RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 QTRT2Q9H974 415 aaKnown RBP23.39■■□□□ 1.33
CGREF1-205ENST00000404694 SBNO2Q9Y2G9 1366 aa23.38■■□□□ 1.33
CGREF1-205ENST00000404694 PLEKHG5O94827 1062 aa23.38■■□□□ 1.33
CGREF1-205ENST00000404694 HAP1P54257 671 aaPredicted RBP23.38■■□□□ 1.33
CGREF1-205ENST00000404694 CDK12Q9NYV4 1490 aaPredicted RBP23.37■■□□□ 1.33
CGREF1-205ENST00000404694 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.37■■□□□ 1.33
CGREF1-205ENST00000404694 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
CGREF1-205ENST00000404694 BCL9LQ86UU0 1499 aa23.36■■□□□ 1.33
CGREF1-205ENST00000404694 SLIT2O94813 1529 aa23.35■■□□□ 1.33
CGREF1-205ENST00000404694 PLCH1Q4KWH8 1693 aa23.35■■□□□ 1.33
CGREF1-205ENST00000404694 ATRNO75882 1429 aa23.35■■□□□ 1.33
CGREF1-205ENST00000404694 RBM6P78332 1123 aaKnown RBP23.34■■□□□ 1.33
CGREF1-205ENST00000404694 TRPC5Q9UL62 973 aaPredicted RBP23.33■■□□□ 1.33
CGREF1-205ENST00000404694 PHRF1Q9P1Y6 1649 aaKnown RBP23.33■■□□□ 1.32
CGREF1-205ENST00000404694 NWD2Q9ULI1 1742 aa23.32■■□□□ 1.32
CGREF1-205ENST00000404694 RGS12O14924 1447 aa23.31■■□□□ 1.32
CGREF1-205ENST00000404694 CABP1Q9NZU7 370 aa23.31■■□□□ 1.32
CGREF1-205ENST00000404694 USP6P35125 1406 aa23.29■■□□□ 1.32
CGREF1-205ENST00000404694 ATAD2Q6PL18 1390 aa23.28■■□□□ 1.32
CGREF1-205ENST00000404694 AKAP12Q02952 1782 aa23.28■■□□□ 1.32
CGREF1-205ENST00000404694 UNC5CLQ8IV45 518 aa23.27■■□□□ 1.32
CGREF1-205ENST00000404694 COL14A1Q05707 1796 aaKnown RBP23.27■■□□□ 1.32
CGREF1-205ENST00000404694 BRD4O60885 1362 aaPredicted RBP23.27■■□□□ 1.32
CGREF1-205ENST00000404694 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
CGREF1-205ENST00000404694 NRAPQ86VF7 1730 aa23.25■■□□□ 1.31
CGREF1-205ENST00000404694 NRKQ7Z2Y5 1582 aa23.25■■□□□ 1.31
CGREF1-205ENST00000404694 FAM83GA6ND36 823 aa23.25■■□□□ 1.31
CGREF1-205ENST00000404694 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
CGREF1-205ENST00000404694 GLI3P10071 1580 aa23.24■■□□□ 1.31
CGREF1-205ENST00000404694 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
CGREF1-205ENST00000404694 PIK3C2AO00443 1686 aa23.22■■□□□ 1.31
CGREF1-205ENST00000404694 ST20-MTHFSA0A0A6YYL1 179 aa23.22■■□□□ 1.31
CGREF1-205ENST00000404694 GJD4Q96KN9 370 aaPredicted RBP23.22■■□□□ 1.31
CGREF1-205ENST00000404694 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
CGREF1-205ENST00000404694 MON2Q7Z3U7 1717 aa23.21■■□□□ 1.31
CGREF1-205ENST00000404694 TESK2Q96S53 571 aa23.21■■□□□ 1.31
CGREF1-205ENST00000404694 USP19O94966 1318 aa23.21■■□□□ 1.31
CGREF1-205ENST00000404694 USP47Q96K76 1375 aa23.21■■□□□ 1.31
CGREF1-205ENST00000404694 KIAA0232Q92628 1395 aa23.2■■□□□ 1.3
CGREF1-205ENST00000404694 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
CGREF1-205ENST00000404694 PRDM11Q9NQV5 511 aa23.19■■□□□ 1.3
CGREF1-205ENST00000404694 VPS72Q15906 364 aa23.18■■□□□ 1.3
CGREF1-205ENST00000404694 NLRP13Q86W25 1043 aa23.18■■□□□ 1.3
CGREF1-205ENST00000404694 BTG4Q9NY30 223 aa23.18■■□□□ 1.3
CGREF1-205ENST00000404694 CD163L1Q9NR16 1453 aa23.17■■□□□ 1.3
CGREF1-205ENST00000404694 KTN1Q86UP2 1357 aaKnown RBP23.16■■□□□ 1.3
CGREF1-205ENST00000404694 SLIT3O75094 1523 aa23.16■■□□□ 1.3
CGREF1-205ENST00000404694 ZC3H6P61129 1189 aaKnown RBP23.15■■□□□ 1.3
CGREF1-205ENST00000404694 PUS7Q96PZ0 661 aaKnown RBP23.15■■□□□ 1.3
CGREF1-205ENST00000404694 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
CGREF1-205ENST00000404694 EP400Q96L91 3159 aa23.14■■□□□ 1.3
CGREF1-205ENST00000404694 CPDO75976 1380 aa23.14■■□□□ 1.29
CGREF1-205ENST00000404694 SLC24A1O60721 1099 aa23.14■■□□□ 1.29
CGREF1-205ENST00000404694 NLRP6P59044 892 aa23.14■■□□□ 1.29
CGREF1-205ENST00000404694 CHRNA2Q15822 529 aa23.14■■□□□ 1.29
CGREF1-205ENST00000404694 CCDC9Q9Y3X0 531 aaKnown RBP23.14■■□□□ 1.29
CGREF1-205ENST00000404694 LMO7Q8WWI1 1683 aa23.13■■□□□ 1.29
CGREF1-205ENST00000404694 TTC21AQ8NDW8 1320 aa23.13■■□□□ 1.29
CGREF1-205ENST00000404694 GCP02774 474 aa23.13■■□□□ 1.29
CGREF1-205ENST00000404694 TMC1Q8TDI8 760 aa23.13■■□□□ 1.29
CGREF1-205ENST00000404694 UPF1Q92900 1129 aaKnown RBP eCLIP23.13■■□□□ 1.29
CGREF1-205ENST00000404694 SLC12A5Q9H2X9 1139 aa23.12■■□□□ 1.29
CGREF1-205ENST00000404694 BRWD3Q6RI45 1802 aa23.1■■□□□ 1.29
CGREF1-205ENST00000404694 A0A1W2PP64 1363 aa23.1■■□□□ 1.29
CGREF1-205ENST00000404694 NINLQ9Y2I6 1382 aa23.1■■□□□ 1.29
CGREF1-205ENST00000404694 USP54Q70EL1 1684 aa23.08■■□□□ 1.29
CGREF1-205ENST00000404694 CAMTA1Q9Y6Y1 1673 aa23.08■■□□□ 1.29
CGREF1-205ENST00000404694 TMF1P82094 1093 aa23.08■■□□□ 1.29
CGREF1-205ENST00000404694 HDGFL2Q7Z4V5 671 aaPredicted RBP23.08■■□□□ 1.29
CGREF1-205ENST00000404694 EDC4Q6P2E9 1401 aaKnown RBP23.07■■□□□ 1.28
CGREF1-205ENST00000404694 TERF2IPQ9NYB0 399 aa23.07■■□□□ 1.28
CGREF1-205ENST00000404694 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
CGREF1-205ENST00000404694 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
CGREF1-205ENST00000404694 ONECUT3O60422 494 aaPredicted RBP23.05■■□□□ 1.28
CGREF1-205ENST00000404694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.05■■□□□ 1.28
CGREF1-205ENST00000404694 SEPT12Q8IYM1 358 aa23.05■■□□□ 1.28
CGREF1-205ENST00000404694 STRN4Q9NRL3 753 aa23.04■■□□□ 1.28
CGREF1-205ENST00000404694 FAM98CQ17RN3 349 aaKnown RBP23.03■■□□□ 1.28
CGREF1-205ENST00000404694 NFAT5O94916 1531 aa23.03■■□□□ 1.28
CGREF1-205ENST00000404694 COL18A1P39060 1754 aa23.03■■□□□ 1.28
CGREF1-205ENST00000404694 USP31Q70CQ4 1352 aa23.03■■□□□ 1.28
CGREF1-205ENST00000404694 THSD7AQ9UPZ6 1657 aa23.02■■□□□ 1.28
CGREF1-205ENST00000404694 COL5A2P05997 1499 aaPredicted RBP23.02■■□□□ 1.28
CGREF1-205ENST00000404694 AATKQ6ZMQ8 1374 aa23.02■■□□□ 1.28
CGREF1-205ENST00000404694 NME9Q86XW9 330 aa23.01■■□□□ 1.27
CGREF1-205ENST00000404694 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
CGREF1-205ENST00000404694 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
CGREF1-205ENST00000404694 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
CGREF1-205ENST00000404694 ZRANB1Q9UGI0 708 aa23.01■■□□□ 1.27
CGREF1-205ENST00000404694 MYOM1P52179 1685 aa23■■□□□ 1.27
CGREF1-205ENST00000404694 ANKRD36BQ8N2N9 1353 aa23■■□□□ 1.27
CGREF1-205ENST00000404694 A0A0G2JS52 829 aa23■■□□□ 1.27
CGREF1-205ENST00000404694 EVA1CP58658 441 aa23■■□□□ 1.27
CGREF1-205ENST00000404694 MYT1Q01538 1121 aa23■■□□□ 1.27
CGREF1-205ENST00000404694 SOX12O15370 315 aa22.99■■□□□ 1.27
CGREF1-205ENST00000404694 CDCA8Q53HL2 280 aa22.99■■□□□ 1.27
CGREF1-205ENST00000404694 LARP1Q6PKG0 1096 aaKnown RBP22.98■■□□□ 1.27
CGREF1-205ENST00000404694 ARHGEF25Q86VW2 580 aa22.98■■□□□ 1.27
CGREF1-205ENST00000404694 OVOS2A0A0J9YW53 1432 aa22.97■■□□□ 1.27
CGREF1-205ENST00000404694 OVOS2Q6IE36 1432 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms