RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 WDR43Q15061 677 aaKnown RBP eCLIP5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 ARIH1Q9Y4X5 557 aaPredicted RBP5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 PELP1Q8IZL8 1130 aaKnown RBP5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 NPC1L1Q9UHC9 1359 aa5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 YTHDC2Q9H6S0 1430 aaKnown RBP5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 IRX5P78411 483 aaPredicted RBP5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 MORC1Q86VD1 984 aa5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 TNRQ92752 1358 aa5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 NSD3Q9BZ95 1437 aa5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 SPATA31D1Q6ZQQ2 1576 aa5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 MYO3AQ8NEV4 1616 aa5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 MYOM1P52179 1685 aa5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 HDGFP51858 240 aaKnown RBP5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 WAPLQ7Z5K2 1190 aa5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 ATN1P54259 1190 aaPredicted RBP5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 SMG6Q86US8 1419 aaKnown RBP5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 QRICH2Q9H0J4 1663 aa5.3□□□□□ -1.56
LRRTM4-201ENST00000409088 PUS7Q96PZ0 661 aaKnown RBP5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 TSPYL2Q9H2G4 693 aaPredicted RBP5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 ALKQ9UM73 1620 aa5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 PDAP1Q13442 181 aaKnown RBP5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 PCDHB13Q9Y5F0 798 aa5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 CGNL1Q0VF96 1302 aa5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 IFNL1Q8IU54 200 aa5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 CDCA7LQ96GN5 454 aa5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 CDK19Q9BWU1 502 aa5.29□□□□□ -1.56
LRRTM4-201ENST00000409088 TXNDC2Q86VQ3 553 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 TULP4Q9NRJ4 1543 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 ARHGEF28Q8N1W1 1705 aaKnown RBP5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 CCDC146Q8IYE0 955 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 PTPRMP28827 1452 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 ANKRD36BQ8N2N9 1353 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 PDE3BQ13370 1112 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 DCAF8Q5TAQ9 597 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 CABP1Q9NZU7 370 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 METRNQ9UJH8 293 aa5.28□□□□□ -1.56
LRRTM4-201ENST00000409088 PLEKHH1Q9ULM0 1364 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 TERF2IPQ9NYB0 399 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 METP08581 1390 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 ATAD2Q6PL18 1390 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 TMEM2Q9UHN6 1383 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 POTEFA5A3E0 1075 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 LTKP29376 864 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 MTHFSP49914 203 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 GGNBP2Q9H3C7 697 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 BLMP54132 1417 aaPredicted RBP5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 RGL2O15211 777 aa5.27□□□□□ -1.57
LRRTM4-201ENST00000409088 A0A1W2PP64 1363 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 INSRP06213 1382 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 ABCC11Q96J66 1382 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 APAF1O14727 1248 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 ERICH6BQ5W0A0 696 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 HDGFL2Q7Z4V5 671 aaPredicted RBP5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 SLC26A8Q96RN1 970 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 PPP4R2Q9NY27 417 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 RCAN3Q9UKA8 241 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 EID1Q9Y6B2 187 aa5.26□□□□□ -1.57
LRRTM4-201ENST00000409088 WASLO00401 505 aaPredicted RBP5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 FYB1O15117 783 aa5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 B4GALNT3Q6L9W6 998 aa5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 CFAP53Q96M91 514 aa5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 OCEL1Q9H607 264 aa5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 POLR3AO14802 1390 aaPredicted RBP5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 NINLQ9Y2I6 1382 aa5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 OTUD5Q96G74 571 aa5.25□□□□□ -1.57
LRRTM4-201ENST00000409088 NEUROD2Q15784 382 aa5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 THEMISQ8N1K5 641 aaPredicted RBP5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 TMEM121BQ9BXQ6 578 aaPredicted RBP5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 RNF123Q5XPI4 1314 aa5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 NCKAP5LQ9HCH0 1330 aa5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 NSD2O96028 1365 aa5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 NUTM2FA1L443 756 aa5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 PRKCSHP14314 528 aaPredicted RBP5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 GOLGA2Q08379 1002 aa5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 RRP1P56182 461 aaKnown RBP5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 RNF25Q96BH1 459 aaPredicted RBP5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 NUDT16Q96DE0 195 aaKnown RBP5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 L3MBTL3Q96JM7 780 aaPredicted RBP5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 NLRP1Q9C000 1473 aa5.24□□□□□ -1.57
LRRTM4-201ENST00000409088 U2AF1L5P0DN76 240 aaPredicted RBP5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 U2AF1Q01081 240 aaKnown RBP eCLIP5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 SPRYD3Q8NCJ5 442 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 SIRT1Q96EB6 747 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 DLC1Q96QB1 1528 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 ADAMTS13Q76LX8 1427 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 FBLN1P23142 703 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 TSHZ2Q9NRE2 1034 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 RRP7AQ9Y3A4 280 aaKnown RBP5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 NRXN3Q9Y4C0 1643 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 ROBO2Q9HCK4 1378 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 PLEKHG1Q9ULL1 1385 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 U2SURPO15042 1029 aaKnown RBP5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 PLIN1O60240 522 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 DUSP27Q5VZP5 1158 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 CD163L1Q9NR16 1453 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 ZNF521Q96K83 1311 aa5.23□□□□□ -1.57
LRRTM4-201ENST00000409088 UBR1Q8IWV7 1749 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms