RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 AK7Q96M32 723 aa18.43■□□□□ 0.54
PPM1F-203ENST00000407142 PNISRQ8TF01 805 aaKnown RBP18.42■□□□□ 0.54
PPM1F-203ENST00000407142 CCDC27Q2M243 656 aa18.42■□□□□ 0.54
PPM1F-203ENST00000407142 RUFY1Q96T51 708 aa18.42■□□□□ 0.54
PPM1F-203ENST00000407142 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
PPM1F-203ENST00000407142 CABP4P57796 275 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 PIP4K2BP78356 416 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 CNTLNQ9NXG0 1405 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 PRDM11Q9NQV5 511 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 VPS37CA5D8V6 355 aaPredicted RBP18.41■□□□□ 0.54
PPM1F-203ENST00000407142 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 NASPP49321 788 aaPredicted RBP18.41■□□□□ 0.54
PPM1F-203ENST00000407142 CCDC43Q96MW1 224 aaKnown RBP18.41■□□□□ 0.54
PPM1F-203ENST00000407142 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 GNAI3P08754 354 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 WASHC4Q2M389 1173 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 C22orf23Q9BZE7 217 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
PPM1F-203ENST00000407142 ERBINQ96RT1 1412 aa18.4■□□□□ 0.54
PPM1F-203ENST00000407142 INTS3Q68E01 1043 aaKnown RBP18.4■□□□□ 0.54
PPM1F-203ENST00000407142 CDR1P51861 262 aa18.4■□□□□ 0.54
PPM1F-203ENST00000407142 HSP90B2PQ58FF3 399 aa18.4■□□□□ 0.54
PPM1F-203ENST00000407142 RALYLQ86SE5 291 aaKnown RBP18.4■□□□□ 0.54
PPM1F-203ENST00000407142 TBC1D2BQ9UPU7 963 aa18.4■□□□□ 0.54
PPM1F-203ENST00000407142 PRKAR2BP31323 418 aa18.39■□□□□ 0.54
PPM1F-203ENST00000407142 RRP12Q5JTH9 1297 aaKnown RBP18.39■□□□□ 0.53
PPM1F-203ENST00000407142 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
PPM1F-203ENST00000407142 CABP1Q9NZU7 370 aa18.39■□□□□ 0.53
PPM1F-203ENST00000407142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.38■□□□□ 0.53
PPM1F-203ENST00000407142 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
PPM1F-203ENST00000407142 FAM177BA6PVY3 158 aa18.38■□□□□ 0.53
PPM1F-203ENST00000407142 CCDC73Q6ZRK6 1079 aa18.38■□□□□ 0.53
PPM1F-203ENST00000407142 NINLQ9Y2I6 1382 aa18.38■□□□□ 0.53
PPM1F-203ENST00000407142 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
PPM1F-203ENST00000407142 ATAD2Q6PL18 1390 aa18.37■□□□□ 0.53
PPM1F-203ENST00000407142 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
PPM1F-203ENST00000407142 FYB1O15117 783 aa18.36■□□□□ 0.53
PPM1F-203ENST00000407142 SAFBQ15424 915 aaKnown RBP eCLIP18.36■□□□□ 0.53
PPM1F-203ENST00000407142 PRXQ9BXM0 1461 aa18.36■□□□□ 0.53
PPM1F-203ENST00000407142 CWC15Q9P013 229 aaKnown RBP18.36■□□□□ 0.53
PPM1F-203ENST00000407142 GNL3LQ9NVN8 582 aaKnown RBP18.35■□□□□ 0.53
PPM1F-203ENST00000407142 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
PPM1F-203ENST00000407142 PPP1R1BQ9UD71 204 aaPredicted RBP18.35■□□□□ 0.53
PPM1F-203ENST00000407142 TCP11L2Q8N4U5 519 aa18.35■□□□□ 0.53
PPM1F-203ENST00000407142 DAPK1P53355 1430 aa18.34■□□□□ 0.53
PPM1F-203ENST00000407142 CLASRPQ8N2M8 674 aaKnown RBP18.34■□□□□ 0.53
PPM1F-203ENST00000407142 CCDC66A2RUB6 948 aa18.34■□□□□ 0.53
PPM1F-203ENST00000407142 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
PPM1F-203ENST00000407142 EPRSP07814 1512 aaKnown RBP18.34■□□□□ 0.53
PPM1F-203ENST00000407142 IQGAP2Q13576 1575 aa18.33■□□□□ 0.53
PPM1F-203ENST00000407142 SUPT6HQ7KZ85 1726 aaKnown RBP18.33■□□□□ 0.53
PPM1F-203ENST00000407142 ERC1Q8IUD2 1116 aa18.33■□□□□ 0.52
PPM1F-203ENST00000407142 SLC3A2P08195 630 aaKnown RBP18.33■□□□□ 0.52
PPM1F-203ENST00000407142 SULT6B1Q6IMI4 303 aa18.33■□□□□ 0.52
PPM1F-203ENST00000407142 ABCA10Q8WWZ4 1543 aa18.32■□□□□ 0.52
PPM1F-203ENST00000407142 TRAK2O60296 914 aa18.32■□□□□ 0.52
PPM1F-203ENST00000407142 BRMS1Q9HCU9 246 aa18.32■□□□□ 0.52
PPM1F-203ENST00000407142 CNTROBQ8N137 903 aa18.32■□□□□ 0.52
PPM1F-203ENST00000407142 NAT10Q9H0A0 1025 aaKnown RBP18.32■□□□□ 0.52
PPM1F-203ENST00000407142 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
PPM1F-203ENST00000407142 CNNM1Q9NRU3 951 aa18.31■□□□□ 0.52
PPM1F-203ENST00000407142 KCNH5Q8NCM2 988 aa18.31■□□□□ 0.52
PPM1F-203ENST00000407142 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
PPM1F-203ENST00000407142 LNPKQ9C0E8 428 aa18.31■□□□□ 0.52
PPM1F-203ENST00000407142 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
PPM1F-203ENST00000407142 SART3Q15020 963 aaKnown RBP18.31■□□□□ 0.52
PPM1F-203ENST00000407142 FSD1Q9BTV5 496 aa18.31■□□□□ 0.52
PPM1F-203ENST00000407142 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
PPM1F-203ENST00000407142 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
PPM1F-203ENST00000407142 RNF214Q8ND24 703 aa18.31■□□□□ 0.52
PPM1F-203ENST00000407142 XBP1P17861 261 aa18.3■□□□□ 0.52
PPM1F-203ENST00000407142 NAP1L1P55209 391 aaKnown RBP18.3■□□□□ 0.52
PPM1F-203ENST00000407142 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
PPM1F-203ENST00000407142 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
PPM1F-203ENST00000407142 BCL11BQ9C0K0 894 aaPredicted RBP18.3■□□□□ 0.52
PPM1F-203ENST00000407142 CDC45O75419 566 aa18.3■□□□□ 0.52
PPM1F-203ENST00000407142 IKQ13123 557 aaPredicted RBP18.3■□□□□ 0.52
PPM1F-203ENST00000407142 ERCC4Q92889 916 aaPredicted RBP18.3■□□□□ 0.52
PPM1F-203ENST00000407142 BRPF3Q9ULD4 1205 aa18.3■□□□□ 0.52
PPM1F-203ENST00000407142 LETM1O95202 739 aaPredicted RBP18.29■□□□□ 0.52
PPM1F-203ENST00000407142 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
PPM1F-203ENST00000407142 HIP1O00291 1037 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 PKNOX2Q96KN3 472 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 H0YHG0 523 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 PSMA5P28066 241 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 FOSBP53539 338 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 ADGRL1O94910 1474 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
PPM1F-203ENST00000407142 CCAR1Q8IX12 1150 aaKnown RBP18.27■□□□□ 0.52
PPM1F-203ENST00000407142 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
PPM1F-203ENST00000407142 TTC39AQ5SRH9 613 aa18.27■□□□□ 0.51
PPM1F-203ENST00000407142 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.51
PPM1F-203ENST00000407142 MBD3O95983 291 aa18.26■□□□□ 0.51
PPM1F-203ENST00000407142 DCTN1Q14203 1278 aa18.26■□□□□ 0.51
PPM1F-203ENST00000407142 TIAM1Q13009 1591 aa18.26■□□□□ 0.51
PPM1F-203ENST00000407142 HMGN5P82970 282 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms