RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 RIOK3O14730 519 aaKnown RBP4.03□□□□□ -1.76
NEB-204ENST00000409198 SASS6Q6UVJ0 657 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 CCDC73Q6ZRK6 1079 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.03□□□□□ -1.76
NEB-204ENST00000409198 DHX37Q8IY37 1157 aaKnown RBP4.03□□□□□ -1.76
NEB-204ENST00000409198 PLCD4Q9BRC7 762 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 HSP90B2PQ58FF3 399 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 ANO2Q9NQ90 1003 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 SMC2O95347 1197 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 POLD1P28340 1107 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 SKIDA1Q1XH10 827 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 MNS1Q8NEH6 495 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 RAB3IL1Q8TBN0 382 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 CEP63Q96MT8 703 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 STRN4Q9NRL3 753 aa4.03□□□□□ -1.76
NEB-204ENST00000409198 XPCQ01831 940 aaPredicted RBP4.03□□□□□ -1.77
NEB-204ENST00000409198 STIM1Q13586 685 aa4.03□□□□□ -1.77
NEB-204ENST00000409198 TOM1O60784 492 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 ZSCAN25Q6NSZ9 544 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 TSNARE1Q96NA8 513 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 SH3BP5O60239 455 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 CPLX3Q8WVH0 158 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 H0YHG0 523 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 SPATA32Q96LK8 384 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 GOLGA6L10A6NI86 522 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 PRC1O43663 620 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 CCDC57Q2TAC2 916 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.02□□□□□ -1.77
NEB-204ENST00000409198 BMS1Q14692 1282 aaKnown RBP4.02□□□□□ -1.77
NEB-204ENST00000409198 CRACR2BQ8N4Y2 399 aaPredicted RBP4.02□□□□□ -1.77
NEB-204ENST00000409198 ZNF592Q92610 1267 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 CNNM1Q9NRU3 951 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 SIN3AQ96ST3 1273 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 FHAD1B1AJZ9 1412 aa4.02□□□□□ -1.77
NEB-204ENST00000409198 TANGO6Q9C0B7 1094 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 ZNF287Q9HBT7 754 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 B4DLN1 442 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 HNRNPMP52272 730 aaKnown RBP eCLIP4.01□□□□□ -1.77
NEB-204ENST00000409198 MRPL12P52815 198 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 UTP14AQ9BVJ6 771 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 KAT6BQ8WYB5 2073 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 NAT10Q9H0A0 1025 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 TSPYL1Q9H0U9 437 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 ERC2O15083 957 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 KMT5BQ4FZB7 885 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 CCDC158Q5M9N0 1113 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 DNAJC2Q99543 621 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 NLRP2Q9NX02 1062 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 SLF2Q8IX21 1173 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 DZIP1LQ8IYY4 767 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 NCBP1Q09161 790 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 CUL5Q93034 780 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 NGLY1Q96IV0 654 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 KTN1Q86UP2 1357 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 BICD2Q8TD16 824 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 RBM27Q9P2N5 1060 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 MYO1BO43795 1136 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 TATP17735 454 aaPredicted RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 PPP1R12BO60237 982 aaPredicted RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 HMGB3O15347 200 aaKnown RBP4.01□□□□□ -1.77
NEB-204ENST00000409198 ROCK1Q13464 1354 aa4.01□□□□□ -1.77
NEB-204ENST00000409198 ADRA2BP18089 450 aa4□□□□□ -1.77
NEB-204ENST00000409198 CCDC89Q8N998 374 aa4□□□□□ -1.77
NEB-204ENST00000409198 PPP1R9BQ96SB3 815 aa4□□□□□ -1.77
NEB-204ENST00000409198 NOL12Q9UGY1 213 aaKnown RBP eCLIP4□□□□□ -1.77
NEB-204ENST00000409198 V9GYY5 206 aaPredicted RBP4□□□□□ -1.77
NEB-204ENST00000409198 NDC80O14777 642 aa4□□□□□ -1.77
NEB-204ENST00000409198 HOOK3Q86VS8 718 aa4□□□□□ -1.77
NEB-204ENST00000409198 GOLGA6L10A0A0M3HER8 536 aa4□□□□□ -1.77
NEB-204ENST00000409198 ZNF526Q8TF50 670 aaPredicted RBP4□□□□□ -1.77
NEB-204ENST00000409198 NOL7Q9UMY1 257 aaKnown RBP4□□□□□ -1.77
NEB-204ENST00000409198 PLEKHO1Q53GL0 409 aaPredicted RBP4□□□□□ -1.77
NEB-204ENST00000409198 DACH1Q9UI36 760 aa4□□□□□ -1.77
NEB-204ENST00000409198 NACAP1Q9BZK3 213 aa4□□□□□ -1.77
NEB-204ENST00000409198 TTC39AQ5SRH9 613 aa4□□□□□ -1.77
NEB-204ENST00000409198 ZNF354CQ86Y25 554 aa4□□□□□ -1.77
NEB-204ENST00000409198 PDE4AP27815 886 aa4□□□□□ -1.77
NEB-204ENST00000409198 ATP6V1E1P36543 226 aa4□□□□□ -1.77
NEB-204ENST00000409198 AIMP1Q12904 312 aaKnown RBP4□□□□□ -1.77
NEB-204ENST00000409198 CCDC14Q49A88 953 aa4□□□□□ -1.77
NEB-204ENST00000409198 PROSER2Q86WR7 435 aaPredicted RBP4□□□□□ -1.77
NEB-204ENST00000409198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4□□□□□ -1.77
NEB-204ENST00000409198 VGFO15240 615 aaPredicted RBP4□□□□□ -1.77
NEB-204ENST00000409198 ATF7IPQ6VMQ6 1270 aa4□□□□□ -1.77
NEB-204ENST00000409198 CEP162Q5TB80 1403 aa4□□□□□ -1.77
NEB-204ENST00000409198 CEP135Q66GS9 1140 aa4□□□□□ -1.77
NEB-204ENST00000409198 TAX1BP1Q86VP1 789 aa4□□□□□ -1.77
NEB-204ENST00000409198 GPRASP1Q5JY77 1395 aa3.99□□□□□ -1.77
NEB-204ENST00000409198 CCP110O43303 1012 aa3.99□□□□□ -1.77
NEB-204ENST00000409198 CCDC69A6NI79 296 aa3.99□□□□□ -1.77
NEB-204ENST00000409198 ERLIN1O75477 346 aa3.99□□□□□ -1.77
NEB-204ENST00000409198 NUCB2P80303 420 aa3.99□□□□□ -1.77
NEB-204ENST00000409198 CACYBPQ9HB71 228 aaKnown RBP3.99□□□□□ -1.77
NEB-204ENST00000409198 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.99□□□□□ -1.77
NEB-204ENST00000409198 FOXD4L1Q9NU39 408 aa3.99□□□□□ -1.77
NEB-204ENST00000409198 SMG6Q86US8 1419 aaKnown RBP3.99□□□□□ -1.77
NEB-204ENST00000409198 LMAN1P49257 510 aa3.99□□□□□ -1.77
NEB-204ENST00000409198 ZPR1O75312 459 aa3.99□□□□□ -1.77
NEB-204ENST00000409198 SREK1Q8WXA9 508 aaKnown RBP3.99□□□□□ -1.77
NEB-204ENST00000409198 FOXD4L5Q5VV16 416 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms