RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 NEFMP07197 916 aa8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 PPP4R3CPQ6ZMV5 832 aa8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 NCOA3Q9Y6Q9 1424 aa8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 CAMTA1Q9Y6Y1 1673 aa8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 ROCK2O75116 1388 aaKnown RBP8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 BRD2P25440 801 aaKnown RBP8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 PIK3C2AO00443 1686 aa8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 DISP3Q9P2K9 1392 aa8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 ZBED9Q6R2W3 1325 aa8.54□□□□□ -1.04
CEACAM1-207ENST00000403444 LTKP29376 864 aa8.53□□□□□ -1.04
CEACAM1-207ENST00000403444 RCAN3Q9UKA8 241 aa8.53□□□□□ -1.04
CEACAM1-207ENST00000403444 NPHP4O75161 1426 aaPredicted RBP8.53□□□□□ -1.04
CEACAM1-207ENST00000403444 RGPD1P0DJD0 1748 aa8.53□□□□□ -1.04
CEACAM1-207ENST00000403444 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.04
CEACAM1-207ENST00000403444 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.04
CEACAM1-207ENST00000403444 PANK3Q9H999 370 aa8.52□□□□□ -1.05
CEACAM1-207ENST00000403444 COL22A1Q8NFW1 1626 aaPredicted RBP8.51□□□□□ -1.05
CEACAM1-207ENST00000403444 SSH2Q76I76 1423 aa8.51□□□□□ -1.05
CEACAM1-207ENST00000403444 MED1Q15648 1581 aaPredicted RBP8.51□□□□□ -1.05
CEACAM1-207ENST00000403444 CEBPAP49715 358 aaPredicted RBP8.51□□□□□ -1.05
CEACAM1-207ENST00000403444 FRAT1Q92837 279 aaPredicted RBP8.51□□□□□ -1.05
CEACAM1-207ENST00000403444 SPRYD3Q8NCJ5 442 aa8.51□□□□□ -1.05
CEACAM1-207ENST00000403444 RRP7AQ9Y3A4 280 aaKnown RBP8.51□□□□□ -1.05
CEACAM1-207ENST00000403444 DCCP43146 1447 aa8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 RRP9O43818 475 aaKnown RBP8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 HOMEZQ8IX15 550 aa8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 BCL2L13Q9BXK5 485 aa8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 ROBO2Q9HCK4 1378 aa8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 CPSF1Q10570 1443 aaKnown RBP8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 LMO7Q8WWI1 1683 aa8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 CRBNQ96SW2 442 aa8.5□□□□□ -1.05
CEACAM1-207ENST00000403444 VGFO15240 615 aaPredicted RBP8.49□□□□□ -1.05
CEACAM1-207ENST00000403444 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 C20orf194Q5TEA3 1177 aa8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 KNSTRNQ9Y448 316 aa8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 ANKARQ7Z5J8 1434 aa8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 IQSEC2Q5JU85 1478 aa8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 NPC1L1Q9UHC9 1359 aa8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 HSP90AA1P07900 732 aaKnown RBP8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 TBX22Q9Y458 520 aa8.48□□□□□ -1.05
CEACAM1-207ENST00000403444 PLEKHH1Q9ULM0 1364 aa8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 SMG6Q86US8 1419 aaKnown RBP8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 CLUAP1Q96AJ1 413 aa8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 PEAK1Q9H792 1746 aa8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 RRP1P56182 461 aaKnown RBP8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 CFAP70Q5T0N1 1121 aa8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 NINLQ9Y2I6 1382 aa8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 COL18A1P39060 1754 aa8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 WNK3Q9BYP7 1800 aa8.47□□□□□ -1.05
CEACAM1-207ENST00000403444 SAMD1Q6SPF0 538 aaPredicted RBP8.46□□□□□ -1.05
CEACAM1-207ENST00000403444 ADGRL3Q9HAR2 1447 aa8.46□□□□□ -1.06
CEACAM1-207ENST00000403444 IPO9Q96P70 1041 aaKnown RBP8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 SLIT3O75094 1523 aa8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 PPM1GO15355 546 aaPredicted RBP8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 PDE4AP27815 886 aa8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 MLECQ14165 292 aa8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 ADAMTS8Q9UP79 889 aa8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 AHDC1Q5TGY3 1603 aaPredicted RBP8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 ABCC6O95255 1503 aa8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
CEACAM1-207ENST00000403444 POLR3AO14802 1390 aaPredicted RBP8.44□□□□□ -1.06
CEACAM1-207ENST00000403444 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
CEACAM1-207ENST00000403444 LTN1O94822 1766 aa8.44□□□□□ -1.06
CEACAM1-207ENST00000403444 PER1O15534 1290 aaPredicted RBP8.44□□□□□ -1.06
CEACAM1-207ENST00000403444 THEMISQ8N1K5 641 aaPredicted RBP8.44□□□□□ -1.06
CEACAM1-207ENST00000403444 MYBBP1AQ9BQG0 1328 aaKnown RBP8.44□□□□□ -1.06
CEACAM1-207ENST00000403444 GTF2E1P29083 439 aaPredicted RBP8.44□□□□□ -1.06
CEACAM1-207ENST00000403444 NLRP13Q86W25 1043 aa8.44□□□□□ -1.06
CEACAM1-207ENST00000403444 PARD3Q8TEW0 1356 aa8.43□□□□□ -1.06
CEACAM1-207ENST00000403444 APAF1O14727 1248 aa8.43□□□□□ -1.06
CEACAM1-207ENST00000403444 C14orf37Q86TY3 774 aa8.43□□□□□ -1.06
CEACAM1-207ENST00000403444 SLKQ9H2G2 1235 aaPredicted RBP8.43□□□□□ -1.06
CEACAM1-207ENST00000403444 NFAT5O94916 1531 aa8.43□□□□□ -1.06
CEACAM1-207ENST00000403444 TMF1P82094 1093 aa8.42□□□□□ -1.06
CEACAM1-207ENST00000403444 IPO4Q8TEX9 1081 aaKnown RBP8.42□□□□□ -1.06
CEACAM1-207ENST00000403444 STK26Q9P289 416 aa8.42□□□□□ -1.06
CEACAM1-207ENST00000403444 ZFP91Q96JP5 570 aaPredicted RBP8.42□□□□□ -1.06
CEACAM1-207ENST00000403444 FAM208AQ9UK61 1670 aaKnown RBP8.42□□□□□ -1.06
CEACAM1-207ENST00000403444 PXDNQ92626 1479 aa8.41□□□□□ -1.06
CEACAM1-207ENST00000403444 PLCD3Q8N3E9 789 aa8.41□□□□□ -1.06
CEACAM1-207ENST00000403444 TRAK1Q9UPV9 953 aa8.41□□□□□ -1.06
CEACAM1-207ENST00000403444 PLCH1Q4KWH8 1693 aa8.41□□□□□ -1.06
CEACAM1-207ENST00000403444 ADAMTS7Q9UKP4 1686 aa8.41□□□□□ -1.06
CEACAM1-207ENST00000403444 COL16A1Q07092 1604 aaPredicted RBP8.4□□□□□ -1.06
CEACAM1-207ENST00000403444 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.06
CEACAM1-207ENST00000403444 VIRMAQ69YN4 1812 aaKnown RBP8.4□□□□□ -1.06
CEACAM1-207ENST00000403444 PRDM4Q9UKN5 801 aa8.4□□□□□ -1.06
CEACAM1-207ENST00000403444 INSRP06213 1382 aa8.4□□□□□ -1.06
CEACAM1-207ENST00000403444 BCAR3O75815 825 aa8.4□□□□□ -1.07
CEACAM1-207ENST00000403444 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.07
CEACAM1-207ENST00000403444 GSE1Q14687 1217 aa8.39□□□□□ -1.07
CEACAM1-207ENST00000403444 CENPJQ9HC77 1338 aaPredicted RBP8.39□□□□□ -1.07
CEACAM1-207ENST00000403444 U2SURPO15042 1029 aaKnown RBP8.39□□□□□ -1.07
CEACAM1-207ENST00000403444 TMEM132EQ6IEE7 984 aa8.39□□□□□ -1.07
CEACAM1-207ENST00000403444 USP35Q9P2H5 1018 aa8.39□□□□□ -1.07
CEACAM1-207ENST00000403444 COG6Q9Y2V7 657 aa8.39□□□□□ -1.07
CEACAM1-207ENST00000403444 ROBO1Q9Y6N7 1651 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms