RNA–Protein interactions for RNA: ENST00000408712.1

SNORA3.3-201, humanhuman

BASIC

Gene SNORA3, Length 125 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA3.3-201ENST00000408712 NUTM2GQ5VZR2 741 aa5.37□□□□□ -1.55
SNORA3.3-201ENST00000408712 PRDM11Q9NQV5 511 aa5.37□□□□□ -1.55
SNORA3.3-201ENST00000408712 TTC21AQ8NDW8 1320 aa5.37□□□□□ -1.55
SNORA3.3-201ENST00000408712 POLR3AO14802 1390 aaPredicted RBP5.37□□□□□ -1.55
SNORA3.3-201ENST00000408712 ATAD2Q6PL18 1390 aa5.37□□□□□ -1.55
SNORA3.3-201ENST00000408712 LAMC1P11047 1609 aa5.37□□□□□ -1.55
SNORA3.3-201ENST00000408712 SETD1AO15047 1707 aaKnown RBP5.37□□□□□ -1.55
SNORA3.3-201ENST00000408712 TESK2Q96S53 571 aa5.36□□□□□ -1.55
SNORA3.3-201ENST00000408712 THRAP3Q9Y2W1 955 aaKnown RBP5.36□□□□□ -1.55
SNORA3.3-201ENST00000408712 TTC21BQ7Z4L5 1316 aa5.36□□□□□ -1.55
SNORA3.3-201ENST00000408712 KIAA1210Q9ULL0 1709 aa5.36□□□□□ -1.55
SNORA3.3-201ENST00000408712 COL16A1Q07092 1604 aaPredicted RBP5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 MED1Q15648 1581 aaPredicted RBP5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 CDC42BPGQ6DT37 1551 aa5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 SBNO2Q9Y2G9 1366 aa5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 PDE3BQ13370 1112 aa5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 SF3B2Q13435 895 aaKnown RBP5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 SEPT12Q8IYM1 358 aa5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 UPF1Q92900 1129 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNORA3.3-201ENST00000408712 KNDC1Q76NI1 1749 aa5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 PXDNQ92626 1479 aa5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 TNS3Q68CZ2 1445 aa5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 PPIP5K1Q6PFW1 1433 aa5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 KTN1Q86UP2 1357 aaKnown RBP5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 BARGINQ6ZT62 677 aa5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 KRT27Q7Z3Y8 459 aa5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 ARHGEF25Q86VW2 580 aa5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 COG3Q96JB2 828 aa5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 CDCA7Q9BWT1 371 aaPredicted RBP5.34□□□□□ -1.55
SNORA3.3-201ENST00000408712 TULP4Q9NRJ4 1543 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 NINLQ9Y2I6 1382 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 SPATA31A5Q5VU36 1347 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 SPATA31A7Q8IWB4 1347 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 EXOC5O00471 708 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 CHRNA2Q15822 529 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 FAM196AQ6ZSG2 479 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 TCP11L2Q8N4U5 519 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 STRN4Q9NRL3 753 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 NALCNQ8IZF0 1738 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 SHPRHQ149N8 1683 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 NHSL1Q5SYE7 1610 aa5.33□□□□□ -1.56
SNORA3.3-201ENST00000408712 BCL9LQ86UU0 1499 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 CDK12Q9NYV4 1490 aaPredicted RBP5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 RGPD8O14715 1765 aaPredicted RBP5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 FMN2Q9NZ56 1722 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 A0A0G2JS52 829 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 ZBTB7CA1YPR0 619 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 FYB1O15117 783 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 CSB-PGBD3P0DP91 1061 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 MYT1Q01538 1121 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 FAM98CQ17RN3 349 aaKnown RBP5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 TOM1L2Q6ZVM7 507 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 IP6K1Q92551 441 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 CARD10Q9BWT7 1032 aa5.32□□□□□ -1.56
SNORA3.3-201ENST00000408712 ATRNO75882 1429 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 CPSF1Q10570 1443 aaKnown RBP5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 CPDO75976 1380 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 KIAA0232Q92628 1395 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 KIF1AQ12756 1690 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 LRP6O75581 1613 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 SPATA31A1Q5TZJ5 1347 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 HSPA5P11021 654 aaKnown RBP5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 HMGB2P26583 209 aaKnown RBP5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 AMPHP49418 695 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 LARP1Q6PKG0 1096 aaKnown RBP5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 USP35Q9P2H5 1018 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 AXIN2Q9Y2T1 843 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 SLIT2O94813 1529 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 USP6P35125 1406 aa5.31□□□□□ -1.56
SNORA3.3-201ENST00000408712 AATKQ6ZMQ8 1374 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 USP31Q70CQ4 1352 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 USP47Q96K76 1375 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 ADGRB2O60241 1585 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 USP19O94966 1318 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 SOX12O15370 315 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 DDB1Q16531 1140 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 NME9Q86XW9 330 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 POLR3GLQ9BT43 218 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 PANK3Q9H999 370 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 KNSTRNQ9Y448 316 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 ATP7BP35670 1465 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 RALGAPBQ86X10 1494 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 SSH2Q76I76 1423 aa5.3□□□□□ -1.56
SNORA3.3-201ENST00000408712 BAG6P46379 1132 aa5.29□□□□□ -1.56
SNORA3.3-201ENST00000408712 CARD14Q9BXL6 1004 aa5.29□□□□□ -1.56
SNORA3.3-201ENST00000408712 NLRP2Q9NX02 1062 aa5.29□□□□□ -1.56
SNORA3.3-201ENST00000408712 ZRANB1Q9UGI0 708 aa5.29□□□□□ -1.56
SNORA3.3-201ENST00000408712 TRPM1Q7Z4N2 1603 aa5.29□□□□□ -1.56
SNORA3.3-201ENST00000408712 KAT6BQ8WYB5 2073 aa5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 CGNL1Q0VF96 1302 aa5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 WDR17Q8IZU2 1322 aa5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 COL22A1Q8NFW1 1626 aaPredicted RBP5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 ANKRD24Q8TF21 1146 aa5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 GGNBP2Q9H3C7 697 aa5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 EDC4Q6P2E9 1401 aaKnown RBP5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 ARHGEF28Q8N1W1 1705 aaKnown RBP5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 ANKRD36BQ8N2N9 1353 aa5.28□□□□□ -1.56
SNORA3.3-201ENST00000408712 USP32Q8NFA0 1604 aa5.27□□□□□ -1.57
SNORA3.3-201ENST00000408712 PLSCR1O15162 318 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms