RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ZNF396Q96N95 335 aaPredicted RBP14.37□□□□□ -0.11
SMCR8-201ENST00000406438 TRIM5Q9C035 493 aa14.37□□□□□ -0.11
SMCR8-201ENST00000406438 ZNHIT6Q9NWK9 470 aaKnown RBP14.37□□□□□ -0.11
SMCR8-201ENST00000406438 PIP4K2AP48426 406 aaPredicted RBP14.37□□□□□ -0.11
SMCR8-201ENST00000406438 NLRP2Q9NX02 1062 aa14.36□□□□□ -0.11
SMCR8-201ENST00000406438 GPRASP1Q5JY77 1395 aa14.36□□□□□ -0.11
SMCR8-201ENST00000406438 STIM1Q13586 685 aa14.36□□□□□ -0.11
SMCR8-201ENST00000406438 ERC1Q8IUD2 1116 aa14.36□□□□□ -0.11
SMCR8-201ENST00000406438 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMCR8-201ENST00000406438 MYOM3Q5VTT5 1437 aa14.36□□□□□ -0.11
SMCR8-201ENST00000406438 TXLNBQ8N3L3 684 aa14.36□□□□□ -0.11
SMCR8-201ENST00000406438 BRPF1P55201 1214 aaPredicted RBP14.35□□□□□ -0.11
SMCR8-201ENST00000406438 CYB5RLQ6IPT4 315 aa14.35□□□□□ -0.11
SMCR8-201ENST00000406438 SKIDA1Q1XH10 827 aa14.35□□□□□ -0.11
SMCR8-201ENST00000406438 BCL11BQ9C0K0 894 aaPredicted RBP14.35□□□□□ -0.11
SMCR8-201ENST00000406438 JMYQ8N9B5 988 aa14.34□□□□□ -0.11
SMCR8-201ENST00000406438 ABTB2Q8N961 1025 aa14.34□□□□□ -0.11
SMCR8-201ENST00000406438 CNTLNQ9NXG0 1405 aa14.34□□□□□ -0.11
SMCR8-201ENST00000406438 FYCO1Q9BQS8 1478 aa14.34□□□□□ -0.11
SMCR8-201ENST00000406438 TTC39AQ5SRH9 613 aa14.34□□□□□ -0.11
SMCR8-201ENST00000406438 ATP2B2Q01814 1243 aa14.34□□□□□ -0.11
SMCR8-201ENST00000406438 CNNM1Q9NRU3 951 aa14.34□□□□□ -0.11
SMCR8-201ENST00000406438 DHX8Q14562 1220 aaKnown RBP14.34□□□□□ -0.11
SMCR8-201ENST00000406438 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.11
SMCR8-201ENST00000406438 KDM4AO75164 1064 aa14.33□□□□□ -0.12
SMCR8-201ENST00000406438 GNAI3P08754 354 aa14.33□□□□□ -0.12
SMCR8-201ENST00000406438 SF3B2Q13435 895 aaKnown RBP14.33□□□□□ -0.12
SMCR8-201ENST00000406438 PPP1R1BQ9UD71 204 aaPredicted RBP14.33□□□□□ -0.12
SMCR8-201ENST00000406438 CCDC158Q5M9N0 1113 aa14.33□□□□□ -0.12
SMCR8-201ENST00000406438 DNAJC2Q99543 621 aaKnown RBP14.33□□□□□ -0.12
SMCR8-201ENST00000406438 LEKR1Q6ZMV7 388 aa14.33□□□□□ -0.12
SMCR8-201ENST00000406438 GAS2L2Q8NHY3 880 aa14.33□□□□□ -0.12
SMCR8-201ENST00000406438 MBD3O95983 291 aa14.32□□□□□ -0.12
SMCR8-201ENST00000406438 STAC3Q96MF2 364 aa14.32□□□□□ -0.12
SMCR8-201ENST00000406438 FANCIQ9NVI1 1328 aa14.32□□□□□ -0.12
SMCR8-201ENST00000406438 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
SMCR8-201ENST00000406438 ANKRD1Q15327 319 aa14.32□□□□□ -0.12
SMCR8-201ENST00000406438 KIF21BO75037 1637 aa14.32□□□□□ -0.12
SMCR8-201ENST00000406438 AXDND1Q5T1B0 1012 aaPredicted RBP14.32□□□□□ -0.12
SMCR8-201ENST00000406438 DESP17661 470 aa14.31□□□□□ -0.12
SMCR8-201ENST00000406438 NUTM2GQ5VZR2 741 aa14.31□□□□□ -0.12
SMCR8-201ENST00000406438 DACH1Q9UI36 760 aa14.31□□□□□ -0.12
SMCR8-201ENST00000406438 TSPY26PQ9H489 355 aa14.31□□□□□ -0.12
SMCR8-201ENST00000406438 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
SMCR8-201ENST00000406438 DEF6Q9H4E7 631 aa14.31□□□□□ -0.12
SMCR8-201ENST00000406438 CT47B1P0C2W7 299 aaPredicted RBP14.31□□□□□ -0.12
SMCR8-201ENST00000406438 ENOX2Q16206 610 aaKnown RBP14.31□□□□□ -0.12
SMCR8-201ENST00000406438 TRIM22Q8IYM9 498 aa14.31□□□□□ -0.12
SMCR8-201ENST00000406438 GBP2P32456 591 aaPredicted RBP14.3□□□□□ -0.12
SMCR8-201ENST00000406438 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
SMCR8-201ENST00000406438 SURF6O75683 361 aaKnown RBP14.3□□□□□ -0.12
SMCR8-201ENST00000406438 GNAI2P04899 355 aa14.3□□□□□ -0.12
SMCR8-201ENST00000406438 MRE11P49959 708 aa14.3□□□□□ -0.12
SMCR8-201ENST00000406438 CAVIN1Q6NZI2 390 aaKnown RBP14.3□□□□□ -0.12
SMCR8-201ENST00000406438 PANK1Q8TE04 598 aa14.3□□□□□ -0.12
SMCR8-201ENST00000406438 TRIM21P19474 475 aaKnown RBP14.3□□□□□ -0.12
SMCR8-201ENST00000406438 PDCL3Q9H2J4 239 aa14.3□□□□□ -0.12
SMCR8-201ENST00000406438 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
SMCR8-201ENST00000406438 CCDC66A2RUB6 948 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 ATP2B1P20020 1258 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 NLRP6P59044 892 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 FMNL2Q96PY5 1086 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 NACAP1Q9BZK3 213 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 ANKRD62A6NC57 917 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 SERPINC1P01008 464 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 PPFIBP1Q86W92 1011 aa14.29□□□□□ -0.12
SMCR8-201ENST00000406438 FAM177BA6PVY3 158 aa14.28□□□□□ -0.12
SMCR8-201ENST00000406438 CCDC181Q5TID7 509 aa14.28□□□□□ -0.12
SMCR8-201ENST00000406438 TSPYL1Q9H0U9 437 aa14.28□□□□□ -0.12
SMCR8-201ENST00000406438 GOLGA6L7A0A1B0GV03 622 aa14.28□□□□□ -0.12
SMCR8-201ENST00000406438 STK38Q15208 465 aa14.28□□□□□ -0.12
SMCR8-201ENST00000406438 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
SMCR8-201ENST00000406438 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.12
SMCR8-201ENST00000406438 CEBPZQ03701 1054 aaKnown RBP14.27□□□□□ -0.12
SMCR8-201ENST00000406438 RNF214Q8ND24 703 aa14.27□□□□□ -0.12
SMCR8-201ENST00000406438 IQCEQ6IPM2 695 aa14.27□□□□□ -0.12
SMCR8-201ENST00000406438 NEK4P51957 841 aa14.27□□□□□ -0.13
SMCR8-201ENST00000406438 ZHX3Q9H4I2 956 aa14.27□□□□□ -0.13
SMCR8-201ENST00000406438 CABP2Q9NPB3 220 aa14.27□□□□□ -0.13
SMCR8-201ENST00000406438 FAM69CQ0P6D2 419 aa14.26□□□□□ -0.13
SMCR8-201ENST00000406438 RABEP1Q15276 862 aa14.26□□□□□ -0.13
SMCR8-201ENST00000406438 EZRP15311 586 aaKnown RBP14.26□□□□□ -0.13
SMCR8-201ENST00000406438 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
SMCR8-201ENST00000406438 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMCR8-201ENST00000406438 RBM5P52756 815 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMCR8-201ENST00000406438 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
SMCR8-201ENST00000406438 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
SMCR8-201ENST00000406438 KIAA0754O94854 1291 aa14.25□□□□□ -0.13
SMCR8-201ENST00000406438 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
SMCR8-201ENST00000406438 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
SMCR8-201ENST00000406438 TRAK2O60296 914 aa14.25□□□□□ -0.13
SMCR8-201ENST00000406438 ESCO1Q5FWF5 840 aa14.25□□□□□ -0.13
SMCR8-201ENST00000406438 MPHOSPH8Q99549 860 aa14.25□□□□□ -0.13
SMCR8-201ENST00000406438 BRD4O60885 1362 aaPredicted RBP14.25□□□□□ -0.13
SMCR8-201ENST00000406438 CYP46A1Q9Y6A2 500 aa14.25□□□□□ -0.13
SMCR8-201ENST00000406438 SPC24Q8NBT2 197 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 CDKL5O76039 1030 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 ME1P48163 572 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 CCDC97Q96F63 343 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms