RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 TRPM3Q9HCF6 1732 aaPredicted RBP26.32■■□□□ 1.8
PTPN18-203ENST00000409022 PPIP5K1Q6PFW1 1433 aa26.31■■□□□ 1.8
PTPN18-203ENST00000409022 QRICH2Q9H0J4 1663 aa26.3■■□□□ 1.8
PTPN18-203ENST00000409022 BRD4O60885 1362 aaPredicted RBP26.3■■□□□ 1.8
PTPN18-203ENST00000409022 UPF1Q92900 1129 aaKnown RBP eCLIP26.29■■□□□ 1.83e-7■■■□□ 14.6
PTPN18-203ENST00000409022 TOPAZ1Q8N9V7 1692 aa26.28■■□□□ 1.8
PTPN18-203ENST00000409022 ALS2Q96Q42 1657 aa26.28■■□□□ 1.8
PTPN18-203ENST00000409022 FAM83GA6ND36 823 aa26.27■■□□□ 1.8
PTPN18-203ENST00000409022 VPS72Q15906 364 aa26.27■■□□□ 1.8
PTPN18-203ENST00000409022 CCDC9Q9Y3X0 531 aaKnown RBP26.27■■□□□ 1.8
PTPN18-203ENST00000409022 ATAD2Q6PL18 1390 aa26.26■■□□□ 1.79
PTPN18-203ENST00000409022 ABTB2Q8N961 1025 aa26.26■■□□□ 1.79
PTPN18-203ENST00000409022 CABP1Q9NZU7 370 aa26.26■■□□□ 1.79
PTPN18-203ENST00000409022 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.25■■□□□ 1.79
PTPN18-203ENST00000409022 RALGAPBQ86X10 1494 aa26.25■■□□□ 1.79
PTPN18-203ENST00000409022 PRDM11Q9NQV5 511 aa26.25■■□□□ 1.79
PTPN18-203ENST00000409022 SBNO2Q9Y2G9 1366 aa26.23■■□□□ 1.79
PTPN18-203ENST00000409022 BTG4Q9NY30 223 aa26.23■■□□□ 1.79
PTPN18-203ENST00000409022 ABCA3Q99758 1704 aa26.22■■□□□ 1.79
PTPN18-203ENST00000409022 NLRP13Q86W25 1043 aa26.22■■□□□ 1.79
PTPN18-203ENST00000409022 NWD2Q9ULI1 1742 aa26.2■■□□□ 1.79
PTPN18-203ENST00000409022 NUTM2GQ5VZR2 741 aa26.2■■□□□ 1.78
PTPN18-203ENST00000409022 ZNF692Q9BU19 519 aaPredicted RBP26.2■■□□□ 1.78
PTPN18-203ENST00000409022 SLC24A1O60721 1099 aa26.19■■□□□ 1.78
PTPN18-203ENST00000409022 CLSPNQ9HAW4 1339 aa26.17■■□□□ 1.78
PTPN18-203ENST00000409022 USP6P35125 1406 aa26.17■■□□□ 1.78
PTPN18-203ENST00000409022 PLCH1Q4KWH8 1693 aa26.17■■□□□ 1.78
PTPN18-203ENST00000409022 COL14A1Q05707 1796 aaKnown RBP26.17■■□□□ 1.78
PTPN18-203ENST00000409022 KIAA0232Q92628 1395 aa26.17■■□□□ 1.78
PTPN18-203ENST00000409022 TIMELESSQ9UNS1 1208 aa26.15■■□□□ 1.78
PTPN18-203ENST00000409022 ZC3H6P61129 1189 aaKnown RBP26.14■■□□□ 1.78
PTPN18-203ENST00000409022 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.78
PTPN18-203ENST00000409022 USP19O94966 1318 aa26.14■■□□□ 1.77
PTPN18-203ENST00000409022 GLI3P10071 1580 aa26.13■■□□□ 1.77
PTPN18-203ENST00000409022 A0A0G2JS52 829 aa26.13■■□□□ 1.77
PTPN18-203ENST00000409022 MYT1Q01538 1121 aa26.13■■□□□ 1.77
PTPN18-203ENST00000409022 SEPT12Q8IYM1 358 aa26.13■■□□□ 1.77
PTPN18-203ENST00000409022 ONECUT3O60422 494 aaPredicted RBP26.12■■□□□ 1.77
PTPN18-203ENST00000409022 NLRP6P59044 892 aa26.12■■□□□ 1.77
PTPN18-203ENST00000409022 CCDC125Q86Z20 511 aa26.12■■□□□ 1.77
PTPN18-203ENST00000409022 CPDO75976 1380 aa26.1■■□□□ 1.77
PTPN18-203ENST00000409022 GCP02774 474 aa26.1■■□□□ 1.77
PTPN18-203ENST00000409022 CHRNA2Q15822 529 aa26.1■■□□□ 1.77
PTPN18-203ENST00000409022 PUS7Q96PZ0 661 aaKnown RBP26.1■■□□□ 1.77
PTPN18-203ENST00000409022 CRYBG1Q9Y4K1 1723 aa26.1■■□□□ 1.77
PTPN18-203ENST00000409022 EVA1CP58658 441 aa26.09■■□□□ 1.77
PTPN18-203ENST00000409022 TTC21AQ8NDW8 1320 aa26.09■■□□□ 1.77
PTPN18-203ENST00000409022 PHRF1Q9P1Y6 1649 aaKnown RBP26.08■■□□□ 1.77
PTPN18-203ENST00000409022 SPATA31A5Q5VU36 1347 aa26.08■■□□□ 1.77
PTPN18-203ENST00000409022 SPATA31A7Q8IWB4 1347 aa26.08■■□□□ 1.77
PTPN18-203ENST00000409022 TMC1Q8TDI8 760 aa26.07■■□□□ 1.76
PTPN18-203ENST00000409022 STRN4Q9NRL3 753 aa26.07■■□□□ 1.76
PTPN18-203ENST00000409022 TTC21BQ7Z4L5 1316 aa26.07■■□□□ 1.76
PTPN18-203ENST00000409022 KTN1Q86UP2 1357 aaKnown RBP26.07■■□□□ 1.76
PTPN18-203ENST00000409022 SSH2Q76I76 1423 aa26.06■■□□□ 1.76
PTPN18-203ENST00000409022 FAM98CQ17RN3 349 aaKnown RBP26.06■■□□□ 1.76
PTPN18-203ENST00000409022 KRT27Q7Z3Y8 459 aa26.06■■□□□ 1.76
PTPN18-203ENST00000409022 HDGFL2Q7Z4V5 671 aaPredicted RBP26.06■■□□□ 1.76
PTPN18-203ENST00000409022 NRAPQ86VF7 1730 aa26.05■■□□□ 1.76
PTPN18-203ENST00000409022 CPSF1Q10570 1443 aaKnown RBP26.05■■□□□ 1.76
PTPN18-203ENST00000409022 NRKQ7Z2Y5 1582 aa26.04■■□□□ 1.76
PTPN18-203ENST00000409022 ST20-MTHFSA0A0A6YYL1 179 aa26.04■■□□□ 1.76
PTPN18-203ENST00000409022 KCNH5Q8NCM2 988 aa26.04■■□□□ 1.76
PTPN18-203ENST00000409022 TERF2IPQ9NYB0 399 aa26.03■■□□□ 1.76
PTPN18-203ENST00000409022 SF3B2Q13435 895 aaKnown RBP26.01■■□□□ 1.75
PTPN18-203ENST00000409022 SPATA31A1Q5TZJ5 1347 aa26.01■■□□□ 1.75
PTPN18-203ENST00000409022 NINLQ9Y2I6 1382 aa26■■□□□ 1.75
PTPN18-203ENST00000409022 ZBTB7CA1YPR0 619 aa26■■□□□ 1.75
PTPN18-203ENST00000409022 TESK2Q96S53 571 aa25.99■■□□□ 1.75
PTPN18-203ENST00000409022 SLIT3O75094 1523 aa25.98■■□□□ 1.75
PTPN18-203ENST00000409022 BLMP54132 1417 aaPredicted RBP25.97■■□□□ 1.75
PTPN18-203ENST00000409022 AATKQ6ZMQ8 1374 aa25.97■■□□□ 1.75
PTPN18-203ENST00000409022 USP47Q96K76 1375 aa25.97■■□□□ 1.75
PTPN18-203ENST00000409022 TMF1P82094 1093 aa25.97■■□□□ 1.75
PTPN18-203ENST00000409022 CCER1Q8TC90 406 aaPredicted RBP25.97■■□□□ 1.75
PTPN18-203ENST00000409022 SLC12A5Q9H2X9 1139 aa25.97■■□□□ 1.75
PTPN18-203ENST00000409022 CDCA8Q53HL2 280 aa25.96■■□□□ 1.75
PTPN18-203ENST00000409022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.95■■□□□ 1.74
PTPN18-203ENST00000409022 USP35Q9P2H5 1018 aa25.95■■□□□ 1.74
PTPN18-203ENST00000409022 THRAP3Q9Y2W1 955 aaKnown RBP25.95■■□□□ 1.74
PTPN18-203ENST00000409022 BARGINQ6ZT62 677 aa25.94■■□□□ 1.74
PTPN18-203ENST00000409022 TCP11L2Q8N4U5 519 aa25.94■■□□□ 1.74
PTPN18-203ENST00000409022 AKAP12Q02952 1782 aa25.94■■□□□ 1.74
PTPN18-203ENST00000409022 PIK3C2AO00443 1686 aa25.93■■□□□ 1.74
PTPN18-203ENST00000409022 CAMTA1Q9Y6Y1 1673 aa25.93■■□□□ 1.74
PTPN18-203ENST00000409022 LARP1Q6PKG0 1096 aaKnown RBP25.93■■□□□ 1.74
PTPN18-203ENST00000409022 EDC4Q6P2E9 1401 aaKnown RBP25.93■■□□□ 1.74
PTPN18-203ENST00000409022 SOX12O15370 315 aa25.91■■□□□ 1.74
PTPN18-203ENST00000409022 USP31Q70CQ4 1352 aa25.91■■□□□ 1.74
PTPN18-203ENST00000409022 COL5A2P05997 1499 aaPredicted RBP25.91■■□□□ 1.74
PTPN18-203ENST00000409022 LMO7Q8WWI1 1683 aa25.9■■□□□ 1.74
PTPN18-203ENST00000409022 ARHGEF25Q86VW2 580 aa25.9■■□□□ 1.74
PTPN18-203ENST00000409022 A0A1W2PP64 1363 aa25.9■■□□□ 1.74
PTPN18-203ENST00000409022 CD163L1Q9NR16 1453 aa25.9■■□□□ 1.74
PTPN18-203ENST00000409022 PDE3BQ13370 1112 aa25.89■■□□□ 1.74
PTPN18-203ENST00000409022 CRB1P82279 1406 aa25.88■■□□□ 1.73
PTPN18-203ENST00000409022 MON2Q7Z3U7 1717 aa25.88■■□□□ 1.73
PTPN18-203ENST00000409022 EP400Q96L91 3159 aa25.87■■□□□ 1.73
PTPN18-203ENST00000409022 BRWD3Q6RI45 1802 aa25.87■■□□□ 1.73
PTPN18-203ENST00000409022 TOM1L2Q6ZVM7 507 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms