RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 BAG6P46379 1132 aa18.68■□□□□ 0.58
CHRNA1-205ENST00000409542 EN1Q05925 392 aaPredicted RBP18.68■□□□□ 0.58
CHRNA1-205ENST00000409542 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
CHRNA1-205ENST00000409542 COL14A1Q05707 1796 aaKnown RBP18.66■□□□□ 0.58
CHRNA1-205ENST00000409542 SPATA31A5Q5VU36 1347 aa18.66■□□□□ 0.58
CHRNA1-205ENST00000409542 SPATA31A7Q8IWB4 1347 aa18.66■□□□□ 0.58
CHRNA1-205ENST00000409542 CRYBG1Q9Y4K1 1723 aa18.65■□□□□ 0.58
CHRNA1-205ENST00000409542 GPRASP1Q5JY77 1395 aa18.64■□□□□ 0.57
CHRNA1-205ENST00000409542 WASLO00401 505 aaPredicted RBP18.63■□□□□ 0.57
CHRNA1-205ENST00000409542 KDM2AQ9Y2K7 1162 aa18.63■□□□□ 0.57
CHRNA1-205ENST00000409542 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
CHRNA1-205ENST00000409542 TULP4Q9NRJ4 1543 aa18.62■□□□□ 0.57
CHRNA1-205ENST00000409542 RGPD1P0DJD0 1748 aa18.61■□□□□ 0.57
CHRNA1-205ENST00000409542 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
CHRNA1-205ENST00000409542 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
CHRNA1-205ENST00000409542 EZH2Q15910 746 aaKnown RBP18.6■□□□□ 0.57
CHRNA1-205ENST00000409542 NGDNQ8NEJ9 315 aaKnown RBP18.6■□□□□ 0.57
CHRNA1-205ENST00000409542 TNS1Q9HBL0 1735 aaKnown RBP18.6■□□□□ 0.57
CHRNA1-205ENST00000409542 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
CHRNA1-205ENST00000409542 PRDM11Q9NQV5 511 aa18.58■□□□□ 0.57
CHRNA1-205ENST00000409542 SPATA31A1Q5TZJ5 1347 aa18.58■□□□□ 0.57
CHRNA1-205ENST00000409542 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.56
CHRNA1-205ENST00000409542 KIAA0232Q92628 1395 aa18.57■□□□□ 0.56
CHRNA1-205ENST00000409542 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
CHRNA1-205ENST00000409542 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
CHRNA1-205ENST00000409542 TRIM37O94972 964 aa18.57■□□□□ 0.56
CHRNA1-205ENST00000409542 NUTM2GQ5VZR2 741 aa18.57■□□□□ 0.56
CHRNA1-205ENST00000409542 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
CHRNA1-205ENST00000409542 CAMKK2Q96RR4 588 aa18.56■□□□□ 0.56
CHRNA1-205ENST00000409542 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
CHRNA1-205ENST00000409542 NUDT16Q96DE0 195 aaKnown RBP18.55■□□□□ 0.56
CHRNA1-205ENST00000409542 STRN4Q9NRL3 753 aa18.55■□□□□ 0.56
CHRNA1-205ENST00000409542 ATP7BP35670 1465 aa18.55■□□□□ 0.56
CHRNA1-205ENST00000409542 PHRF1Q9P1Y6 1649 aaKnown RBP18.54■□□□□ 0.56
CHRNA1-205ENST00000409542 USP35Q9P2H5 1018 aa18.52■□□□□ 0.56
CHRNA1-205ENST00000409542 ARHGEF28Q8N1W1 1705 aaKnown RBP18.52■□□□□ 0.56
CHRNA1-205ENST00000409542 APBA3O96018 575 aa18.51■□□□□ 0.55
CHRNA1-205ENST00000409542 FAM196AQ6ZSG2 479 aa18.51■□□□□ 0.55
CHRNA1-205ENST00000409542 CDK19Q9BWU1 502 aa18.51■□□□□ 0.55
CHRNA1-205ENST00000409542 ACEP12821 1306 aa18.49■□□□□ 0.55
CHRNA1-205ENST00000409542 ITSN1Q15811 1721 aa18.49■□□□□ 0.55
CHRNA1-205ENST00000409542 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
CHRNA1-205ENST00000409542 LARP1Q6PKG0 1096 aaKnown RBP18.48■□□□□ 0.55
CHRNA1-205ENST00000409542 CAMTA1Q9Y6Y1 1673 aa18.48■□□□□ 0.55
CHRNA1-205ENST00000409542 SSH2Q76I76 1423 aa18.47■□□□□ 0.55
CHRNA1-205ENST00000409542 POLR3AO14802 1390 aaPredicted RBP18.47■□□□□ 0.55
CHRNA1-205ENST00000409542 EVA1CP58658 441 aa18.46■□□□□ 0.55
CHRNA1-205ENST00000409542 BARGINQ6ZT62 677 aa18.46■□□□□ 0.55
CHRNA1-205ENST00000409542 TOPAZ1Q8N9V7 1692 aa18.46■□□□□ 0.55
CHRNA1-205ENST00000409542 RREB1Q92766 1687 aa18.46■□□□□ 0.55
CHRNA1-205ENST00000409542 NRKQ7Z2Y5 1582 aa18.45■□□□□ 0.54
CHRNA1-205ENST00000409542 NUP188Q5SRE5 1749 aa18.44■□□□□ 0.54
CHRNA1-205ENST00000409542 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
CHRNA1-205ENST00000409542 PDE3BQ13370 1112 aa18.44■□□□□ 0.54
CHRNA1-205ENST00000409542 ABTB2Q8N961 1025 aa18.44■□□□□ 0.54
CHRNA1-205ENST00000409542 STAC3Q96MF2 364 aa18.44■□□□□ 0.54
CHRNA1-205ENST00000409542 CCDC61Q9Y6R9 512 aa18.44■□□□□ 0.54
CHRNA1-205ENST00000409542 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
CHRNA1-205ENST00000409542 TCP11L2Q8N4U5 519 aa18.43■□□□□ 0.54
CHRNA1-205ENST00000409542 USP19O94966 1318 aa18.42■□□□□ 0.54
CHRNA1-205ENST00000409542 NBPF1Q3BBV0 1214 aa18.41■□□□□ 0.54
CHRNA1-205ENST00000409542 PARD3Q8TEW0 1356 aa18.41■□□□□ 0.54
CHRNA1-205ENST00000409542 CPDO75976 1380 aa18.4■□□□□ 0.54
CHRNA1-205ENST00000409542 GCP02774 474 aa18.39■□□□□ 0.53
CHRNA1-205ENST00000409542 NBPF14Q5TI25 921 aa18.37■□□□□ 0.53
CHRNA1-205ENST00000409542 COL5A2P05997 1499 aaPredicted RBP18.37■□□□□ 0.53
CHRNA1-205ENST00000409542 PARP4Q9UKK3 1724 aaKnown RBP18.36■□□□□ 0.53
CHRNA1-205ENST00000409542 CABP2Q9NPB3 220 aa18.36■□□□□ 0.53
CHRNA1-205ENST00000409542 THRAP3Q9Y2W1 955 aaKnown RBP18.36■□□□□ 0.53
CHRNA1-205ENST00000409542 PPIP5K1Q6PFW1 1433 aa18.35■□□□□ 0.53
CHRNA1-205ENST00000409542 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
CHRNA1-205ENST00000409542 PTF1AQ7RTS3 328 aa18.35■□□□□ 0.53
CHRNA1-205ENST00000409542 NLRP13Q86W25 1043 aa18.35■□□□□ 0.53
CHRNA1-205ENST00000409542 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
CHRNA1-205ENST00000409542 KIAA1210Q9ULL0 1709 aa18.34■□□□□ 0.53
CHRNA1-205ENST00000409542 YY1P25490 414 aa18.33■□□□□ 0.53
CHRNA1-205ENST00000409542 SRPK2P78362 688 aaKnown RBP18.33■□□□□ 0.53
CHRNA1-205ENST00000409542 KCNQ2O43526 872 aa18.33■□□□□ 0.52
CHRNA1-205ENST00000409542 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.52
CHRNA1-205ENST00000409542 CRB1P82279 1406 aa18.32■□□□□ 0.52
CHRNA1-205ENST00000409542 SPON1Q9HCB6 807 aa18.32■□□□□ 0.52
CHRNA1-205ENST00000409542 SBF2Q86WG5 1849 aa18.32■□□□□ 0.52
CHRNA1-205ENST00000409542 ANO8Q9HCE9 1232 aaPredicted RBP18.31■□□□□ 0.52
CHRNA1-205ENST00000409542 CABP1Q9NZU7 370 aa18.31■□□□□ 0.52
CHRNA1-205ENST00000409542 PDGFDQ9GZP0 370 aaPredicted RBP18.3■□□□□ 0.52
CHRNA1-205ENST00000409542 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
CHRNA1-205ENST00000409542 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
CHRNA1-205ENST00000409542 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
CHRNA1-205ENST00000409542 OVOS2A0A0J9YW53 1432 aa18.29■□□□□ 0.52
CHRNA1-205ENST00000409542 OVOS2Q6IE36 1432 aa18.29■□□□□ 0.52
CHRNA1-205ENST00000409542 CENPJQ9HC77 1338 aaPredicted RBP18.29■□□□□ 0.52
CHRNA1-205ENST00000409542 NLRP6P59044 892 aa18.29■□□□□ 0.52
CHRNA1-205ENST00000409542 PROM2Q8N271 834 aa18.29■□□□□ 0.52
CHRNA1-205ENST00000409542 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
CHRNA1-205ENST00000409542 COL18A1P39060 1754 aa18.29■□□□□ 0.52
CHRNA1-205ENST00000409542 SLIT3O75094 1523 aa18.28■□□□□ 0.52
CHRNA1-205ENST00000409542 USP6P35125 1406 aa18.28■□□□□ 0.52
CHRNA1-205ENST00000409542 AATKQ6ZMQ8 1374 aa18.28■□□□□ 0.52
CHRNA1-205ENST00000409542 PLSCR1O15162 318 aa18.27■□□□□ 0.52
CHRNA1-205ENST00000409542 DDB1Q16531 1140 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms