RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 BECN2A8MW95 431 aa8.94□□□□□ -0.98
HDAC9-202ENST00000405010 ERC2O15083 957 aa8.94□□□□□ -0.98
HDAC9-202ENST00000405010 LETM1O95202 739 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-202ENST00000405010 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
HDAC9-202ENST00000405010 SMAP1Q8IYB5 467 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-202ENST00000405010 USP25Q9UHP3 1055 aa8.94□□□□□ -0.98
HDAC9-202ENST00000405010 HMOX1P09601 288 aa8.94□□□□□ -0.98
HDAC9-202ENST00000405010 TMPOP42166 694 aaKnown RBP8.94□□□□□ -0.98
HDAC9-202ENST00000405010 CCDC27Q2M243 656 aa8.94□□□□□ -0.98
HDAC9-202ENST00000405010 DMRT2Q9Y5R5 561 aa8.94□□□□□ -0.98
HDAC9-202ENST00000405010 TERF1P54274 439 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 TAOK2Q9UL54 1235 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 NOL7Q9UMY1 257 aaKnown RBP8.93□□□□□ -0.98
HDAC9-202ENST00000405010 TMEM132EQ6IEE7 984 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 LRSAM1Q6UWE0 723 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 PRIMPOLQ96LW4 560 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 USP19O94966 1318 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 KIF14Q15058 1648 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 NSD3Q9BZ95 1437 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 TRIM5Q9C035 493 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 WDR33Q9C0J8 1336 aaKnown RBP8.93□□□□□ -0.98
HDAC9-202ENST00000405010 ARHGEF12Q9NZN5 1544 aa8.93□□□□□ -0.98
HDAC9-202ENST00000405010 IQGAP2Q13576 1575 aa8.92□□□□□ -0.98
HDAC9-202ENST00000405010 SPDYE4A6NLX3 237 aa8.92□□□□□ -0.98
HDAC9-202ENST00000405010 NUCB1Q02818 461 aa8.92□□□□□ -0.98
HDAC9-202ENST00000405010 TPD52L1Q16890 204 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-202ENST00000405010 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC9-202ENST00000405010 CCDC94Q9BW85 323 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-202ENST00000405010 PRKAR2BP31323 418 aa8.92□□□□□ -0.98
HDAC9-202ENST00000405010 RBM25P49756 843 aaKnown RBP8.92□□□□□ -0.98
HDAC9-202ENST00000405010 GCC2Q8IWJ2 1684 aa8.92□□□□□ -0.98
HDAC9-202ENST00000405010 PTPRGP23470 1445 aa8.92□□□□□ -0.98
HDAC9-202ENST00000405010 TWISTNBQ3B726 338 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-202ENST00000405010 CCDC112Q8NEF3 446 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 BICD2Q8TD16 824 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 RBSNQ9H1K0 784 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 CABP2Q9NPB3 220 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 CGNQ9P2M7 1197 aaKnown RBP8.91□□□□□ -0.98
HDAC9-202ENST00000405010 KDM5BQ9UGL1 1544 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 COL17A1Q9UMD9 1497 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-202ENST00000405010 KDM6BO15054 1643 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 PPP1R9BQ96SB3 815 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 ASXL1Q8IXJ9 1541 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 PIK3C2GO75747 1445 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 MINK1Q8N4C8 1332 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-202ENST00000405010 TAF3Q5VWG9 929 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
HDAC9-202ENST00000405010 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 TEX35Q5T0J7 233 aa8.91□□□□□ -0.98
HDAC9-202ENST00000405010 ZNF830Q96NB3 372 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-202ENST00000405010 GDPD2Q9HCC8 539 aa8.9□□□□□ -0.98
HDAC9-202ENST00000405010 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-202ENST00000405010 CCDC192P0DO97 292 aa8.9□□□□□ -0.98
HDAC9-202ENST00000405010 NOLC1Q14978 699 aaKnown RBP eCLIP8.9□□□□□ -0.98
HDAC9-202ENST00000405010 ZNF428Q96B54 188 aa8.9□□□□□ -0.98
HDAC9-202ENST00000405010 TPM4P67936 248 aa8.9□□□□□ -0.99
HDAC9-202ENST00000405010 CTTNBP2Q8WZ74 1663 aa8.89□□□□□ -0.99
HDAC9-202ENST00000405010 NPHP1O15259 732 aa8.89□□□□□ -0.99
HDAC9-202ENST00000405010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-202ENST00000405010 ADCY5O95622 1261 aa8.89□□□□□ -0.99
HDAC9-202ENST00000405010 ZNF445P59923 1031 aa8.89□□□□□ -0.99
HDAC9-202ENST00000405010 GPATCH8Q9UKJ3 1502 aaKnown RBP8.89□□□□□ -0.99
HDAC9-202ENST00000405010 MAPK8IP2Q13387 824 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-202ENST00000405010 BBXQ8WY36 941 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-202ENST00000405010 UPF3BQ9BZI7 483 aaKnown RBP8.89□□□□□ -0.99
HDAC9-202ENST00000405010 TTC12Q9H892 705 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-202ENST00000405010 HSP90B1P14625 803 aaKnown RBP8.88□□□□□ -0.99
HDAC9-202ENST00000405010 ALDH1L2Q3SY69 923 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 HOMER1Q86YM7 354 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 ZNF521Q96K83 1311 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 KDM5CP41229 1560 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 H3BQV1 296 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 VGFO15240 615 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-202ENST00000405010 ZKSCAN1P17029 563 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-202ENST00000405010 CCDC183Q5T5S1 534 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 IFFO2Q5TF58 517 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 SCAF11Q99590 1463 aaKnown RBP8.88□□□□□ -0.99
HDAC9-202ENST00000405010 ARHGEF11O15085 1522 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 GPS2Q13227 327 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 GPATCH3Q96I76 525 aa8.88□□□□□ -0.99
HDAC9-202ENST00000405010 GTPBP4Q9BZE4 634 aaKnown RBP8.88□□□□□ -0.99
HDAC9-202ENST00000405010 HCLS1P14317 486 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-202ENST00000405010 GNL2Q13823 731 aaKnown RBP8.88□□□□□ -0.99
HDAC9-202ENST00000405010 KIAA0586Q9BVV6 1533 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 ERICH4A6NGS2 130 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 IGSF3O75054 1194 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 RUFY2Q8WXA3 655 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC9-202ENST00000405010 TRMT2AQ8IZ69 625 aaKnown RBP8.87□□□□□ -0.99
HDAC9-202ENST00000405010 THUMPD2Q9BTF0 503 aaKnown RBP8.87□□□□□ -0.99
HDAC9-202ENST00000405010 ZBTB40Q9NUA8 1239 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 ARHGAP5Q13017 1502 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 CCDC141Q6ZP82 1450 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 FAM177BA6PVY3 158 aa8.87□□□□□ -0.99
HDAC9-202ENST00000405010 ZNF500O60304 480 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-202ENST00000405010 CCAR2Q8N163 923 aaKnown RBP8.87□□□□□ -0.99
HDAC9-202ENST00000405010 ZGPATQ8N5A5 531 aaKnown RBP8.87□□□□□ -0.99
HDAC9-202ENST00000405010 ARGLU1Q9NWB6 273 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-202ENST00000405010 DNMT1P26358 1616 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms