RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 LYPD4Q6UWN0 246 aa7.44□□□□□ -1.22
RNU4-61P-201ENST00000411243 SOS2Q07890 1332 aaPredicted RBP7.44□□□□□ -1.22
RNU4-61P-201ENST00000411243 MLLT3P42568 568 aaPredicted RBP7.43□□□□□ -1.22
RNU4-61P-201ENST00000411243 PTCRAQ6ISU1 281 aaPredicted RBP7.43□□□□□ -1.22
RNU4-61P-201ENST00000411243 FURINP09958 794 aa7.42□□□□□ -1.22
RNU4-61P-201ENST00000411243 SULF1Q8IWU6 871 aa7.42□□□□□ -1.22
RNU4-61P-201ENST00000411243 FCHSD2O94868 740 aa7.41□□□□□ -1.22
RNU4-61P-201ENST00000411243 ADAMTS2O95450 1211 aa7.41□□□□□ -1.22
RNU4-61P-201ENST00000411243 BMP2P12643 396 aa7.41□□□□□ -1.22
RNU4-61P-201ENST00000411243 JUNDP17535 347 aa7.41□□□□□ -1.22
RNU4-61P-201ENST00000411243 PTSQ03393 145 aa7.41□□□□□ -1.22
RNU4-61P-201ENST00000411243 CNTNAP5Q8WYK1 1306 aa7.41□□□□□ -1.22
RNU4-61P-201ENST00000411243 NUTM2FA1L443 756 aa7.4□□□□□ -1.22
RNU4-61P-201ENST00000411243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.4□□□□□ -1.22
RNU4-61P-201ENST00000411243 LINC00528Q8N1L1 170 aa7.4□□□□□ -1.22
RNU4-61P-201ENST00000411243 ZFAND3Q9H8U3 227 aa7.4□□□□□ -1.22
RNU4-61P-201ENST00000411243 ZIC2O95409 532 aaPredicted RBP7.39□□□□□ -1.23
RNU4-61P-201ENST00000411243 CELA2BP08218 269 aaPredicted RBP7.39□□□□□ -1.23
RNU4-61P-201ENST00000411243 MEIOBQ8N635 442 aa7.38□□□□□ -1.23
RNU4-61P-201ENST00000411243 NUDT12Q9BQG2 462 aa7.38□□□□□ -1.23
RNU4-61P-201ENST00000411243 ENAMQ9NRM1 1142 aa7.38□□□□□ -1.23
RNU4-61P-201ENST00000411243 UPP2O95045 317 aa7.37□□□□□ -1.23
RNU4-61P-201ENST00000411243 VARSP26640 1264 aaKnown RBP7.37□□□□□ -1.23
RNU4-61P-201ENST00000411243 CCDC155Q8N6L0 562 aa7.37□□□□□ -1.23
RNU4-61P-201ENST00000411243 BEND7Q8N7W2 519 aaPredicted RBP7.37□□□□□ -1.23
RNU4-61P-201ENST00000411243 ITPKCQ96DU7 683 aa7.37□□□□□ -1.23
RNU4-61P-201ENST00000411243 SRSF11Q05519 484 aaKnown RBP7.36□□□□□ -1.23
RNU4-61P-201ENST00000411243 PODNQ7Z5L7 613 aa7.36□□□□□ -1.23
RNU4-61P-201ENST00000411243 VWA5B2Q8N398 1253 aa7.35□□□□□ -1.23
RNU4-61P-201ENST00000411243 SV2AQ7L0J3 742 aa7.34□□□□□ -1.23
RNU4-61P-201ENST00000411243 GOLGA2P5Q9HBQ8 144 aa7.34□□□□□ -1.23
RNU4-61P-201ENST00000411243 WDR70Q9NW82 654 aa7.34□□□□□ -1.23
RNU4-61P-201ENST00000411243 ITGA6P23229 1130 aa7.33□□□□□ -1.24
RNU4-61P-201ENST00000411243 ITGB7P26010 798 aa7.33□□□□□ -1.24
RNU4-61P-201ENST00000411243 LCE1DQ5T752 114 aa7.33□□□□□ -1.24
RNU4-61P-201ENST00000411243 NLRP7Q8WX94 980 aa7.33□□□□□ -1.24
RNU4-61P-201ENST00000411243 LINC01559Q495D7 138 aa7.32□□□□□ -1.24
RNU4-61P-201ENST00000411243 CDC14CA4D256 554 aa7.31□□□□□ -1.24
RNU4-61P-201ENST00000411243 SLC35F4A4IF30 521 aa7.31□□□□□ -1.24
RNU4-61P-201ENST00000411243 KRBA1A5PL33 1030 aa7.31□□□□□ -1.24
RNU4-61P-201ENST00000411243 TTLL8A6PVC2 850 aa7.31□□□□□ -1.24
RNU4-61P-201ENST00000411243 NR3C2P08235 984 aa7.3□□□□□ -1.24
RNU4-61P-201ENST00000411243 ZNF511Q8NB15 262 aa7.3□□□□□ -1.24
RNU4-61P-201ENST00000411243 UNC93B1Q9H1C4 597 aa7.3□□□□□ -1.24
RNU4-61P-201ENST00000411243 CCNYL3P0C7X3 344 aa7.29□□□□□ -1.24
RNU4-61P-201ENST00000411243 HIC1Q14526 733 aa7.29□□□□□ -1.24
RNU4-61P-201ENST00000411243 SH3RF1Q7Z6J0 888 aa7.29□□□□□ -1.24
RNU4-61P-201ENST00000411243 BAP1Q92560 729 aa7.29□□□□□ -1.24
RNU4-61P-201ENST00000411243 HLA-CQ95604 372 aa7.29□□□□□ -1.24
RNU4-61P-201ENST00000411243 CDK15Q96Q40 435 aa7.29□□□□□ -1.24
RNU4-61P-201ENST00000411243 ZMYM1Q5SVZ6 1142 aa7.28□□□□□ -1.24
RNU4-61P-201ENST00000411243 KDM4AO75164 1064 aa7.27□□□□□ -1.25
RNU4-61P-201ENST00000411243 NR5A1Q13285 461 aa7.27□□□□□ -1.25
RNU4-61P-201ENST00000411243 GAS6Q14393 721 aa7.27□□□□□ -1.25
RNU4-61P-201ENST00000411243 TSEN34Q9BSV6 310 aaKnown RBP7.27□□□□□ -1.25
RNU4-61P-201ENST00000411243 FAM174AQ8TBP5 190 aa7.26□□□□□ -1.25
RNU4-61P-201ENST00000411243 SPTLC1O15269 473 aa7.25□□□□□ -1.25
RNU4-61P-201ENST00000411243 USP46P62068 366 aa7.25□□□□□ -1.25
RNU4-61P-201ENST00000411243 ALYREFQ86V81 257 aaKnown RBP7.25□□□□□ -1.25
RNU4-61P-201ENST00000411243 CD46P15529 392 aa7.24□□□□□ -1.25
RNU4-61P-201ENST00000411243 RETREG3Q86VR2 466 aa7.24□□□□□ -1.25
RNU4-61P-201ENST00000411243 NEDD1Q8NHV4 660 aa7.24□□□□□ -1.25
RNU4-61P-201ENST00000411243 FIGNL2A6NMB9 653 aa7.23□□□□□ -1.25
RNU4-61P-201ENST00000411243 PHOX2BQ99453 314 aa7.23□□□□□ -1.25
RNU4-61P-201ENST00000411243 HOXA2O43364 376 aa7.22□□□□□ -1.25
RNU4-61P-201ENST00000411243 BCRP11274 1271 aa7.22□□□□□ -1.25
RNU4-61P-201ENST00000411243 MS4A1P11836 297 aa7.22□□□□□ -1.25
RNU4-61P-201ENST00000411243 SYMPKQ92797 1274 aaKnown RBP7.22□□□□□ -1.25
RNU4-61P-201ENST00000411243 PTPRNQ16849 979 aa7.21□□□□□ -1.26
RNU4-61P-201ENST00000411243 EVA1BQ9NVM1 165 aa7.21□□□□□ -1.26
RNU4-61P-201ENST00000411243 GRM5P41594 1212 aa7.2□□□□□ -1.26
RNU4-61P-201ENST00000411243 ARID5BQ14865 1188 aa7.2□□□□□ -1.26
RNU4-61P-201ENST00000411243 KCNH2Q12809 1159 aa7.19□□□□□ -1.26
RNU4-61P-201ENST00000411243 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
RNU4-61P-201ENST00000411243 GUCA2AQ02747 115 aa7.18□□□□□ -1.26
RNU4-61P-201ENST00000411243 ARHGEF1Q92888 912 aaKnown RBP7.18□□□□□ -1.26
RNU4-61P-201ENST00000411243 MBIPQ9NS73 344 aa7.18□□□□□ -1.26
RNU4-61P-201ENST00000411243 LRRC4BQ9NT99 713 aa7.18□□□□□ -1.26
RNU4-61P-201ENST00000411243 SCO2A0A1W2PP80 73 aa7.17□□□□□ -1.26
RNU4-61P-201ENST00000411243 GNPATO15228 680 aa7.17□□□□□ -1.26
RNU4-61P-201ENST00000411243 SPINT1O43278 529 aa7.17□□□□□ -1.26
RNU4-61P-201ENST00000411243 DCAF8L2P0C7V8 631 aa7.17□□□□□ -1.26
RNU4-61P-201ENST00000411243 COL8A1P27658 744 aa7.17□□□□□ -1.26
RNU4-61P-201ENST00000411243 SEMA6BQ9H3T3 888 aa7.17□□□□□ -1.26
RNU4-61P-201ENST00000411243 SENP3-EIF4A1A0A087X0R7 540 aa7.16□□□□□ -1.26
RNU4-61P-201ENST00000411243 FOXD4L6Q3SYB3 417 aaPredicted RBP7.16□□□□□ -1.26
RNU4-61P-201ENST00000411243 FOXD4L3Q6VB84 417 aaPredicted RBP7.16□□□□□ -1.26
RNU4-61P-201ENST00000411243 IGF1RP08069 1367 aa7.16□□□□□ -1.26
RNU4-61P-201ENST00000411243 ACDQ96AP0 544 aa7.15□□□□□ -1.26
RNU4-61P-201ENST00000411243 SNRPNP63162 240 aaKnown RBP7.14□□□□□ -1.27
RNU4-61P-201ENST00000411243 KRTAP4-2Q9BYR5 136 aa7.14□□□□□ -1.27
RNU4-61P-201ENST00000411243 ARTNQ5T4W7 220 aa7.13□□□□□ -1.27
RNU4-61P-201ENST00000411243 ZFP64Q9NPA5 681 aa7.13□□□□□ -1.27
RNU4-61P-201ENST00000411243 FOXJ1Q92949 421 aa7.12□□□□□ -1.27
RNU4-61P-201ENST00000411243 CUEDC1Q9NWM3 386 aaPredicted RBP7.12□□□□□ -1.27
RNU4-61P-201ENST00000411243 EMILIN1Q9Y6C2 1016 aa7.12□□□□□ -1.27
RNU4-61P-201ENST00000411243 C1QTNF9BB2RNN3 333 aa7.11□□□□□ -1.27
RNU4-61P-201ENST00000411243 FSHRP23945 695 aa7.11□□□□□ -1.27
RNU4-61P-201ENST00000411243 MKL2Q9ULH7 1088 aa7.11□□□□□ -1.27
RNU4-61P-201ENST00000411243 GPR37O15354 613 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms