RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 CCDC158Q5M9N0 1113 aa22■■□□□ 1.11
HCG11-201ENST00000411553 TTC39AQ5SRH9 613 aa22■■□□□ 1.11
HCG11-201ENST00000411553 TWISTNBQ3B726 338 aaPredicted RBP22■■□□□ 1.11
HCG11-201ENST00000411553 AFAP1Q8N556 730 aa22■■□□□ 1.11
HCG11-201ENST00000411553 CDK5RAP3Q96JB5 506 aa21.99■■□□□ 1.11
HCG11-201ENST00000411553 FANCIQ9NVI1 1328 aa21.99■■□□□ 1.11
HCG11-201ENST00000411553 TMEM132AQ24JP5 1023 aa21.99■■□□□ 1.11
HCG11-201ENST00000411553 PRAM1Q96QH2 718 aa21.99■■□□□ 1.11
HCG11-201ENST00000411553 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
HCG11-201ENST00000411553 RRP12Q5JTH9 1297 aaKnown RBP21.98■■□□□ 1.11
HCG11-201ENST00000411553 CCAR1Q8IX12 1150 aaKnown RBP21.98■■□□□ 1.11
HCG11-201ENST00000411553 ATP2B1P20020 1258 aa21.98■■□□□ 1.11
HCG11-201ENST00000411553 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.98■■□□□ 1.11
HCG11-201ENST00000411553 GNAI2P04899 355 aa21.98■■□□□ 1.11
HCG11-201ENST00000411553 EXOSC9Q06265 439 aaKnown RBP21.97■■□□□ 1.11
HCG11-201ENST00000411553 TXLNAP40222 546 aa21.97■■□□□ 1.11
HCG11-201ENST00000411553 PPP2R1AP30153 589 aa21.96■■□□□ 1.11
HCG11-201ENST00000411553 WWC2Q6AWC2 1192 aa21.96■■□□□ 1.11
HCG11-201ENST00000411553 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.96■■□□□ 1.11
HCG11-201ENST00000411553 PDCP20941 246 aa21.96■■□□□ 1.11
HCG11-201ENST00000411553 CABP4P57796 275 aa21.96■■□□□ 1.11
HCG11-201ENST00000411553 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.11
HCG11-201ENST00000411553 KINO60870 393 aaKnown RBP21.95■■□□□ 1.1
HCG11-201ENST00000411553 LETM1O95202 739 aaPredicted RBP21.95■■□□□ 1.1
HCG11-201ENST00000411553 RDXP35241 583 aaKnown RBP21.95■■□□□ 1.1
HCG11-201ENST00000411553 THEMISQ8N1K5 641 aaPredicted RBP21.95■■□□□ 1.1
HCG11-201ENST00000411553 HDGFL1Q5TGJ6 251 aa21.94■■□□□ 1.1
HCG11-201ENST00000411553 CAGE1Q8TC20 777 aa21.94■■□□□ 1.1
HCG11-201ENST00000411553 MCM2P49736 904 aa21.94■■□□□ 1.1
HCG11-201ENST00000411553 NEK4P51957 841 aa21.94■■□□□ 1.1
HCG11-201ENST00000411553 PNISRQ8TF01 805 aaKnown RBP21.94■■□□□ 1.1
HCG11-201ENST00000411553 GCC1Q96CN9 775 aa21.93■■□□□ 1.1
HCG11-201ENST00000411553 NCOA2Q15596 1464 aa21.93■■□□□ 1.1
HCG11-201ENST00000411553 SF3B2Q13435 895 aaKnown RBP21.93■■□□□ 1.1
HCG11-201ENST00000411553 HSP90B2PQ58FF3 399 aa21.93■■□□□ 1.1
HCG11-201ENST00000411553 ZNF396Q96N95 335 aaPredicted RBP21.93■■□□□ 1.1
HCG11-201ENST00000411553 FAM13BQ9NYF5 915 aa21.93■■□□□ 1.1
HCG11-201ENST00000411553 TOM1L2Q6ZVM7 507 aa21.93■■□□□ 1.1
HCG11-201ENST00000411553 SCAPERQ9BY12 1400 aa21.93■■□□□ 1.1
HCG11-201ENST00000411553 SLC4A2P04920 1241 aa21.93■■□□□ 1.1
HCG11-201ENST00000411553 KRT18P05783 430 aaKnown RBP21.93■■□□□ 1.1
HCG11-201ENST00000411553 ZNF692Q9BU19 519 aaPredicted RBP21.93■■□□□ 1.1
HCG11-201ENST00000411553 MAGEC2Q9UBF1 373 aaPredicted RBP21.93■■□□□ 1.1
HCG11-201ENST00000411553 FILIP1LQ4L180 1135 aa21.92■■□□□ 1.1
HCG11-201ENST00000411553 FAM43AQ8N2R8 423 aa21.92■■□□□ 1.1
HCG11-201ENST00000411553 LRRC9Q6ZRR7 1453 aa21.92■■□□□ 1.1
HCG11-201ENST00000411553 CCDC39Q9UFE4 941 aa21.92■■□□□ 1.1
HCG11-201ENST00000411553 SPG7Q9UQ90 795 aa21.91■■□□□ 1.1
HCG11-201ENST00000411553 PPP1R1BQ9UD71 204 aaPredicted RBP21.91■■□□□ 1.1
HCG11-201ENST00000411553 SULT6B1Q6IMI4 303 aa21.91■■□□□ 1.1
HCG11-201ENST00000411553 C1orf115Q9H7X2 142 aa21.91■■□□□ 1.1
HCG11-201ENST00000411553 NACAP1Q9BZK3 213 aa21.91■■□□□ 1.1
HCG11-201ENST00000411553 DDX54Q8TDD1 881 aaKnown RBP21.9■■□□□ 1.1
HCG11-201ENST00000411553 CDK19Q9BWU1 502 aa21.9■■□□□ 1.1
HCG11-201ENST00000411553 CCT4P50991 539 aaKnown RBP21.9■■□□□ 1.1
HCG11-201ENST00000411553 ATP2B2Q01814 1243 aa21.9■■□□□ 1.1
HCG11-201ENST00000411553 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
HCG11-201ENST00000411553 STK38Q15208 465 aa21.9■■□□□ 1.1
HCG11-201ENST00000411553 ZNF530Q6P9A1 599 aaPredicted RBP21.9■■□□□ 1.1
HCG11-201ENST00000411553 SMARCE1Q969G3 411 aa21.9■■□□□ 1.1
HCG11-201ENST00000411553 TRIM5Q9C035 493 aa21.9■■□□□ 1.1
HCG11-201ENST00000411553 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
HCG11-201ENST00000411553 RABEP1Q15276 862 aa21.89■■□□□ 1.1
HCG11-201ENST00000411553 MYO6Q9UM54 1294 aa21.89■■□□□ 1.1
HCG11-201ENST00000411553 SMC2O95347 1197 aa21.89■■□□□ 1.09
HCG11-201ENST00000411553 MBD3O95983 291 aa21.89■■□□□ 1.09
HCG11-201ENST00000411553 TTLL5Q6EMB2 1281 aa21.89■■□□□ 1.09
HCG11-201ENST00000411553 PDZRN3Q9UPQ7 1066 aa21.89■■□□□ 1.09
HCG11-201ENST00000411553 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
HCG11-201ENST00000411553 NASPP49321 788 aaPredicted RBP21.89■■□□□ 1.09
HCG11-201ENST00000411553 RNF214Q8ND24 703 aa21.89■■□□□ 1.09
HCG11-201ENST00000411553 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.09
HCG11-201ENST00000411553 NUTM2BA6NNL0 878 aaPredicted RBP21.88■■□□□ 1.09
HCG11-201ENST00000411553 NUTM2EB1AL46 878 aaPredicted RBP21.88■■□□□ 1.09
HCG11-201ENST00000411553 SYCP1Q15431 976 aa21.88■■□□□ 1.09
HCG11-201ENST00000411553 NUTM2AQ8IVF1 878 aaPredicted RBP21.88■■□□□ 1.09
HCG11-201ENST00000411553 CDCA7LQ96GN5 454 aa21.87■■□□□ 1.09
HCG11-201ENST00000411553 SRCIN1Q9C0H9 1055 aa21.87■■□□□ 1.09
HCG11-201ENST00000411553 CABP1Q9NZU7 370 aa21.87■■□□□ 1.09
HCG11-201ENST00000411553 JMYQ8N9B5 988 aa21.86■■□□□ 1.09
HCG11-201ENST00000411553 MRE11P49959 708 aa21.86■■□□□ 1.09
HCG11-201ENST00000411553 SIL1Q9H173 461 aa21.86■■□□□ 1.09
HCG11-201ENST00000411553 TRIM22Q8IYM9 498 aa21.86■■□□□ 1.09
HCG11-201ENST00000411553 FMNL2Q96PY5 1086 aa21.86■■□□□ 1.09
HCG11-201ENST00000411553 HFM1A2PYH4 1435 aa21.86■■□□□ 1.09
HCG11-201ENST00000411553 MPHOSPH8Q99549 860 aa21.86■■□□□ 1.09
HCG11-201ENST00000411553 LRRCC1Q9C099 1032 aa21.86■■□□□ 1.09
HCG11-201ENST00000411553 PAF1Q8N7H5 531 aa21.85■■□□□ 1.09
HCG11-201ENST00000411553 TSR2Q969E8 191 aaKnown RBP21.85■■□□□ 1.09
HCG11-201ENST00000411553 CYP46A1Q9Y6A2 500 aa21.85■■□□□ 1.09
HCG11-201ENST00000411553 ERCC4Q92889 916 aaPredicted RBP21.85■■□□□ 1.09
HCG11-201ENST00000411553 PDE3AQ14432 1141 aa21.85■■□□□ 1.09
HCG11-201ENST00000411553 NFKBIBQ15653 356 aa21.85■■□□□ 1.09
HCG11-201ENST00000411553 CCDC57Q2TAC2 916 aa21.84■■□□□ 1.09
HCG11-201ENST00000411553 ZSCAN25Q6NSZ9 544 aa21.84■■□□□ 1.09
HCG11-201ENST00000411553 CAVIN1Q6NZI2 390 aaKnown RBP21.84■■□□□ 1.09
HCG11-201ENST00000411553 SLC12A5Q9H2X9 1139 aa21.84■■□□□ 1.09
HCG11-201ENST00000411553 BRPF1P55201 1214 aaPredicted RBP21.84■■□□□ 1.09
HCG11-201ENST00000411553 ANKRD1Q15327 319 aa21.84■■□□□ 1.09
HCG11-201ENST00000411553 CEBPZQ03701 1054 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms