RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 ASXL1Q8IXJ9 1541 aa16.98■□□□□ 0.31
HMGA2-204ENST00000403681 MAGI1Q96QZ7 1491 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-204ENST00000403681 RAB3GAP1Q15042 981 aa16.98■□□□□ 0.31
HMGA2-204ENST00000403681 FSD2A1L4K1 749 aa16.97■□□□□ 0.31
HMGA2-204ENST00000403681 TBC1D9Q6ZT07 1266 aa16.97■□□□□ 0.31
HMGA2-204ENST00000403681 PIK3C2GO75747 1445 aa16.97■□□□□ 0.31
HMGA2-204ENST00000403681 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
HMGA2-204ENST00000403681 PRKAR2BP31323 418 aa16.97■□□□□ 0.31
HMGA2-204ENST00000403681 ANTXR1Q9H6X2 564 aa16.97■□□□□ 0.31
HMGA2-204ENST00000403681 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
HMGA2-204ENST00000403681 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
HMGA2-204ENST00000403681 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
HMGA2-204ENST00000403681 OFD1O75665 1012 aa16.97■□□□□ 0.31
HMGA2-204ENST00000403681 SASS6Q6UVJ0 657 aa16.96■□□□□ 0.31
HMGA2-204ENST00000403681 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
HMGA2-204ENST00000403681 KDM5CP41229 1560 aa16.95■□□□□ 0.3
HMGA2-204ENST00000403681 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
HMGA2-204ENST00000403681 MCM2P49736 904 aa16.95■□□□□ 0.3
HMGA2-204ENST00000403681 CHMP3Q9Y3E7 222 aa16.95■□□□□ 0.3
HMGA2-204ENST00000403681 NUCB1Q02818 461 aa16.94■□□□□ 0.3
HMGA2-204ENST00000403681 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
HMGA2-204ENST00000403681 ZSCAN23Q3MJ62 389 aa16.94■□□□□ 0.3
HMGA2-204ENST00000403681 ERC2O15083 957 aa16.93■□□□□ 0.3
HMGA2-204ENST00000403681 ZNF592Q92610 1267 aa16.93■□□□□ 0.3
HMGA2-204ENST00000403681 WDR62O43379 1518 aa16.93■□□□□ 0.3
HMGA2-204ENST00000403681 SAMD9Q5K651 1589 aa16.92■□□□□ 0.3
HMGA2-204ENST00000403681 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
HMGA2-204ENST00000403681 USP19O94966 1318 aa16.92■□□□□ 0.3
HMGA2-204ENST00000403681 ZNF521Q96K83 1311 aa16.92■□□□□ 0.3
HMGA2-204ENST00000403681 GAS2L2Q8NHY3 880 aa16.92■□□□□ 0.3
HMGA2-204ENST00000403681 NAP1L2Q9ULW6 460 aaPredicted RBP16.92■□□□□ 0.3
HMGA2-204ENST00000403681 DYNC1I1O14576 645 aa16.92■□□□□ 0.3
HMGA2-204ENST00000403681 MCM5P33992 734 aa16.92■□□□□ 0.3
HMGA2-204ENST00000403681 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
HMGA2-204ENST00000403681 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
HMGA2-204ENST00000403681 SMC3Q9UQE7 1217 aa16.91■□□□□ 0.3
HMGA2-204ENST00000403681 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
HMGA2-204ENST00000403681 NUP160Q12769 1436 aa16.91■□□□□ 0.3
HMGA2-204ENST00000403681 ADAMTS12P58397 1594 aa16.91■□□□□ 0.3
HMGA2-204ENST00000403681 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
HMGA2-204ENST00000403681 HTATSF1O43719 755 aaKnown RBP16.9■□□□□ 0.3
HMGA2-204ENST00000403681 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
HMGA2-204ENST00000403681 KIF3AQ9Y496 699 aa16.9■□□□□ 0.3
HMGA2-204ENST00000403681 ALDH1L2Q3SY69 923 aa16.9■□□□□ 0.3
HMGA2-204ENST00000403681 RBM25P49756 843 aaKnown RBP16.89■□□□□ 0.29
HMGA2-204ENST00000403681 CARD14Q9BXL6 1004 aa16.89■□□□□ 0.29
HMGA2-204ENST00000403681 BCORL1Q5H9F3 1711 aa16.89■□□□□ 0.29
HMGA2-204ENST00000403681 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.29
HMGA2-204ENST00000403681 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.29
HMGA2-204ENST00000403681 C14orf37Q86TY3 774 aa16.89■□□□□ 0.29
HMGA2-204ENST00000403681 ZKSCAN5Q9Y2L8 839 aa16.89■□□□□ 0.29
HMGA2-204ENST00000403681 CCDC27Q2M243 656 aa16.88■□□□□ 0.29
HMGA2-204ENST00000403681 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
HMGA2-204ENST00000403681 FAM135AQ9P2D6 1515 aa16.88■□□□□ 0.29
HMGA2-204ENST00000403681 LETM1O95202 739 aaPredicted RBP16.88■□□□□ 0.29
HMGA2-204ENST00000403681 GAS2L3Q86XJ1 694 aa16.88■□□□□ 0.29
HMGA2-204ENST00000403681 PRIM1P49642 420 aaKnown RBP16.88■□□□□ 0.29
HMGA2-204ENST00000403681 CBX1P83916 185 aa16.88■□□□□ 0.29
HMGA2-204ENST00000403681 ADGRF5Q8IZF2 1346 aa16.88■□□□□ 0.29
HMGA2-204ENST00000403681 A0A0G2JS52 829 aa16.88■□□□□ 0.29
HMGA2-204ENST00000403681 SPC24Q8NBT2 197 aa16.88■□□□□ 0.29
HMGA2-204ENST00000403681 FIBPO43427 364 aa16.87■□□□□ 0.29
HMGA2-204ENST00000403681 HS1BP3Q53T59 392 aa16.87■□□□□ 0.29
HMGA2-204ENST00000403681 AEBP2Q6ZN18 517 aaPredicted RBP16.87■□□□□ 0.29
HMGA2-204ENST00000403681 TPM3P06753 285 aa16.87■□□□□ 0.29
HMGA2-204ENST00000403681 FAM184AQ8NB25 1140 aa16.87■□□□□ 0.29
HMGA2-204ENST00000403681 ADGRL2O95490 1459 aa16.87■□□□□ 0.29
HMGA2-204ENST00000403681 GOLGA6L19H0YKK7 550 aa16.87■□□□□ 0.29
HMGA2-204ENST00000403681 THUMPD2Q9BTF0 503 aaKnown RBP16.87■□□□□ 0.29
HMGA2-204ENST00000403681 MBD5Q9P267 1494 aa16.86■□□□□ 0.29
HMGA2-204ENST00000403681 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
HMGA2-204ENST00000403681 WDR33Q9C0J8 1336 aaKnown RBP16.86■□□□□ 0.29
HMGA2-204ENST00000403681 A2MP01023 1474 aa16.85■□□□□ 0.29
HMGA2-204ENST00000403681 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
HMGA2-204ENST00000403681 COG3Q96JB2 828 aa16.85■□□□□ 0.29
HMGA2-204ENST00000403681 TAOK2Q9UL54 1235 aa16.85■□□□□ 0.29
HMGA2-204ENST00000403681 LRSAM1Q6UWE0 723 aa16.85■□□□□ 0.29
HMGA2-204ENST00000403681 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
HMGA2-204ENST00000403681 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
HMGA2-204ENST00000403681 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
HMGA2-204ENST00000403681 FCHSD2O94868 740 aa16.84■□□□□ 0.29
HMGA2-204ENST00000403681 PDCL2Q8N4E4 241 aa16.84■□□□□ 0.29
HMGA2-204ENST00000403681 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
HMGA2-204ENST00000403681 BECN2A8MW95 431 aa16.84■□□□□ 0.29
HMGA2-204ENST00000403681 TNNT3P45378 269 aaPredicted RBP16.83■□□□□ 0.29
HMGA2-204ENST00000403681 USP25Q9UHP3 1055 aa16.83■□□□□ 0.29
HMGA2-204ENST00000403681 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
HMGA2-204ENST00000403681 ITSN2Q9NZM3 1697 aa16.83■□□□□ 0.28
HMGA2-204ENST00000403681 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
HMGA2-204ENST00000403681 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.83■□□□□ 0.28
HMGA2-204ENST00000403681 NOL7Q9UMY1 257 aaKnown RBP16.82■□□□□ 0.28
HMGA2-204ENST00000403681 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
HMGA2-204ENST00000403681 SMARCA5O60264 1052 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-204ENST00000403681 RBSNQ9H1K0 784 aa16.82■□□□□ 0.28
HMGA2-204ENST00000403681 FKBP5Q13451 457 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-204ENST00000403681 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
HMGA2-204ENST00000403681 TRIM5Q9C035 493 aa16.81■□□□□ 0.28
HMGA2-204ENST00000403681 BICD2Q8TD16 824 aa16.81■□□□□ 0.28
HMGA2-204ENST00000403681 GDPD2Q9HCC8 539 aa16.81■□□□□ 0.28
HMGA2-204ENST00000403681 ZMYM3Q14202 1370 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms