RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CDK19Q9BWU1 502 aa22.18■■□□□ 1.14
TPM1-207ENST00000403994 POLR3AO14802 1390 aaPredicted RBP22.17■■□□□ 1.14
TPM1-207ENST00000403994 ATAD2Q6PL18 1390 aa22.17■■□□□ 1.14
TPM1-207ENST00000403994 BRWD3Q6RI45 1802 aa22.15■■□□□ 1.14
TPM1-207ENST00000403994 GJD4Q96KN9 370 aaPredicted RBP22.15■■□□□ 1.14
TPM1-207ENST00000403994 NEUROD1Q13562 356 aa22.13■■□□□ 1.13
TPM1-207ENST00000403994 NRKQ7Z2Y5 1582 aa22.12■■□□□ 1.13
TPM1-207ENST00000403994 PPIP5K1Q6PFW1 1433 aa22.12■■□□□ 1.13
TPM1-207ENST00000403994 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
TPM1-207ENST00000403994 PAK3O75914 559 aaPredicted RBP22.11■■□□□ 1.13
TPM1-207ENST00000403994 CCDC61Q9Y6R9 512 aa22.11■■□□□ 1.13
TPM1-207ENST00000403994 ACEP12821 1306 aa22.1■■□□□ 1.13
TPM1-207ENST00000403994 FAM83GA6ND36 823 aa22.09■■□□□ 1.13
TPM1-207ENST00000403994 VPS72Q15906 364 aa22.09■■□□□ 1.13
TPM1-207ENST00000403994 PLEKHG3A1L390 1219 aa22.08■■□□□ 1.13
TPM1-207ENST00000403994 SRPK2P78362 688 aaKnown RBP22.08■■□□□ 1.13
TPM1-207ENST00000403994 NBPF8Q3BBV2 869 aa22.05■■□□□ 1.12
TPM1-207ENST00000403994 CABP2Q9NPB3 220 aa22.05■■□□□ 1.12
TPM1-207ENST00000403994 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
TPM1-207ENST00000403994 AKAP12Q02952 1782 aa22.04■■□□□ 1.12
TPM1-207ENST00000403994 KIAA0232Q92628 1395 aa22.03■■□□□ 1.12
TPM1-207ENST00000403994 THSD7AQ9UPZ6 1657 aa22.03■■□□□ 1.12
TPM1-207ENST00000403994 PIK3C2AO00443 1686 aa22.02■■□□□ 1.12
TPM1-207ENST00000403994 LMO7Q8WWI1 1683 aa22.02■■□□□ 1.12
TPM1-207ENST00000403994 PRDM11Q9NQV5 511 aa22.02■■□□□ 1.12
TPM1-207ENST00000403994 CCDC9Q9Y3X0 531 aaKnown RBP22.02■■□□□ 1.12
TPM1-207ENST00000403994 USP6P35125 1406 aa22.02■■□□□ 1.12
TPM1-207ENST00000403994 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
TPM1-207ENST00000403994 NUTM2GQ5VZR2 741 aa22.01■■□□□ 1.11
TPM1-207ENST00000403994 USP19O94966 1318 aa22.01■■□□□ 1.11
TPM1-207ENST00000403994 TONSLQ96HA7 1378 aa22■■□□□ 1.11
TPM1-207ENST00000403994 SEPT12Q8IYM1 358 aa22■■□□□ 1.11
TPM1-207ENST00000403994 EVC2Q86UK5 1308 aa22■■□□□ 1.11
TPM1-207ENST00000403994 BRD4O60885 1362 aaPredicted RBP21.99■■□□□ 1.11
TPM1-207ENST00000403994 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
TPM1-207ENST00000403994 SBNO2Q9Y2G9 1366 aa21.99■■□□□ 1.11
TPM1-207ENST00000403994 SLIT3O75094 1523 aa21.97■■□□□ 1.11
TPM1-207ENST00000403994 ONECUT3O60422 494 aaPredicted RBP21.97■■□□□ 1.11
TPM1-207ENST00000403994 MON2Q7Z3U7 1717 aa21.97■■□□□ 1.11
TPM1-207ENST00000403994 ABTB2Q8N961 1025 aa21.96■■□□□ 1.11
TPM1-207ENST00000403994 CABP1Q9NZU7 370 aa21.96■■□□□ 1.11
TPM1-207ENST00000403994 CPDO75976 1380 aa21.96■■□□□ 1.11
TPM1-207ENST00000403994 BLMP54132 1417 aaPredicted RBP21.96■■□□□ 1.11
TPM1-207ENST00000403994 SSH2Q76I76 1423 aa21.96■■□□□ 1.11
TPM1-207ENST00000403994 CHRNA2Q15822 529 aa21.95■■□□□ 1.1
TPM1-207ENST00000403994 SPATA31A5Q5VU36 1347 aa21.95■■□□□ 1.1
TPM1-207ENST00000403994 SPATA31A7Q8IWB4 1347 aa21.95■■□□□ 1.1
TPM1-207ENST00000403994 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
TPM1-207ENST00000403994 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
TPM1-207ENST00000403994 CAMTA1Q9Y6Y1 1673 aa21.94■■□□□ 1.1
TPM1-207ENST00000403994 A0A0G2JS52 829 aa21.92■■□□□ 1.1
TPM1-207ENST00000403994 MYT1Q01538 1121 aa21.92■■□□□ 1.1
TPM1-207ENST00000403994 KRT27Q7Z3Y8 459 aa21.92■■□□□ 1.1
TPM1-207ENST00000403994 CCDC125Q86Z20 511 aa21.92■■□□□ 1.1
TPM1-207ENST00000403994 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
TPM1-207ENST00000403994 NLRP13Q86W25 1043 aa21.9■■□□□ 1.1
TPM1-207ENST00000403994 CPSF1Q10570 1443 aaKnown RBP21.89■■□□□ 1.1
TPM1-207ENST00000403994 RGPD1P0DJD0 1748 aa21.89■■□□□ 1.1
TPM1-207ENST00000403994 USP54Q70EL1 1684 aa21.89■■□□□ 1.1
TPM1-207ENST00000403994 SPATA31A1Q5TZJ5 1347 aa21.89■■□□□ 1.1
TPM1-207ENST00000403994 COL5A2P05997 1499 aaPredicted RBP21.89■■□□□ 1.09
TPM1-207ENST00000403994 STRN4Q9NRL3 753 aa21.88■■□□□ 1.09
TPM1-207ENST00000403994 TNS1Q9HBL0 1735 aaKnown RBP21.88■■□□□ 1.09
TPM1-207ENST00000403994 COL18A1P39060 1754 aa21.87■■□□□ 1.09
TPM1-207ENST00000403994 GCP02774 474 aa21.87■■□□□ 1.09
TPM1-207ENST00000403994 CD163L1Q9NR16 1453 aa21.86■■□□□ 1.09
TPM1-207ENST00000403994 WNK3Q9BYP7 1800 aa21.85■■□□□ 1.09
TPM1-207ENST00000403994 NFAT5O94916 1531 aa21.85■■□□□ 1.09
TPM1-207ENST00000403994 PARP4Q9UKK3 1724 aaKnown RBP21.84■■□□□ 1.09
TPM1-207ENST00000403994 NLRP6P59044 892 aa21.84■■□□□ 1.09
TPM1-207ENST00000403994 TTC21BQ7Z4L5 1316 aa21.83■■□□□ 1.09
TPM1-207ENST00000403994 KTN1Q86UP2 1357 aaKnown RBP21.83■■□□□ 1.08
TPM1-207ENST00000403994 TTC21AQ8NDW8 1320 aa21.82■■□□□ 1.08
TPM1-207ENST00000403994 AATKQ6ZMQ8 1374 aa21.82■■□□□ 1.08
TPM1-207ENST00000403994 RGPD5Q99666 1765 aa21.82■■□□□ 1.08
TPM1-207ENST00000403994 LARP1Q6PKG0 1096 aaKnown RBP21.81■■□□□ 1.08
TPM1-207ENST00000403994 ZNF692Q9BU19 519 aaPredicted RBP21.81■■□□□ 1.08
TPM1-207ENST00000403994 DEFB132Q7Z7B7 95 aa21.8■■□□□ 1.08
TPM1-207ENST00000403994 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
TPM1-207ENST00000403994 ABCC6O95255 1503 aa21.8■■□□□ 1.08
TPM1-207ENST00000403994 EVA1CP58658 441 aa21.79■■□□□ 1.08
TPM1-207ENST00000403994 SF3B2Q13435 895 aaKnown RBP21.79■■□□□ 1.08
TPM1-207ENST00000403994 USP35Q9P2H5 1018 aa21.79■■□□□ 1.08
TPM1-207ENST00000403994 CRB1P82279 1406 aa21.79■■□□□ 1.08
TPM1-207ENST00000403994 FAM182BQ5T319 152 aa21.78■■□□□ 1.08
TPM1-207ENST00000403994 BARGINQ6ZT62 677 aa21.78■■□□□ 1.08
TPM1-207ENST00000403994 LTN1O94822 1766 aa21.77■■□□□ 1.08
TPM1-207ENST00000403994 ZBTB7CA1YPR0 619 aa21.77■■□□□ 1.08
TPM1-207ENST00000403994 TCP11L2Q8N4U5 519 aa21.76■■□□□ 1.07
TPM1-207ENST00000403994 ZRANB1Q9UGI0 708 aa21.76■■□□□ 1.07
TPM1-207ENST00000403994 A0A1W2PP64 1363 aa21.75■■□□□ 1.07
TPM1-207ENST00000403994 DISP2A7MBM2 1401 aa21.75■■□□□ 1.07
TPM1-207ENST00000403994 EDC4Q6P2E9 1401 aaKnown RBP21.75■■□□□ 1.07
TPM1-207ENST00000403994 TESK2Q96S53 571 aa21.74■■□□□ 1.07
TPM1-207ENST00000403994 USP31Q70CQ4 1352 aa21.74■■□□□ 1.07
TPM1-207ENST00000403994 PEAK1Q9H792 1746 aa21.73■■□□□ 1.07
TPM1-207ENST00000403994 THRAP3Q9Y2W1 955 aaKnown RBP21.73■■□□□ 1.07
TPM1-207ENST00000403994 ST20-MTHFSA0A0A6YYL1 179 aa21.72■■□□□ 1.07
TPM1-207ENST00000403994 BAG6P46379 1132 aa21.72■■□□□ 1.07
TPM1-207ENST00000403994 ARHGEF25Q86VW2 580 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms