RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 ERBB3P21860 1342 aa10.15□□□□□ -0.78
LINC00396-201ENST00000411690 SF3B2Q13435 895 aaKnown RBP10.15□□□□□ -0.78
LINC00396-201ENST00000411690 DEFB132Q7Z7B7 95 aa10.15□□□□□ -0.78
LINC00396-201ENST00000411690 ZNF710Q8N1W2 664 aa10.15□□□□□ -0.78
LINC00396-201ENST00000411690 ATRNO75882 1429 aa10.15□□□□□ -0.79
LINC00396-201ENST00000411690 NOS1P29475 1434 aa10.15□□□□□ -0.79
LINC00396-201ENST00000411690 DCCP43146 1447 aa10.15□□□□□ -0.79
LINC00396-201ENST00000411690 PIK3R4Q99570 1358 aa10.14□□□□□ -0.79
LINC00396-201ENST00000411690 G3V3G9 751 aa10.14□□□□□ -0.79
LINC00396-201ENST00000411690 YY1P25490 414 aa10.14□□□□□ -0.79
LINC00396-201ENST00000411690 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC00396-201ENST00000411690 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
LINC00396-201ENST00000411690 RRP7BPQ9NSQ0 103 aa10.14□□□□□ -0.79
LINC00396-201ENST00000411690 AMOTL2Q9Y2J4 779 aa10.14□□□□□ -0.79
LINC00396-201ENST00000411690 MST1RQ04912 1400 aa10.14□□□□□ -0.79
LINC00396-201ENST00000411690 ERBINQ96RT1 1412 aa10.14□□□□□ -0.79
LINC00396-201ENST00000411690 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
LINC00396-201ENST00000411690 PSDA5PKW4 1024 aaPredicted RBP10.12□□□□□ -0.79
LINC00396-201ENST00000411690 HRCP23327 699 aa10.12□□□□□ -0.79
LINC00396-201ENST00000411690 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
LINC00396-201ENST00000411690 GJD4Q96KN9 370 aaPredicted RBP10.12□□□□□ -0.79
LINC00396-201ENST00000411690 ADAMTS13Q76LX8 1427 aa10.12□□□□□ -0.79
LINC00396-201ENST00000411690 LMTK2Q8IWU2 1503 aa10.12□□□□□ -0.79
LINC00396-201ENST00000411690 PTCH1Q13635 1447 aa10.11□□□□□ -0.79
LINC00396-201ENST00000411690 DOK7Q18PE1 504 aa10.11□□□□□ -0.79
LINC00396-201ENST00000411690 CHGAP10645 457 aaKnown RBP10.1□□□□□ -0.79
LINC00396-201ENST00000411690 MYOM3Q5VTT5 1437 aa10.09□□□□□ -0.79
LINC00396-201ENST00000411690 PTPRUQ92729 1446 aa10.09□□□□□ -0.79
LINC00396-201ENST00000411690 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
LINC00396-201ENST00000411690 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
LINC00396-201ENST00000411690 TRPM2O94759 1503 aa10.08□□□□□ -0.8
LINC00396-201ENST00000411690 MYO5BQ9ULV0 1848 aa10.08□□□□□ -0.8
LINC00396-201ENST00000411690 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
LINC00396-201ENST00000411690 BCL9LQ86UU0 1499 aa10.08□□□□□ -0.8
LINC00396-201ENST00000411690 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
LINC00396-201ENST00000411690 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
LINC00396-201ENST00000411690 TMEM131LA2VDJ0 1609 aa10.07□□□□□ -0.8
LINC00396-201ENST00000411690 EFCAB3Q8N7B9 438 aa10.06□□□□□ -0.8
LINC00396-201ENST00000411690 EP400Q96L91 3159 aa10.06□□□□□ -0.8
LINC00396-201ENST00000411690 BAG6P46379 1132 aa10.05□□□□□ -0.8
LINC00396-201ENST00000411690 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
LINC00396-201ENST00000411690 UNC13BO14795 1591 aa10.05□□□□□ -0.8
LINC00396-201ENST00000411690 RPRD2Q5VT52 1461 aaKnown RBP10.04□□□□□ -0.8
LINC00396-201ENST00000411690 ORAI2Q96SN7 254 aa10.04□□□□□ -0.8
LINC00396-201ENST00000411690 ABCC5O15440 1437 aa10.04□□□□□ -0.8
LINC00396-201ENST00000411690 ADGRL3Q9HAR2 1447 aa10.04□□□□□ -0.8
LINC00396-201ENST00000411690 C1orf167Q5SNV9 1468 aa10.04□□□□□ -0.8
LINC00396-201ENST00000411690 R3HDM1Q15032 1099 aaKnown RBP10.03□□□□□ -0.8
LINC00396-201ENST00000411690 UNC5CLQ8IV45 518 aa10.03□□□□□ -0.8
LINC00396-201ENST00000411690 SEPT12Q8IYM1 358 aa10.03□□□□□ -0.8
LINC00396-201ENST00000411690 SPOCK2Q92563 424 aa10.03□□□□□ -0.8
LINC00396-201ENST00000411690 RALGAPBQ86X10 1494 aa10.03□□□□□ -0.8
LINC00396-201ENST00000411690 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
LINC00396-201ENST00000411690 MICALL2Q8IY33 904 aa10.02□□□□□ -0.81
LINC00396-201ENST00000411690 LAMC1P11047 1609 aa10.02□□□□□ -0.81
LINC00396-201ENST00000411690 COL22A1Q8NFW1 1626 aaPredicted RBP10.02□□□□□ -0.81
LINC00396-201ENST00000411690 SPHKAPQ2M3C7 1700 aa10.02□□□□□ -0.81
LINC00396-201ENST00000411690 XRN1Q8IZH2 1706 aaKnown RBP10.02□□□□□ -0.81
LINC00396-201ENST00000411690 GLI3P10071 1580 aa10.01□□□□□ -0.81
LINC00396-201ENST00000411690 GPR153Q6NV75 609 aa10.01□□□□□ -0.81
LINC00396-201ENST00000411690 KRT27Q7Z3Y8 459 aa10.01□□□□□ -0.81
LINC00396-201ENST00000411690 ZNF687Q8N1G0 1237 aa10.01□□□□□ -0.81
LINC00396-201ENST00000411690 CHIC2Q9UKJ5 165 aa10.01□□□□□ -0.81
LINC00396-201ENST00000411690 MYOM2P54296 1465 aa10.01□□□□□ -0.81
LINC00396-201ENST00000411690 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
LINC00396-201ENST00000411690 BRWD3Q6RI45 1802 aa10□□□□□ -0.81
LINC00396-201ENST00000411690 EN1Q05925 392 aaPredicted RBP10□□□□□ -0.81
LINC00396-201ENST00000411690 CROCC2H7BZ55 1655 aa9.99□□□□□ -0.81
LINC00396-201ENST00000411690 MARF1Q9Y4F3 1742 aaKnown RBP9.99□□□□□ -0.81
LINC00396-201ENST00000411690 SENP3-EIF4A1A0A087X0R7 540 aa9.99□□□□□ -0.81
LINC00396-201ENST00000411690 METP08581 1390 aa9.99□□□□□ -0.81
LINC00396-201ENST00000411690 NALCNQ8IZF0 1738 aa9.99□□□□□ -0.81
LINC00396-201ENST00000411690 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.99□□□□□ -0.81
LINC00396-201ENST00000411690 DAPK1P53355 1430 aa9.99□□□□□ -0.81
LINC00396-201ENST00000411690 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
LINC00396-201ENST00000411690 NPHP3Q7Z494 1330 aa9.98□□□□□ -0.81
LINC00396-201ENST00000411690 SLIT2O94813 1529 aa9.97□□□□□ -0.81
LINC00396-201ENST00000411690 ONECUT3O60422 494 aaPredicted RBP9.97□□□□□ -0.81
LINC00396-201ENST00000411690 KANK4Q5T7N3 995 aaPredicted RBP9.97□□□□□ -0.81
LINC00396-201ENST00000411690 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
LINC00396-201ENST00000411690 A0A0G2JS52 829 aa9.96□□□□□ -0.82
LINC00396-201ENST00000411690 MYT1Q01538 1121 aa9.96□□□□□ -0.82
LINC00396-201ENST00000411690 VPS72Q15906 364 aa9.96□□□□□ -0.82
LINC00396-201ENST00000411690 ESCO1Q5FWF5 840 aa9.96□□□□□ -0.82
LINC00396-201ENST00000411690 MS4A4AQ96JQ5 239 aa9.96□□□□□ -0.82
LINC00396-201ENST00000411690 FOXO3O43524 673 aa9.95□□□□□ -0.82
LINC00396-201ENST00000411690 XPCQ01831 940 aaPredicted RBP9.95□□□□□ -0.82
LINC00396-201ENST00000411690 NRXN3Q9Y4C0 1643 aa9.95□□□□□ -0.82
LINC00396-201ENST00000411690 EZH2Q15910 746 aaKnown RBP9.94□□□□□ -0.82
LINC00396-201ENST00000411690 PPP1R1BQ9UD71 204 aaPredicted RBP9.94□□□□□ -0.82
LINC00396-201ENST00000411690 PTPN23Q9H3S7 1636 aa9.93□□□□□ -0.82
LINC00396-201ENST00000411690 ZNF326Q5BKZ1 582 aaKnown RBP9.93□□□□□ -0.82
LINC00396-201ENST00000411690 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
LINC00396-201ENST00000411690 ZNF784Q8NCA9 323 aaPredicted RBP9.93□□□□□ -0.82
LINC00396-201ENST00000411690 KHSRPQ92945 711 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00396-201ENST00000411690 PXDNQ92626 1479 aa9.92□□□□□ -0.82
LINC00396-201ENST00000411690 LRPPRCP42704 1394 aaKnown RBP9.92□□□□□ -0.82
LINC00396-201ENST00000411690 HAP1P54257 671 aaPredicted RBP9.92□□□□□ -0.82
LINC00396-201ENST00000411690 ANKRD50Q9ULJ7 1429 aa9.91□□□□□ -0.82
LINC00396-201ENST00000411690 C1QTNF8P60827 252 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms