RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
ITSN2-203ENST00000406921 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
ITSN2-203ENST00000406921 NOS1P29475 1434 aa18.28■□□□□ 0.52
ITSN2-203ENST00000406921 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
ITSN2-203ENST00000406921 WWC1Q8IX03 1113 aa18.28■□□□□ 0.52
ITSN2-203ENST00000406921 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
ITSN2-203ENST00000406921 WASHC4Q2M389 1173 aa18.28■□□□□ 0.52
ITSN2-203ENST00000406921 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
ITSN2-203ENST00000406921 PDZRN3Q9UPQ7 1066 aa18.28■□□□□ 0.52
ITSN2-203ENST00000406921 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
ITSN2-203ENST00000406921 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.52
ITSN2-203ENST00000406921 FCHSD2O94868 740 aa18.27■□□□□ 0.51
ITSN2-203ENST00000406921 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.51
ITSN2-203ENST00000406921 SMG6Q86US8 1419 aaKnown RBP18.27■□□□□ 0.51
ITSN2-203ENST00000406921 SIL1Q9H173 461 aa18.26■□□□□ 0.51
ITSN2-203ENST00000406921 KIF3AQ9Y496 699 aa18.26■□□□□ 0.51
ITSN2-203ENST00000406921 WASLO00401 505 aaPredicted RBP18.26■□□□□ 0.51
ITSN2-203ENST00000406921 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
ITSN2-203ENST00000406921 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
ITSN2-203ENST00000406921 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
ITSN2-203ENST00000406921 ATF7IPQ6VMQ6 1270 aa18.25■□□□□ 0.51
ITSN2-203ENST00000406921 PHF8Q9UPP1 1060 aa18.25■□□□□ 0.51
ITSN2-203ENST00000406921 FYB1O15117 783 aa18.25■□□□□ 0.51
ITSN2-203ENST00000406921 C22orf23Q9BZE7 217 aa18.25■□□□□ 0.51
ITSN2-203ENST00000406921 MARCH6O60337 910 aa18.25■□□□□ 0.51
ITSN2-203ENST00000406921 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
ITSN2-203ENST00000406921 ERC2O15083 957 aa18.25■□□□□ 0.51
ITSN2-203ENST00000406921 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
ITSN2-203ENST00000406921 MAP3K1Q13233 1512 aa18.24■□□□□ 0.51
ITSN2-203ENST00000406921 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.24■□□□□ 0.51
ITSN2-203ENST00000406921 GOLGA6L3A6NEY3 463 aa18.24■□□□□ 0.51
ITSN2-203ENST00000406921 PDE3AQ14432 1141 aa18.24■□□□□ 0.51
ITSN2-203ENST00000406921 FOSBP53539 338 aa18.24■□□□□ 0.51
ITSN2-203ENST00000406921 ASXL2Q76L83 1435 aa18.24■□□□□ 0.51
ITSN2-203ENST00000406921 AKAP17AQ02040 695 aaKnown RBP18.23■□□□□ 0.51
ITSN2-203ENST00000406921 NFE2L2Q16236 605 aa18.23■□□□□ 0.51
ITSN2-203ENST00000406921 CPLX1O14810 134 aa18.23■□□□□ 0.51
ITSN2-203ENST00000406921 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
ITSN2-203ENST00000406921 SYNE3Q6ZMZ3 975 aa18.23■□□□□ 0.51
ITSN2-203ENST00000406921 NOL10Q9BSC4 688 aaKnown RBP18.23■□□□□ 0.51
ITSN2-203ENST00000406921 SPG7Q9UQ90 795 aa18.23■□□□□ 0.51
ITSN2-203ENST00000406921 ADAMTS2O95450 1211 aa18.22■□□□□ 0.51
ITSN2-203ENST00000406921 TRDNQ13061 729 aa18.22■□□□□ 0.51
ITSN2-203ENST00000406921 CCDC27Q2M243 656 aa18.22■□□□□ 0.51
ITSN2-203ENST00000406921 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
ITSN2-203ENST00000406921 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
ITSN2-203ENST00000406921 GNAI2P04899 355 aa18.22■□□□□ 0.51
ITSN2-203ENST00000406921 FSD1Q9BTV5 496 aa18.22■□□□□ 0.51
ITSN2-203ENST00000406921 C14orf93Q9H972 538 aaKnown RBP18.22■□□□□ 0.51
ITSN2-203ENST00000406921 BTBD11A6QL63 1104 aa18.22■□□□□ 0.51
ITSN2-203ENST00000406921 VPS37CA5D8V6 355 aaPredicted RBP18.21■□□□□ 0.51
ITSN2-203ENST00000406921 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
ITSN2-203ENST00000406921 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
ITSN2-203ENST00000406921 CPLX2Q6PUV4 134 aaKnown RBP18.21■□□□□ 0.51
ITSN2-203ENST00000406921 DHX16O60231 1041 aaKnown RBP18.2■□□□□ 0.5
ITSN2-203ENST00000406921 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
ITSN2-203ENST00000406921 PTMSP20962 102 aa18.2■□□□□ 0.5
ITSN2-203ENST00000406921 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
ITSN2-203ENST00000406921 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
ITSN2-203ENST00000406921 SLFN5Q08AF3 891 aa18.19■□□□□ 0.5
ITSN2-203ENST00000406921 CHAF1AQ13111 956 aaPredicted RBP18.19■□□□□ 0.5
ITSN2-203ENST00000406921 KIF6Q6ZMV9 814 aa18.19■□□□□ 0.5
ITSN2-203ENST00000406921 CCDC34Q96HJ3 373 aa18.18■□□□□ 0.5
ITSN2-203ENST00000406921 CDC45O75419 566 aa18.18■□□□□ 0.5
ITSN2-203ENST00000406921 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
ITSN2-203ENST00000406921 KDM4AO75164 1064 aa18.18■□□□□ 0.5
ITSN2-203ENST00000406921 CSPP1Q1MSJ5 1256 aa18.18■□□□□ 0.5
ITSN2-203ENST00000406921 SKAP1Q86WV1 359 aa18.18■□□□□ 0.5
ITSN2-203ENST00000406921 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
ITSN2-203ENST00000406921 DISP3Q9P2K9 1392 aa18.17■□□□□ 0.5
ITSN2-203ENST00000406921 KIAA2012Q0VF49 1180 aa18.17■□□□□ 0.5
ITSN2-203ENST00000406921 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
ITSN2-203ENST00000406921 PLCH2O75038 1416 aa18.17■□□□□ 0.5
ITSN2-203ENST00000406921 TRAPPC8Q9Y2L5 1435 aa18.17■□□□□ 0.5
ITSN2-203ENST00000406921 GNAT3A8MTJ3 354 aa18.17■□□□□ 0.5
ITSN2-203ENST00000406921 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
ITSN2-203ENST00000406921 MVPQ14764 893 aaKnown RBP18.17■□□□□ 0.5
ITSN2-203ENST00000406921 C20orf194Q5TEA3 1177 aa18.16■□□□□ 0.5
ITSN2-203ENST00000406921 SRGAP3O43295 1099 aa18.16■□□□□ 0.5
ITSN2-203ENST00000406921 MAP4K4O95819 1239 aaPredicted RBP18.16■□□□□ 0.5
ITSN2-203ENST00000406921 AAMPQ13685 434 aa18.16■□□□□ 0.5
ITSN2-203ENST00000406921 DUSP27Q5VZP5 1158 aa18.16■□□□□ 0.5
ITSN2-203ENST00000406921 AMOTL1Q8IY63 956 aa18.16■□□□□ 0.5
ITSN2-203ENST00000406921 TMEM57Q8N5G2 664 aa18.16■□□□□ 0.5
ITSN2-203ENST00000406921 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
ITSN2-203ENST00000406921 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
ITSN2-203ENST00000406921 TRIM34Q9BYJ4 488 aa18.15■□□□□ 0.5
ITSN2-203ENST00000406921 CNNM1Q9NRU3 951 aa18.15■□□□□ 0.5
ITSN2-203ENST00000406921 RALYLQ86SE5 291 aaKnown RBP18.15■□□□□ 0.5
ITSN2-203ENST00000406921 KDM5BQ9UGL1 1544 aa18.15■□□□□ 0.5
ITSN2-203ENST00000406921 CHRNA2Q15822 529 aa18.14■□□□□ 0.49
ITSN2-203ENST00000406921 CCT4P50991 539 aaKnown RBP18.14■□□□□ 0.49
ITSN2-203ENST00000406921 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
ITSN2-203ENST00000406921 ACEP12821 1306 aa18.14■□□□□ 0.49
ITSN2-203ENST00000406921 DDX11L8A8MPP1 907 aa18.13■□□□□ 0.49
ITSN2-203ENST00000406921 PES1O00541 588 aaKnown RBP18.13■□□□□ 0.49
ITSN2-203ENST00000406921 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
ITSN2-203ENST00000406921 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
ITSN2-203ENST00000406921 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
ITSN2-203ENST00000406921 NEK4P51957 841 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms