ9NVI1 1328 aa25.3■■□□□ 1.64
CRKL-202ENST00000411769 PNPLA6Q8IY17 1366 aa25.29■■□□□ 1.64
CRKL-202ENST00000411769 KIF1AQ12756 1690 aa25.28■■□□□ 1.64
CRKL-202ENST00000411769 MSH5O43196 834 aa25.28■■□□□ 1.64
CRKL-202ENST00000411769 FOXO3O43524 673 aa25.28■■□□□ 1.64
CRKL-202ENST00000411769 NUTM2GQ5VZR2 741 aa25.28■■□□□ 1.64
CRKL-202ENST00000411769 SLAIN2Q9P270 581 aa25.28■■□□□ 1.64
CRKL-202ENST00000411769 SOX12O15370 315 aa25.27■■□□□ 1.64
CRKL-202ENST00000411769 PSME1Q06323 249 aa25.27■■□□□ 1.64
CRKL-202ENST00000411769 UBAP1LF5GYI3 381 aa25.27■■□□□ 1.64
CRKL-202ENST00000411769 USP31Q70CQ4 1352 aa25.26■■□□□ 1.63
CRKL-202ENST00000411769 XPCQ01831 940 aaPredicted RBP25.26■■□□□ 1.63
CRKL-202ENST00000411769 ABTB2Q8N961 1025 aa25.25■■□□□ 1.63
CRKL-202ENST00000411769 USP54Q70EL1 1684 aa25.25■■□□□ 1.63
CRKL-202ENST00000411769 NLRP6P59044 892 aa25.25■■□□□ 1.63
CRKL-202ENST00000411769 CDK12Q9NYV4 1490 aaPredicted RBP25.24■■□□□ 1.63
CRKL-202ENST00000411769 TOM1O60784 492 aa25.24■■□□□ 1.63
CRKL-202ENST00000411769 U2SURPO15042 1029 aaKnown RBP25.23■■□□□ 1.63
CRKL-202ENST00000411769 DIAPH1O60610 1272 aaKnown RBP25.23■■□□□ 1.63
CRKL-202ENST00000411769 U2AF1L5P0DN76 240 aaPredicted RBP25.23■■□□□ 1.63
CRKL-202ENST00000411769 U2AF1Q01081 240 aaKnown RBP eCLIP25.23■■□□□ 1.63
CRKL-202ENST00000411769 PEAK1Q9H792 1746 aa25.22■■□□□ 1.63
CRKL-202ENST00000411769 TRPM3Q9HCF6 1732 aaPredicted RBP25.22■■□□□ 1.63
CRKL-202ENST00000411769 PIP4K2BP78356 416 aa25.21■■□□□ 1.63
CRKL-202ENST00000411769 APAF1O14727 1248 aa25.2■■□□□ 1.63
CRKL-202ENST00000411769 BRINP3Q76B58 766 aa25.19■■□□□ 1.62
CRKL-202ENST00000411769 DDX17Q92841 729 aaKnown RBP25.19■■□□□ 1.62
CRKL-202ENST00000411769 KRT28Q7Z3Y7 464 aa25.17■■□□□ 1.62
CRKL-202ENST00000411769 ROBO1Q9Y6N7 1651 aa25.16■■□□□ 1.62
CRKL-202ENST00000411769 RUNDC1Q96C34 613 aa25.16■■□□□ 1.62
CRKL-202ENST00000411769 MAP3K19Q56UN5 1328 aa25.16■■□□□ 1.62
CRKL-202ENST00000411769 IL13P35225 146 aa25.14■■□□□ 1.62
CRKL-202ENST00000411769 CDCA7LQ96GN5 454 aa25.13■■□□□ 1.61
CRKL-202ENST00000411769 LTN1O94822 1766 aa25.13■■□□□ 1.61
CRKL-202ENST00000411769 LMOD2Q6P5Q4 547 aa25.12■■□□□ 1.61
CRKL-202ENST00000411769 ALS2Q96Q42 1657 aa25.12■■□□□ 1.61
CRKL-202ENST00000411769 HSP90AB2PQ58FF8 381 aa25.12■■□□□ 1.61
CRKL-202ENST00000411769 PLEKHG5O94827 1062 aa25.11■■□□□ 1.61
CRKL-202ENST00000411769 TCP11L2Q8N4U5 519 aa25.11■■□□□ 1.61
CRKL-202ENST00000411769 RRP7AQ9Y3A4 280 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms