RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TRIM67Q6ZTA4 783 aa9.04□□□□□ -0.96
PMS1-203ENST00000409593 ZNF511Q8NB15 262 aa9.04□□□□□ -0.96
PMS1-203ENST00000409593 GDF9O60383 454 aa9.03□□□□□ -0.96
PMS1-203ENST00000409593 ARMC2Q8NEN0 867 aa9.03□□□□□ -0.96
PMS1-203ENST00000409593 PKD2L1Q9P0L9 805 aa9.03□□□□□ -0.96
PMS1-203ENST00000409593 WNT7AO00755 349 aa9.02□□□□□ -0.97
PMS1-203ENST00000409593 RC3H1Q5TC82 1133 aaKnown RBP9.02□□□□□ -0.97
PMS1-203ENST00000409593 NBPF14Q5TI25 921 aa9.02□□□□□ -0.97
PMS1-203ENST00000409593 EHBP1Q8NDI1 1231 aa9.02□□□□□ -0.97
PMS1-203ENST00000409593 EPS8L1Q8TE68 723 aa9.02□□□□□ -0.97
PMS1-203ENST00000409593 AGERQ15109 404 aa9.01□□□□□ -0.97
PMS1-203ENST00000409593 MRGPRX2Q96LB1 330 aa9.01□□□□□ -0.97
PMS1-203ENST00000409593 PRR20EP86478 221 aa9□□□□□ -0.97
PMS1-203ENST00000409593 PRR20CP86479 221 aa9□□□□□ -0.97
PMS1-203ENST00000409593 PRR20DP86480 221 aa9□□□□□ -0.97
PMS1-203ENST00000409593 PRR20BP86481 221 aa9□□□□□ -0.97
PMS1-203ENST00000409593 PRR20AP86496 221 aa9□□□□□ -0.97
PMS1-203ENST00000409593 BANK1Q8NDB2 785 aa9□□□□□ -0.97
PMS1-203ENST00000409593 CYP4X1Q8N118 509 aa9□□□□□ -0.97
PMS1-203ENST00000409593 FKBPLQ9UIM3 349 aa9□□□□□ -0.97
PMS1-203ENST00000409593 LAPTM4AQ15012 233 aa8.99□□□□□ -0.97
PMS1-203ENST00000409593 FOXJ1Q92949 421 aa8.99□□□□□ -0.97
PMS1-203ENST00000409593 SNRKQ9NRH2 765 aa8.99□□□□□ -0.97
PMS1-203ENST00000409593 NRG2O14511 850 aaPredicted RBP8.98□□□□□ -0.97
PMS1-203ENST00000409593 PNMA1Q8ND90 353 aa8.98□□□□□ -0.97
PMS1-203ENST00000409593 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
PMS1-203ENST00000409593 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
PMS1-203ENST00000409593 TRIM34Q9BYJ4 488 aa8.97□□□□□ -0.97
PMS1-203ENST00000409593 MAGEB6P1A0A0J9YX57 407 aa8.97□□□□□ -0.97
PMS1-203ENST00000409593 BPHLQ86WA6 291 aaPredicted RBP8.97□□□□□ -0.97
PMS1-203ENST00000409593 GPKOWQ92917 476 aaPredicted RBP eCLIP8.97□□□□□ -0.97
PMS1-203ENST00000409593 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
PMS1-203ENST00000409593 FAM187AA6NFU0 413 aa8.96□□□□□ -0.98
PMS1-203ENST00000409593 GJD4Q96KN9 370 aaPredicted RBP8.96□□□□□ -0.98
PMS1-203ENST00000409593 APBB1O00213 710 aa8.95□□□□□ -0.98
PMS1-203ENST00000409593 TLL2Q9Y6L7 1015 aa8.95□□□□□ -0.98
PMS1-203ENST00000409593 ZC3H4Q9UPT8 1303 aaKnown RBP8.95□□□□□ -0.98
PMS1-203ENST00000409593 VARSP26640 1264 aaKnown RBP8.94□□□□□ -0.98
PMS1-203ENST00000409593 SNIP1Q8TAD8 396 aaKnown RBP8.94□□□□□ -0.98
PMS1-203ENST00000409593 TOR4AQ9NXH8 423 aa8.94□□□□□ -0.98
PMS1-203ENST00000409593 ALDH1A1P00352 501 aa8.94□□□□□ -0.98
PMS1-203ENST00000409593 PKDCCQ504Y2 493 aa8.94□□□□□ -0.98
PMS1-203ENST00000409593 C4orf48Q5BLP8 95 aa8.94□□□□□ -0.98
PMS1-203ENST00000409593 SH3BP5LQ7L8J4 393 aa8.94□□□□□ -0.98
PMS1-203ENST00000409593 FAM174AQ8TBP5 190 aa8.94□□□□□ -0.98
PMS1-203ENST00000409593 LCE2BO14633 110 aa8.93□□□□□ -0.98
PMS1-203ENST00000409593 PDXDC2PQ6P474 469 aa8.93□□□□□ -0.98
PMS1-203ENST00000409593 ARHGAP9Q9BRR9 750 aa8.93□□□□□ -0.98
PMS1-203ENST00000409593 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
PMS1-203ENST00000409593 SH3RF1Q7Z6J0 888 aa8.92□□□□□ -0.98
PMS1-203ENST00000409593 SOCS7O14512 581 aa8.91□□□□□ -0.98
PMS1-203ENST00000409593 SIAH2O43255 324 aa8.91□□□□□ -0.98
PMS1-203ENST00000409593 PTK2Q05397 1052 aa8.91□□□□□ -0.98
PMS1-203ENST00000409593 MCM6Q14566 821 aa8.91□□□□□ -0.98
PMS1-203ENST00000409593 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
PMS1-203ENST00000409593 J3QL48 77 aa8.91□□□□□ -0.98
PMS1-203ENST00000409593 ZBTB33Q86T24 672 aa8.91□□□□□ -0.98
PMS1-203ENST00000409593 WASF2Q9Y6W5 498 aa8.9□□□□□ -0.98
PMS1-203ENST00000409593 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
PMS1-203ENST00000409593 PRM3Q9NNZ6 103 aa8.89□□□□□ -0.99
PMS1-203ENST00000409593 TBC1D2BQ9UPU7 963 aa8.89□□□□□ -0.99
PMS1-203ENST00000409593 SMPD1P17405 629 aa8.88□□□□□ -0.99
PMS1-203ENST00000409593 ERFEQ4G0M1 354 aa8.88□□□□□ -0.99
PMS1-203ENST00000409593 GPSM3Q9Y4H4 160 aa8.88□□□□□ -0.99
PMS1-203ENST00000409593 DGAT1O75907 488 aa8.88□□□□□ -0.99
PMS1-203ENST00000409593 ADAM32Q8TC27 787 aa8.88□□□□□ -0.99
PMS1-203ENST00000409593 SLC10A4Q96EP9 437 aa8.88□□□□□ -0.99
PMS1-203ENST00000409593 C1QTNF2Q9BXJ5 285 aa8.88□□□□□ -0.99
PMS1-203ENST00000409593 OCSTAMPQ9BR26 566 aa8.87□□□□□ -0.99
PMS1-203ENST00000409593 ZBBXA8MT70 800 aa8.86□□□□□ -0.99
PMS1-203ENST00000409593 GPR37L1O60883 481 aa8.85□□□□□ -0.99
PMS1-203ENST00000409593 FBXO45P0C2W1 286 aa8.85□□□□□ -0.99
PMS1-203ENST00000409593 ABL2P42684 1182 aa8.85□□□□□ -0.99
PMS1-203ENST00000409593 FLIIQ13045 1269 aa8.85□□□□□ -0.99
PMS1-203ENST00000409593 VASH1Q7L8A9 365 aaPredicted RBP8.85□□□□□ -0.99
PMS1-203ENST00000409593 GDPD2Q9HCC8 539 aa8.85□□□□□ -0.99
PMS1-203ENST00000409593 ADH1CP00326 375 aa8.85□□□□□ -0.99
PMS1-203ENST00000409593 FSHRP23945 695 aa8.85□□□□□ -0.99
PMS1-203ENST00000409593 TRMT44Q8IYL2 757 aaKnown RBP8.85□□□□□ -0.99
PMS1-203ENST00000409593 HPS1Q92902 700 aa8.85□□□□□ -0.99
PMS1-203ENST00000409593 NNTQ13423 1086 aa8.84□□□□□ -0.99
PMS1-203ENST00000409593 MPNDQ8N594 471 aa8.84□□□□□ -0.99
PMS1-203ENST00000409593 CDK15Q96Q40 435 aa8.84□□□□□ -0.99
PMS1-203ENST00000409593 UBTFP17480 764 aaKnown RBP8.83□□□□□ -1
PMS1-203ENST00000409593 DZIP3Q86Y13 1208 aaKnown RBP8.83□□□□□ -1
PMS1-203ENST00000409593 MYT1Q01538 1121 aa8.82□□□□□ -1
PMS1-203ENST00000409593 NR1H3Q13133 447 aa8.82□□□□□ -1
PMS1-203ENST00000409593 MAP4K5Q9Y4K4 846 aa8.82□□□□□ -1
PMS1-203ENST00000409593 PCDHB9Q9Y5E1 797 aa8.82□□□□□ -1
PMS1-203ENST00000409593 ST8SIA5O15466 376 aa8.81□□□□□ -1
PMS1-203ENST00000409593 COG6Q9Y2V7 657 aa8.81□□□□□ -1
PMS1-203ENST00000409593 RAD21O60216 631 aa8.81□□□□□ -1
PMS1-203ENST00000409593 AVPP01185 164 aa8.81□□□□□ -1
PMS1-203ENST00000409593 CDV3Q9UKY7 258 aaKnown RBP8.81□□□□□ -1
PMS1-203ENST00000409593 AXIN1O15169 862 aa8.8□□□□□ -1
PMS1-203ENST00000409593 GRM5P41594 1212 aa8.8□□□□□ -1
PMS1-203ENST00000409593 NR5A1Q13285 461 aa8.8□□□□□ -1
PMS1-203ENST00000409593 NBPF20Q3BBV1 942 aa8.8□□□□□ -1
PMS1-203ENST00000409593 POM121Q96HA1 1249 aa8.8□□□□□ -1
PMS1-203ENST00000409593 ZNF330Q9Y3S2 320 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms