RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 PAK3O75914 559 aaPredicted RBP25.33■■□□□ 1.65
LSM5-204ENST00000409909 UNC5CLQ8IV45 518 aa25.3■■□□□ 1.64
LSM5-204ENST00000409909 FAM83GA6ND36 823 aa25.29■■□□□ 1.64
LSM5-204ENST00000409909 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
LSM5-204ENST00000409909 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.28■■□□□ 1.64
LSM5-204ENST00000409909 GJD4Q96KN9 370 aaPredicted RBP25.27■■□□□ 1.64
LSM5-204ENST00000409909 UPF1Q92900 1129 aaKnown RBP eCLIP25.26■■□□□ 1.63
LSM5-204ENST00000409909 CRYBG1Q9Y4K1 1723 aa25.26■■□□□ 1.63
LSM5-204ENST00000409909 CARD11Q9BXL7 1154 aa25.25■■□□□ 1.63
LSM5-204ENST00000409909 EVC2Q86UK5 1308 aa25.25■■□□□ 1.63
LSM5-204ENST00000409909 PLCH1Q4KWH8 1693 aa25.24■■□□□ 1.63
LSM5-204ENST00000409909 RALGAPBQ86X10 1494 aa25.24■■□□□ 1.63
LSM5-204ENST00000409909 CABP1Q9NZU7 370 aa25.24■■□□□ 1.63
LSM5-204ENST00000409909 NUTM2GQ5VZR2 741 aa25.23■■□□□ 1.63
LSM5-204ENST00000409909 NWD2Q9ULI1 1742 aa25.22■■□□□ 1.63
LSM5-204ENST00000409909 GLI3P10071 1580 aa25.2■■□□□ 1.62
LSM5-204ENST00000409909 EP400Q96L91 3159 aa25.19■■□□□ 1.62
LSM5-204ENST00000409909 VPS72Q15906 364 aa25.19■■□□□ 1.62
LSM5-204ENST00000409909 ABTB2Q8N961 1025 aa25.18■■□□□ 1.62
LSM5-204ENST00000409909 BTG4Q9NY30 223 aa25.18■■□□□ 1.62
LSM5-204ENST00000409909 COL14A1Q05707 1796 aaKnown RBP25.17■■□□□ 1.62
LSM5-204ENST00000409909 PCGF6Q9BYE7 350 aa25.16■■□□□ 1.62
LSM5-204ENST00000409909 SBNO2Q9Y2G9 1366 aa25.16■■□□□ 1.62
LSM5-204ENST00000409909 PHRF1Q9P1Y6 1649 aaKnown RBP25.15■■□□□ 1.62
LSM5-204ENST00000409909 KIAA0232Q92628 1395 aa25.15■■□□□ 1.62
LSM5-204ENST00000409909 NRAPQ86VF7 1730 aa25.15■■□□□ 1.62
LSM5-204ENST00000409909 USP6P35125 1406 aa25.14■■□□□ 1.62
LSM5-204ENST00000409909 PRDM11Q9NQV5 511 aa25.14■■□□□ 1.62
LSM5-204ENST00000409909 ZC3H6P61129 1189 aaKnown RBP25.13■■□□□ 1.61
LSM5-204ENST00000409909 CCDC9Q9Y3X0 531 aaKnown RBP25.13■■□□□ 1.61
LSM5-204ENST00000409909 BRD4O60885 1362 aaPredicted RBP25.13■■□□□ 1.61
LSM5-204ENST00000409909 USP19O94966 1318 aa25.12■■□□□ 1.61
LSM5-204ENST00000409909 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
LSM5-204ENST00000409909 ATAD2Q6PL18 1390 aa25.11■■□□□ 1.61
LSM5-204ENST00000409909 CHRNA2Q15822 529 aa25.11■■□□□ 1.61
LSM5-204ENST00000409909 ONECUT3O60422 494 aaPredicted RBP25.1■■□□□ 1.61
LSM5-204ENST00000409909 NLRP13Q86W25 1043 aa25.1■■□□□ 1.61
LSM5-204ENST00000409909 NRKQ7Z2Y5 1582 aa25.09■■□□□ 1.61
LSM5-204ENST00000409909 SEPT12Q8IYM1 358 aa25.08■■□□□ 1.61
LSM5-204ENST00000409909 ZNF692Q9BU19 519 aaPredicted RBP25.08■■□□□ 1.61
LSM5-204ENST00000409909 CPSF1Q10570 1443 aaKnown RBP25.07■■□□□ 1.6
LSM5-204ENST00000409909 GCP02774 474 aa25.07■■□□□ 1.6
LSM5-204ENST00000409909 AKAP12Q02952 1782 aa25.07■■□□□ 1.6
LSM5-204ENST00000409909 BRWD3Q6RI45 1802 aa25.07■■□□□ 1.6
LSM5-204ENST00000409909 NLRP6P59044 892 aa25.06■■□□□ 1.6
LSM5-204ENST00000409909 ST20-MTHFSA0A0A6YYL1 179 aa25.05■■□□□ 1.6
LSM5-204ENST00000409909 TESK2Q96S53 571 aa25.05■■□□□ 1.6
LSM5-204ENST00000409909 SPATA31A5Q5VU36 1347 aa25.05■■□□□ 1.6
LSM5-204ENST00000409909 TTC21BQ7Z4L5 1316 aa25.05■■□□□ 1.6
LSM5-204ENST00000409909 SPATA31A7Q8IWB4 1347 aa25.05■■□□□ 1.6
LSM5-204ENST00000409909 CPDO75976 1380 aa25.05■■□□□ 1.6
LSM5-204ENST00000409909 PIK3C2AO00443 1686 aa25.04■■□□□ 1.6
LSM5-204ENST00000409909 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
LSM5-204ENST00000409909 FAM98CQ17RN3 349 aaKnown RBP25.03■■□□□ 1.6
LSM5-204ENST00000409909 KTN1Q86UP2 1357 aaKnown RBP25.02■■□□□ 1.6
LSM5-204ENST00000409909 STRN4Q9NRL3 753 aa25.01■■□□□ 1.59
LSM5-204ENST00000409909 TIMELESSQ9UNS1 1208 aa25.01■■□□□ 1.59
LSM5-204ENST00000409909 CD163L1Q9NR16 1453 aa25.01■■□□□ 1.59
LSM5-204ENST00000409909 CAMTA1Q9Y6Y1 1673 aa25.01■■□□□ 1.59
LSM5-204ENST00000409909 SLC12A5Q9H2X9 1139 aa25■■□□□ 1.59
LSM5-204ENST00000409909 SLIT3O75094 1523 aa25■■□□□ 1.59
LSM5-204ENST00000409909 TMC1Q8TDI8 760 aa24.99■■□□□ 1.59
LSM5-204ENST00000409909 LMO7Q8WWI1 1683 aa24.99■■□□□ 1.59
LSM5-204ENST00000409909 PUS7Q96PZ0 661 aaKnown RBP24.99■■□□□ 1.59
LSM5-204ENST00000409909 SPATA31A1Q5TZJ5 1347 aa24.98■■□□□ 1.59
LSM5-204ENST00000409909 TTC21AQ8NDW8 1320 aa24.98■■□□□ 1.59
LSM5-204ENST00000409909 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
LSM5-204ENST00000409909 KRT27Q7Z3Y8 459 aa24.97■■□□□ 1.59
LSM5-204ENST00000409909 A0A0G2JS52 829 aa24.96■■□□□ 1.59
LSM5-204ENST00000409909 EVA1CP58658 441 aa24.96■■□□□ 1.59
LSM5-204ENST00000409909 MYT1Q01538 1121 aa24.96■■□□□ 1.59
LSM5-204ENST00000409909 USP47Q96K76 1375 aa24.95■■□□□ 1.59
LSM5-204ENST00000409909 LARP1Q6PKG0 1096 aaKnown RBP24.95■■□□□ 1.58
LSM5-204ENST00000409909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.94■■□□□ 1.58
LSM5-204ENST00000409909 ZRANB1Q9UGI0 708 aa24.94■■□□□ 1.58
LSM5-204ENST00000409909 ZBTB7CA1YPR0 619 aa24.93■■□□□ 1.58
LSM5-204ENST00000409909 CCDC125Q86Z20 511 aa24.93■■□□□ 1.58
LSM5-204ENST00000409909 THSD7AQ9UPZ6 1657 aa24.93■■□□□ 1.58
LSM5-204ENST00000409909 AATKQ6ZMQ8 1374 aa24.93■■□□□ 1.58
LSM5-204ENST00000409909 HDGFL2Q7Z4V5 671 aaPredicted RBP24.92■■□□□ 1.58
LSM5-204ENST00000409909 USP35Q9P2H5 1018 aa24.92■■□□□ 1.58
LSM5-204ENST00000409909 SLC24A1O60721 1099 aa24.91■■□□□ 1.58
LSM5-204ENST00000409909 CCER1Q8TC90 406 aaPredicted RBP24.91■■□□□ 1.58
LSM5-204ENST00000409909 A0A1W2PP64 1363 aa24.91■■□□□ 1.58
LSM5-204ENST00000409909 COL18A1P39060 1754 aa24.9■■□□□ 1.58
LSM5-204ENST00000409909 COL5A2P05997 1499 aaPredicted RBP24.9■■□□□ 1.58
LSM5-204ENST00000409909 SOX12O15370 315 aa24.9■■□□□ 1.58
LSM5-204ENST00000409909 ARHGEF25Q86VW2 580 aa24.9■■□□□ 1.58
LSM5-204ENST00000409909 NME9Q86XW9 330 aa24.9■■□□□ 1.58
LSM5-204ENST00000409909 TERF2IPQ9NYB0 399 aa24.9■■□□□ 1.58
LSM5-204ENST00000409909 KCNH5Q8NCM2 988 aa24.89■■□□□ 1.58
LSM5-204ENST00000409909 AXIN2Q9Y2T1 843 aa24.89■■□□□ 1.58
LSM5-204ENST00000409909 USP31Q70CQ4 1352 aa24.89■■□□□ 1.57
LSM5-204ENST00000409909 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
LSM5-204ENST00000409909 FAM182BQ5T319 152 aa24.88■■□□□ 1.57
LSM5-204ENST00000409909 EDC4Q6P2E9 1401 aaKnown RBP24.87■■□□□ 1.57
LSM5-204ENST00000409909 NFAT5O94916 1531 aa24.87■■□□□ 1.57
LSM5-204ENST00000409909 BARGINQ6ZT62 677 aa24.87■■□□□ 1.57
LSM5-204ENST00000409909 TMF1P82094 1093 aa24.86■■□□□ 1.57
LSM5-204ENST00000409909 TCP11L2Q8N4U5 519 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms