RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PAXIP1Q6ZW49 1069 aaPredicted RBP15.74■□□□□ 0.11
HERC3-203ENST00000407637 DZIP1LQ8IYY4 767 aaKnown RBP15.74■□□□□ 0.11
HERC3-203ENST00000407637 NUP153P49790 1475 aaKnown RBP15.74■□□□□ 0.11
HERC3-203ENST00000407637 CFAP74Q9C0B2 1584 aa15.74■□□□□ 0.11
HERC3-203ENST00000407637 NSFL1CQ9UNZ2 370 aaKnown RBP15.74■□□□□ 0.11
HERC3-203ENST00000407637 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
HERC3-203ENST00000407637 CYP2E1P05181 493 aaPredicted RBP15.73■□□□□ 0.11
HERC3-203ENST00000407637 MAPK8IP2Q13387 824 aaPredicted RBP15.73■□□□□ 0.11
HERC3-203ENST00000407637 NOLC1Q14978 699 aaKnown RBP eCLIP15.73■□□□□ 0.11
HERC3-203ENST00000407637 ZKSCAN2Q63HK3 967 aa15.73■□□□□ 0.11
HERC3-203ENST00000407637 PIBF1Q8WXW3 757 aa15.73■□□□□ 0.11
HERC3-203ENST00000407637 CHAMP1Q96JM3 812 aa15.73■□□□□ 0.11
HERC3-203ENST00000407637 CDC42BPAQ5VT25 1732 aa15.73■□□□□ 0.11
HERC3-203ENST00000407637 C9orf84Q5VXU9 1444 aa15.73■□□□□ 0.11
HERC3-203ENST00000407637 NUCB2P80303 420 aa15.73■□□□□ 0.11
HERC3-203ENST00000407637 ITPRIPQ8IWB1 547 aa15.72■□□□□ 0.11
HERC3-203ENST00000407637 CCDC141Q6ZP82 1450 aa15.71■□□□□ 0.1
HERC3-203ENST00000407637 IRX5P78411 483 aaPredicted RBP15.7■□□□□ 0.1
HERC3-203ENST00000407637 NPC1L1Q9UHC9 1359 aa15.7■□□□□ 0.1
HERC3-203ENST00000407637 PBRM1Q86U86 1689 aa15.7■□□□□ 0.1
HERC3-203ENST00000407637 NUCB1Q02818 461 aa15.7■□□□□ 0.1
HERC3-203ENST00000407637 TBC1D9Q6ZT07 1266 aa15.7■□□□□ 0.1
HERC3-203ENST00000407637 IQSEC2Q5JU85 1478 aa15.69■□□□□ 0.1
HERC3-203ENST00000407637 BMP2KLQ5H9B9 411 aa15.69■□□□□ 0.1
HERC3-203ENST00000407637 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
HERC3-203ENST00000407637 SHPRHQ149N8 1683 aa15.69■□□□□ 0.1
HERC3-203ENST00000407637 TROQ12816 1431 aaPredicted RBP15.68■□□□□ 0.1
HERC3-203ENST00000407637 FKBP5Q13451 457 aaPredicted RBP15.68■□□□□ 0.1
HERC3-203ENST00000407637 IQGAP1P46940 1657 aa15.68■□□□□ 0.1
HERC3-203ENST00000407637 RAPGEF6Q8TEU7 1601 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 TRIM27P14373 513 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 KCNJ4P48050 445 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 TCP11L2Q8N4U5 519 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 ANKRD7Q92527 254 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 PLA2R1Q13018 1463 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 NUP160Q12769 1436 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 CHD1LQ86WJ1 897 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 DDX19BQ9UMR2 479 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 SHANK2Q9UPX8 1470 aa15.67■□□□□ 0.1
HERC3-203ENST00000407637 TSPY26PQ9H489 355 aa15.66■□□□□ 0.1
HERC3-203ENST00000407637 SMC4Q9NTJ3 1288 aa15.66■□□□□ 0.1
HERC3-203ENST00000407637 RIOK3O14730 519 aaKnown RBP15.65■□□□□ 0.1
HERC3-203ENST00000407637 ZGPATQ8N5A5 531 aaKnown RBP15.65■□□□□ 0.1
HERC3-203ENST00000407637 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
HERC3-203ENST00000407637 WDR63Q8IWG1 891 aa15.65■□□□□ 0.1
HERC3-203ENST00000407637 SPTLC3Q9NUV7 552 aa15.65■□□□□ 0.1
HERC3-203ENST00000407637 CEP152O94986 1710 aa15.65■□□□□ 0.1
HERC3-203ENST00000407637 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.1
HERC3-203ENST00000407637 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.1
HERC3-203ENST00000407637 RUNDC1Q96C34 613 aa15.64■□□□□ 0.1
HERC3-203ENST00000407637 CDCA8Q53HL2 280 aa15.64■□□□□ 0.09
HERC3-203ENST00000407637 FEZ1Q99689 392 aa15.64■□□□□ 0.09
HERC3-203ENST00000407637 USP25Q9UHP3 1055 aa15.64■□□□□ 0.09
HERC3-203ENST00000407637 OGFRQ9NZT2 677 aa15.63■□□□□ 0.09
HERC3-203ENST00000407637 RABEP1Q15276 862 aa15.63■□□□□ 0.09
HERC3-203ENST00000407637 TMEM57Q8N5G2 664 aa15.63■□□□□ 0.09
HERC3-203ENST00000407637 KDM5AP29375 1690 aaKnown RBP15.62■□□□□ 0.09
HERC3-203ENST00000407637 POLR3AO14802 1390 aaPredicted RBP15.62■□□□□ 0.09
HERC3-203ENST00000407637 SYNJ2O15056 1496 aa15.62■□□□□ 0.09
HERC3-203ENST00000407637 GABPB1Q06547 395 aaPredicted RBP15.62■□□□□ 0.09
HERC3-203ENST00000407637 RSPH4AQ5TD94 716 aa15.62■□□□□ 0.09
HERC3-203ENST00000407637 TSR2Q969E8 191 aaKnown RBP15.62■□□□□ 0.09
HERC3-203ENST00000407637 ZBTB40Q9NUA8 1239 aa15.62■□□□□ 0.09
HERC3-203ENST00000407637 MBD3O95983 291 aa15.61■□□□□ 0.09
HERC3-203ENST00000407637 CHMP4AQ9BY43 222 aa15.61■□□□□ 0.09
HERC3-203ENST00000407637 SLFN14P0C7P3 912 aa15.61■□□□□ 0.09
HERC3-203ENST00000407637 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
HERC3-203ENST00000407637 KANK1Q14678 1352 aa15.61■□□□□ 0.09
HERC3-203ENST00000407637 ANKRD45Q5TZF3 282 aa15.61■□□□□ 0.09
HERC3-203ENST00000407637 ATF7IPQ6VMQ6 1270 aa15.61■□□□□ 0.09
HERC3-203ENST00000407637 CHAF1AQ13111 956 aaPredicted RBP15.6■□□□□ 0.09
HERC3-203ENST00000407637 DIAPH3Q9NSV4 1193 aa15.6■□□□□ 0.09
HERC3-203ENST00000407637 CTIFO43310 598 aaKnown RBP15.6■□□□□ 0.09
HERC3-203ENST00000407637 CWC22Q9HCG8 908 aaKnown RBP15.6■□□□□ 0.09
HERC3-203ENST00000407637 KIAA0556O60303 1618 aa15.59■□□□□ 0.09
HERC3-203ENST00000407637 ADCY5O95622 1261 aa15.59■□□□□ 0.09
HERC3-203ENST00000407637 TSPY4P0CV99 314 aa15.59■□□□□ 0.09
HERC3-203ENST00000407637 TSPY10P0CW01 314 aa15.59■□□□□ 0.09
HERC3-203ENST00000407637 SSH1Q8WYL5 1049 aa15.59■□□□□ 0.09
HERC3-203ENST00000407637 NCBP1Q09161 790 aaKnown RBP15.59■□□□□ 0.09
HERC3-203ENST00000407637 NOB1Q9ULX3 412 aaKnown RBP15.59■□□□□ 0.09
HERC3-203ENST00000407637 CDC45O75419 566 aa15.58■□□□□ 0.08
HERC3-203ENST00000407637 CARD14Q9BXL6 1004 aa15.58■□□□□ 0.08
HERC3-203ENST00000407637 CCDC66A2RUB6 948 aa15.58■□□□□ 0.08
HERC3-203ENST00000407637 DNAJC2Q99543 621 aaKnown RBP15.58■□□□□ 0.08
HERC3-203ENST00000407637 CTNNA3Q9UI47 895 aa15.58■□□□□ 0.08
HERC3-203ENST00000407637 MADDQ8WXG6 1647 aa15.58■□□□□ 0.08
HERC3-203ENST00000407637 EXOSC9Q06265 439 aaKnown RBP15.57■□□□□ 0.08
HERC3-203ENST00000407637 TIGD1Q96MW7 591 aa15.57■□□□□ 0.08
HERC3-203ENST00000407637 PYCARDQ9ULZ3 195 aa15.57■□□□□ 0.08
HERC3-203ENST00000407637 SLC20A2Q08357 652 aa15.56■□□□□ 0.08
HERC3-203ENST00000407637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.56■□□□□ 0.08
HERC3-203ENST00000407637 CCDC27Q2M243 656 aa15.55■□□□□ 0.08
HERC3-203ENST00000407637 SCAF11Q99590 1463 aaKnown RBP15.55■□□□□ 0.08
HERC3-203ENST00000407637 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
HERC3-203ENST00000407637 CAPN2P17655 700 aa15.55■□□□□ 0.08
HERC3-203ENST00000407637 KIAA1524Q8TCG1 905 aa15.55■□□□□ 0.08
HERC3-203ENST00000407637 SYAP1Q96A49 352 aaPredicted RBP15.55■□□□□ 0.08
HERC3-203ENST00000407637 CERS3Q8IU89 383 aa15.54■□□□□ 0.08
HERC3-203ENST00000407637 KCNF1Q9H3M0 494 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms