RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 LMOD2Q6P5Q4 547 aa14.05□□□□□ -0.16
TTC39A-207ENST00000411642 NINLQ9Y2I6 1382 aa14.05□□□□□ -0.16
TTC39A-207ENST00000411642 CPSF1Q10570 1443 aaKnown RBP14.05□□□□□ -0.16
TTC39A-207ENST00000411642 NUTM2BA6NNL0 878 aaPredicted RBP14.04□□□□□ -0.16
TTC39A-207ENST00000411642 NUTM2EB1AL46 878 aaPredicted RBP14.04□□□□□ -0.16
TTC39A-207ENST00000411642 NUTM2AQ8IVF1 878 aaPredicted RBP14.04□□□□□ -0.16
TTC39A-207ENST00000411642 SLC12A5Q9H2X9 1139 aa14.04□□□□□ -0.16
TTC39A-207ENST00000411642 PHRF1Q9P1Y6 1649 aaKnown RBP14.04□□□□□ -0.16
TTC39A-207ENST00000411642 PIK3C2AO00443 1686 aa14.04□□□□□ -0.16
TTC39A-207ENST00000411642 BRD4O60885 1362 aaPredicted RBP14.03□□□□□ -0.16
TTC39A-207ENST00000411642 KTN1Q86UP2 1357 aaKnown RBP14.03□□□□□ -0.16
TTC39A-207ENST00000411642 A0A1W2PP64 1363 aa14.02□□□□□ -0.17
TTC39A-207ENST00000411642 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
TTC39A-207ENST00000411642 SSH2Q76I76 1423 aa14.01□□□□□ -0.17
TTC39A-207ENST00000411642 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
TTC39A-207ENST00000411642 ZEB1P37275 1124 aaPredicted RBP14.01□□□□□ -0.17
TTC39A-207ENST00000411642 HDGFL2Q7Z4V5 671 aaPredicted RBP14.01□□□□□ -0.17
TTC39A-207ENST00000411642 POLR3GLQ9BT43 218 aa14.01□□□□□ -0.17
TTC39A-207ENST00000411642 TERF2IPQ9NYB0 399 aa14.01□□□□□ -0.17
TTC39A-207ENST00000411642 KIF20BQ96Q89 1820 aa14□□□□□ -0.17
TTC39A-207ENST00000411642 ANKRD36BQ8N2N9 1353 aa13.99□□□□□ -0.17
TTC39A-207ENST00000411642 USP54Q70EL1 1684 aa13.99□□□□□ -0.17
TTC39A-207ENST00000411642 MEX3CQ5U5Q3 659 aaKnown RBP13.99□□□□□ -0.17
TTC39A-207ENST00000411642 NUTM2GQ5VZR2 741 aa13.99□□□□□ -0.17
TTC39A-207ENST00000411642 ABTB2Q8N961 1025 aa13.99□□□□□ -0.17
TTC39A-207ENST00000411642 CABLES1Q8TDN4 633 aa13.99□□□□□ -0.17
TTC39A-207ENST00000411642 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
TTC39A-207ENST00000411642 TTC21BQ7Z4L5 1316 aa13.98□□□□□ -0.17
TTC39A-207ENST00000411642 C11orf95C9JLR9 678 aaPredicted RBP13.98□□□□□ -0.17
TTC39A-207ENST00000411642 ADAMTS2O95450 1211 aa13.98□□□□□ -0.17
TTC39A-207ENST00000411642 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
TTC39A-207ENST00000411642 TTC21AQ8NDW8 1320 aa13.97□□□□□ -0.17
TTC39A-207ENST00000411642 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
TTC39A-207ENST00000411642 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
TTC39A-207ENST00000411642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.96□□□□□ -0.17
TTC39A-207ENST00000411642 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
TTC39A-207ENST00000411642 NLRP13Q86W25 1043 aa13.95□□□□□ -0.18
TTC39A-207ENST00000411642 C8orf37Q96NL8 207 aa13.95□□□□□ -0.18
TTC39A-207ENST00000411642 SLIT3O75094 1523 aa13.95□□□□□ -0.18
TTC39A-207ENST00000411642 USP19O94966 1318 aa13.94□□□□□ -0.18
TTC39A-207ENST00000411642 NLRP6P59044 892 aa13.94□□□□□ -0.18
TTC39A-207ENST00000411642 NWD2Q9ULI1 1742 aa13.94□□□□□ -0.18
TTC39A-207ENST00000411642 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
TTC39A-207ENST00000411642 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.93□□□□□ -0.18
TTC39A-207ENST00000411642 NME9Q86XW9 330 aa13.93□□□□□ -0.18
TTC39A-207ENST00000411642 LTN1O94822 1766 aa13.93□□□□□ -0.18
TTC39A-207ENST00000411642 CCDC7Q96M83 1385 aa13.93□□□□□ -0.18
TTC39A-207ENST00000411642 NSD3Q9BZ95 1437 aa13.92□□□□□ -0.18
TTC39A-207ENST00000411642 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
TTC39A-207ENST00000411642 ANKRD26Q9UPS8 1709 aa13.92□□□□□ -0.18
TTC39A-207ENST00000411642 AFF2P51816 1311 aa13.91□□□□□ -0.18
TTC39A-207ENST00000411642 WASHC2AQ641Q2 1341 aa13.91□□□□□ -0.18
TTC39A-207ENST00000411642 OVOS2A0A0J9YW53 1432 aa13.91□□□□□ -0.18
TTC39A-207ENST00000411642 OVOS2Q6IE36 1432 aa13.91□□□□□ -0.18
TTC39A-207ENST00000411642 NRAPQ86VF7 1730 aa13.91□□□□□ -0.18
TTC39A-207ENST00000411642 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
TTC39A-207ENST00000411642 USP31Q70CQ4 1352 aa13.91□□□□□ -0.18
TTC39A-207ENST00000411642 CARD14Q9BXL6 1004 aa13.9□□□□□ -0.18
TTC39A-207ENST00000411642 RGPD5Q99666 1765 aa13.9□□□□□ -0.18
TTC39A-207ENST00000411642 NFAT5O94916 1531 aa13.9□□□□□ -0.19
TTC39A-207ENST00000411642 KIAA0232Q92628 1395 aa13.89□□□□□ -0.19
TTC39A-207ENST00000411642 GCP02774 474 aa13.89□□□□□ -0.19
TTC39A-207ENST00000411642 ZC3H6P61129 1189 aaKnown RBP13.89□□□□□ -0.19
TTC39A-207ENST00000411642 PANK3Q9H999 370 aa13.89□□□□□ -0.19
TTC39A-207ENST00000411642 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
TTC39A-207ENST00000411642 SLIT2O94813 1529 aa13.89□□□□□ -0.19
TTC39A-207ENST00000411642 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
TTC39A-207ENST00000411642 SOX12O15370 315 aa13.88□□□□□ -0.19
TTC39A-207ENST00000411642 ZNF772Q68DY9 489 aaPredicted RBP13.88□□□□□ -0.19
TTC39A-207ENST00000411642 PRDM11Q9NQV5 511 aa13.88□□□□□ -0.19
TTC39A-207ENST00000411642 COL18A1P39060 1754 aa13.88□□□□□ -0.19
TTC39A-207ENST00000411642 CPDO75976 1380 aa13.87□□□□□ -0.19
TTC39A-207ENST00000411642 FAM83GA6ND36 823 aa13.87□□□□□ -0.19
TTC39A-207ENST00000411642 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-207ENST00000411642 KCNH5Q8NCM2 988 aa13.87□□□□□ -0.19
TTC39A-207ENST00000411642 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
TTC39A-207ENST00000411642 MAP2P11137 1827 aaKnown RBP13.86□□□□□ -0.19
TTC39A-207ENST00000411642 FYB1O15117 783 aa13.86□□□□□ -0.19
TTC39A-207ENST00000411642 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
TTC39A-207ENST00000411642 COG3Q96JB2 828 aa13.86□□□□□ -0.19
TTC39A-207ENST00000411642 GGNBP2Q9H3C7 697 aa13.86□□□□□ -0.19
TTC39A-207ENST00000411642 USP21Q9UK80 565 aa13.86□□□□□ -0.19
TTC39A-207ENST00000411642 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
TTC39A-207ENST00000411642 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
TTC39A-207ENST00000411642 POTEAQ6S8J7 498 aa13.84□□□□□ -0.19
TTC39A-207ENST00000411642 BTG4Q9NY30 223 aa13.84□□□□□ -0.19
TTC39A-207ENST00000411642 ATRNO75882 1429 aa13.83□□□□□ -0.2
TTC39A-207ENST00000411642 CAMTA1Q9Y6Y1 1673 aa13.83□□□□□ -0.2
TTC39A-207ENST00000411642 UNC5CLQ8IV45 518 aa13.83□□□□□ -0.2
TTC39A-207ENST00000411642 ABCC6O95255 1503 aa13.83□□□□□ -0.2
TTC39A-207ENST00000411642 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-207ENST00000411642 KNSTRNQ9Y448 316 aa13.82□□□□□ -0.2
TTC39A-207ENST00000411642 AATKQ6ZMQ8 1374 aa13.82□□□□□ -0.2
TTC39A-207ENST00000411642 GLI3P10071 1580 aa13.81□□□□□ -0.2
TTC39A-207ENST00000411642 ARHGEF25Q86VW2 580 aa13.81□□□□□ -0.2
TTC39A-207ENST00000411642 QTRT2Q9H974 415 aaKnown RBP13.81□□□□□ -0.2
TTC39A-207ENST00000411642 NSD2O96028 1365 aa13.81□□□□□ -0.2
TTC39A-207ENST00000411642 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
TTC39A-207ENST00000411642 PEAK1Q9H792 1746 aa13.79□□□□□ -0.2
TTC39A-207ENST00000411642 STRN4Q9NRL3 753 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms