RNA–Protein interactions for RNA: ENST00000405576.5

NR1H3-202, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-202ENST00000405576 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
NR1H3-202ENST00000405576 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.39
NR1H3-202ENST00000405576 PIP4K2BP78356 416 aa23.7■■□□□ 1.38
NR1H3-202ENST00000405576 ACEP12821 1306 aa23.68■■□□□ 1.38
NR1H3-202ENST00000405576 SCAF1Q9H7N4 1312 aaKnown RBP23.68■■□□□ 1.38
NR1H3-202ENST00000405576 XIRP1Q702N8 1843 aaKnown RBP23.68■■□□□ 1.38
NR1H3-202ENST00000405576 TNNT2P45379 298 aaPredicted RBP23.67■■□□□ 1.38
NR1H3-202ENST00000405576 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.67■■□□□ 1.38
NR1H3-202ENST00000405576 USP6P35125 1406 aa23.67■■□□□ 1.38
NR1H3-202ENST00000405576 MSH6P52701 1360 aa23.66■■□□□ 1.38
NR1H3-202ENST00000405576 RGPD8O14715 1765 aaPredicted RBP23.66■■□□□ 1.38
NR1H3-202ENST00000405576 NUTM2FA1L443 756 aa23.65■■□□□ 1.38
NR1H3-202ENST00000405576 MTHFSP49914 203 aa23.64■■□□□ 1.37
NR1H3-202ENST00000405576 SHPRHQ149N8 1683 aa23.63■■□□□ 1.37
NR1H3-202ENST00000405576 TTC21AQ8NDW8 1320 aa23.63■■□□□ 1.37
NR1H3-202ENST00000405576 C14orf37Q86TY3 774 aa23.63■■□□□ 1.37
NR1H3-202ENST00000405576 C19orf44Q9H6X5 657 aa23.63■■□□□ 1.37
NR1H3-202ENST00000405576 ADAMTS8Q9UP79 889 aa23.63■■□□□ 1.37
NR1H3-202ENST00000405576 TTC21BQ7Z4L5 1316 aa23.62■■□□□ 1.37
NR1H3-202ENST00000405576 NGDNQ8NEJ9 315 aaKnown RBP23.62■■□□□ 1.37
NR1H3-202ENST00000405576 COG3Q96JB2 828 aa23.62■■□□□ 1.37
NR1H3-202ENST00000405576 SSH2Q76I76 1423 aa23.6■■□□□ 1.37
NR1H3-202ENST00000405576 NME9Q86XW9 330 aa23.6■■□□□ 1.37
NR1H3-202ENST00000405576 AATKQ6ZMQ8 1374 aa23.59■■□□□ 1.37
NR1H3-202ENST00000405576 GTF3C3Q9Y5Q9 886 aa23.58■■□□□ 1.37
NR1H3-202ENST00000405576 CADPS2Q86UW7 1296 aa23.57■■□□□ 1.36
NR1H3-202ENST00000405576 PMFBP1Q8TBY8 1022 aa23.57■■□□□ 1.36
NR1H3-202ENST00000405576 SLAIN2Q9P270 581 aa23.57■■□□□ 1.36
NR1H3-202ENST00000405576 OVOS2A0A0J9YW53 1432 aa23.56■■□□□ 1.36
NR1H3-202ENST00000405576 DCCP43146 1447 aa23.56■■□□□ 1.36
NR1H3-202ENST00000405576 OVOS2Q6IE36 1432 aa23.56■■□□□ 1.36
NR1H3-202ENST00000405576 SMG6Q86US8 1419 aaKnown RBP23.56■■□□□ 1.36
NR1H3-202ENST00000405576 ATF3P18847 181 aa23.56■■□□□ 1.36
NR1H3-202ENST00000405576 HSPA1LP34931 641 aa23.55■■□□□ 1.36
NR1H3-202ENST00000405576 PHF8Q9UPP1 1060 aa23.55■■□□□ 1.36
NR1H3-202ENST00000405576 NUDCQ9Y266 331 aa23.55■■□□□ 1.36
NR1H3-202ENST00000405576 COL3A1P02461 1466 aaPredicted RBP23.55■■□□□ 1.36
NR1H3-202ENST00000405576 PDE3BQ13370 1112 aa23.54■■□□□ 1.36
NR1H3-202ENST00000405576 NGEFQ8N5V2 710 aa23.54■■□□□ 1.36
NR1H3-202ENST00000405576 PNPLA6Q8IY17 1366 aa23.53■■□□□ 1.36
NR1H3-202ENST00000405576 CDK12Q9NYV4 1490 aaPredicted RBP23.53■■□□□ 1.36
NR1H3-202ENST00000405576 MAP2P11137 1827 aaKnown RBP23.52■■□□□ 1.36
NR1H3-202ENST00000405576 KIF1AQ12756 1690 aa23.52■■□□□ 1.36
NR1H3-202ENST00000405576 USP54Q70EL1 1684 aa23.52■■□□□ 1.36
NR1H3-202ENST00000405576 USP31Q70CQ4 1352 aa23.52■■□□□ 1.36
NR1H3-202ENST00000405576 POLKQ9UBT6 870 aa23.5■■□□□ 1.35
NR1H3-202ENST00000405576 PIK3C2AO00443 1686 aa23.49■■□□□ 1.35
NR1H3-202ENST00000405576 ZRANB1Q9UGI0 708 aa23.49■■□□□ 1.35
NR1H3-202ENST00000405576 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
NR1H3-202ENST00000405576 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
NR1H3-202ENST00000405576 RUNDC1Q96C34 613 aa23.46■■□□□ 1.35
NR1H3-202ENST00000405576 C1orf167Q5SNV9 1468 aa23.45■■□□□ 1.35
NR1H3-202ENST00000405576 PNNQ9H307 717 aaKnown RBP23.45■■□□□ 1.34
NR1H3-202ENST00000405576 U2AF1L5P0DN76 240 aaPredicted RBP23.44■■□□□ 1.34
NR1H3-202ENST00000405576 U2AF1Q01081 240 aaKnown RBP eCLIP23.44■■□□□ 1.34
NR1H3-202ENST00000405576 CCDC146Q8IYE0 955 aa23.44■■□□□ 1.34
NR1H3-202ENST00000405576 ROBO1Q9Y6N7 1651 aa23.43■■□□□ 1.34
NR1H3-202ENST00000405576 NEFLP07196 543 aa23.42■■□□□ 1.34
NR1H3-202ENST00000405576 SALL2Q9Y467 1007 aaPredicted RBP23.42■■□□□ 1.34
NR1H3-202ENST00000405576 MST1RQ04912 1400 aa23.42■■□□□ 1.34
NR1H3-202ENST00000405576 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
NR1H3-202ENST00000405576 PSME1Q06323 249 aa23.41■■□□□ 1.34
NR1H3-202ENST00000405576 NCBP3Q53F19 620 aaKnown RBP23.41■■□□□ 1.34
NR1H3-202ENST00000405576 EMILIN1Q9Y6C2 1016 aa23.41■■□□□ 1.34
NR1H3-202ENST00000405576 APAF1O14727 1248 aa23.4■■□□□ 1.34
NR1H3-202ENST00000405576 U2SURPO15042 1029 aaKnown RBP23.4■■□□□ 1.34
NR1H3-202ENST00000405576 SENP3-EIF4A1A0A087X0R7 540 aa23.4■■□□□ 1.34
NR1H3-202ENST00000405576 PAK3O75914 559 aaPredicted RBP23.39■■□□□ 1.33
NR1H3-202ENST00000405576 NLRP6P59044 892 aa23.39■■□□□ 1.33
NR1H3-202ENST00000405576 MARF1Q9Y4F3 1742 aaKnown RBP23.39■■□□□ 1.33
NR1H3-202ENST00000405576 ZNF521Q96K83 1311 aa23.38■■□□□ 1.33
NR1H3-202ENST00000405576 RRS1Q15050 365 aaKnown RBP23.38■■□□□ 1.33
NR1H3-202ENST00000405576 BRINP3Q76B58 766 aa23.38■■□□□ 1.33
NR1H3-202ENST00000405576 ABTB2Q8N961 1025 aa23.38■■□□□ 1.33
NR1H3-202ENST00000405576 ORAI2Q96SN7 254 aa23.38■■□□□ 1.33
NR1H3-202ENST00000405576 KIF24Q5T7B8 1368 aa23.37■■□□□ 1.33
NR1H3-202ENST00000405576 FBLN1P23142 703 aa23.37■■□□□ 1.33
NR1H3-202ENST00000405576 SBNO1A3KN83 1393 aa23.34■■□□□ 1.33
NR1H3-202ENST00000405576 TRPM3Q9HCF6 1732 aaPredicted RBP23.34■■□□□ 1.33
NR1H3-202ENST00000405576 MAPK8IP3Q9UPT6 1336 aa23.34■■□□□ 1.33
NR1H3-202ENST00000405576 FCHSD2O94868 740 aa23.34■■□□□ 1.33
NR1H3-202ENST00000405576 IL13P35225 146 aa23.34■■□□□ 1.33
NR1H3-202ENST00000405576 GOLGA2Q08379 1002 aa23.34■■□□□ 1.33
NR1H3-202ENST00000405576 FLT4P35916 1363 aa23.34■■□□□ 1.33
NR1H3-202ENST00000405576 NEFMP07197 916 aa23.33■■□□□ 1.33
NR1H3-202ENST00000405576 TCP11L2Q8N4U5 519 aa23.33■■□□□ 1.33
NR1H3-202ENST00000405576 PEAK1Q9H792 1746 aa23.33■■□□□ 1.33
NR1H3-202ENST00000405576 SUPT16HQ9Y5B9 1047 aaKnown RBP23.33■■□□□ 1.33
NR1H3-202ENST00000405576 CCDC27Q2M243 656 aa23.32■■□□□ 1.32
NR1H3-202ENST00000405576 FOXO3O43524 673 aa23.31■■□□□ 1.32
NR1H3-202ENST00000405576 PLEKHF1Q96S99 279 aa23.31■■□□□ 1.32
NR1H3-202ENST00000405576 MAP3K19Q56UN5 1328 aa23.31■■□□□ 1.32
NR1H3-202ENST00000405576 KRT28Q7Z3Y7 464 aa23.3■■□□□ 1.32
NR1H3-202ENST00000405576 KCNH5Q8NCM2 988 aa23.29■■□□□ 1.32
NR1H3-202ENST00000405576 RTL1A6NKG5 1358 aa23.29■■□□□ 1.32
NR1H3-202ENST00000405576 CDCA7LQ96GN5 454 aa23.28■■□□□ 1.32
NR1H3-202ENST00000405576 NPHP3Q7Z494 1330 aa23.28■■□□□ 1.32
NR1H3-202ENST00000405576 PHLPP1O60346 1717 aa23.28■■□□□ 1.32
NR1H3-202ENST00000405576 E9PSI1 815 aa23.27■■□□□ 1.32
NR1H3-202ENST00000405576 AMPHP49418 695 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms