RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 DEFB132Q7Z7B7 95 aa18.06■□□□□ 0.48
PRAME-204ENST00000403441 PRR36Q9H6K5 1346 aa18.05■□□□□ 0.48
PRAME-204ENST00000403441 NGDNQ8NEJ9 315 aaKnown RBP18.05■□□□□ 0.48
PRAME-204ENST00000403441 BTG4Q9NY30 223 aa18.05■□□□□ 0.48
PRAME-204ENST00000403441 FAM98CQ17RN3 349 aaKnown RBP18.04■□□□□ 0.48
PRAME-204ENST00000403441 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
PRAME-204ENST00000403441 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
PRAME-204ENST00000403441 ARHGEF28Q8N1W1 1705 aaKnown RBP18.02■□□□□ 0.48
PRAME-204ENST00000403441 CRYBG1Q9Y4K1 1723 aa18.01■□□□□ 0.47
PRAME-204ENST00000403441 BAG6P46379 1132 aa18■□□□□ 0.47
PRAME-204ENST00000403441 PRDM11Q9NQV5 511 aa18■□□□□ 0.47
PRAME-204ENST00000403441 ATP7BP35670 1465 aa18■□□□□ 0.47
PRAME-204ENST00000403441 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
PRAME-204ENST00000403441 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
PRAME-204ENST00000403441 NUDT16Q96DE0 195 aaKnown RBP17.98■□□□□ 0.47
PRAME-204ENST00000403441 RGPD1P0DJD0 1748 aa17.97■□□□□ 0.47
PRAME-204ENST00000403441 LRP5O75197 1615 aa17.96■□□□□ 0.47
PRAME-204ENST00000403441 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
PRAME-204ENST00000403441 KIAA0232Q92628 1395 aa17.95■□□□□ 0.46
PRAME-204ENST00000403441 PHRF1Q9P1Y6 1649 aaKnown RBP17.95■□□□□ 0.46
PRAME-204ENST00000403441 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
PRAME-204ENST00000403441 KIAA1210Q9ULL0 1709 aa17.93■□□□□ 0.46
PRAME-204ENST00000403441 CDK19Q9BWU1 502 aa17.93■□□□□ 0.46
PRAME-204ENST00000403441 POLR3AO14802 1390 aaPredicted RBP17.92■□□□□ 0.46
PRAME-204ENST00000403441 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
PRAME-204ENST00000403441 PSDA5PKW4 1024 aaPredicted RBP17.91■□□□□ 0.46
PRAME-204ENST00000403441 CHRNA2Q15822 529 aa17.91■□□□□ 0.46
PRAME-204ENST00000403441 FAM182BQ5T319 152 aa17.91■□□□□ 0.46
PRAME-204ENST00000403441 STRN4Q9NRL3 753 aa17.91■□□□□ 0.46
PRAME-204ENST00000403441 CCDC61Q9Y6R9 512 aa17.91■□□□□ 0.46
PRAME-204ENST00000403441 DISP2A7MBM2 1401 aa17.9■□□□□ 0.46
PRAME-204ENST00000403441 ZC3H6P61129 1189 aaKnown RBP17.9■□□□□ 0.46
PRAME-204ENST00000403441 EN1Q05925 392 aaPredicted RBP17.9■□□□□ 0.46
PRAME-204ENST00000403441 NUTM2GQ5VZR2 741 aa17.9■□□□□ 0.46
PRAME-204ENST00000403441 ACEP12821 1306 aa17.9■□□□□ 0.46
PRAME-204ENST00000403441 TNS1Q9HBL0 1735 aaKnown RBP17.89■□□□□ 0.46
PRAME-204ENST00000403441 NRKQ7Z2Y5 1582 aa17.88■□□□□ 0.45
PRAME-204ENST00000403441 NBPF8Q3BBV2 869 aa17.88■□□□□ 0.45
PRAME-204ENST00000403441 PLEKHG3A1L390 1219 aa17.87■□□□□ 0.45
PRAME-204ENST00000403441 EVA1CP58658 441 aa17.87■□□□□ 0.45
PRAME-204ENST00000403441 FAM196AQ6ZSG2 479 aa17.87■□□□□ 0.45
PRAME-204ENST00000403441 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
PRAME-204ENST00000403441 SSH2Q76I76 1423 aa17.87■□□□□ 0.45
PRAME-204ENST00000403441 USP35Q9P2H5 1018 aa17.86■□□□□ 0.45
PRAME-204ENST00000403441 CPDO75976 1380 aa17.85■□□□□ 0.45
PRAME-204ENST00000403441 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
PRAME-204ENST00000403441 PPIP5K1Q6PFW1 1433 aa17.84■□□□□ 0.45
PRAME-204ENST00000403441 USP19O94966 1318 aa17.84■□□□□ 0.45
PRAME-204ENST00000403441 TRIM37O94972 964 aa17.84■□□□□ 0.45
PRAME-204ENST00000403441 R3HDM1Q15032 1099 aaKnown RBP17.84■□□□□ 0.45
PRAME-204ENST00000403441 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
PRAME-204ENST00000403441 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.45
PRAME-204ENST00000403441 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
PRAME-204ENST00000403441 PDE3BQ13370 1112 aa17.83■□□□□ 0.44
PRAME-204ENST00000403441 NBPF1Q3BBV0 1214 aa17.83■□□□□ 0.44
PRAME-204ENST00000403441 NLRP13Q86W25 1043 aa17.82■□□□□ 0.44
PRAME-204ENST00000403441 LMO7Q8WWI1 1683 aa17.82■□□□□ 0.44
PRAME-204ENST00000403441 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
PRAME-204ENST00000403441 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
PRAME-204ENST00000403441 APBA3O96018 575 aa17.81■□□□□ 0.44
PRAME-204ENST00000403441 EZH2Q15910 746 aaKnown RBP17.81■□□□□ 0.44
PRAME-204ENST00000403441 LARP1Q6PKG0 1096 aaKnown RBP17.81■□□□□ 0.44
PRAME-204ENST00000403441 TCP11L2Q8N4U5 519 aa17.81■□□□□ 0.44
PRAME-204ENST00000403441 QRICH2Q9H0J4 1663 aa17.8■□□□□ 0.44
PRAME-204ENST00000403441 CAMKK2Q96RR4 588 aa17.8■□□□□ 0.44
PRAME-204ENST00000403441 GCP02774 474 aa17.79■□□□□ 0.44
PRAME-204ENST00000403441 CABP2Q9NPB3 220 aa17.79■□□□□ 0.44
PRAME-204ENST00000403441 THRAP3Q9Y2W1 955 aaKnown RBP17.79■□□□□ 0.44
PRAME-204ENST00000403441 COL5A2P05997 1499 aaPredicted RBP17.78■□□□□ 0.44
PRAME-204ENST00000403441 USP6P35125 1406 aa17.76■□□□□ 0.43
PRAME-204ENST00000403441 PARP4Q9UKK3 1724 aaKnown RBP17.75■□□□□ 0.43
PRAME-204ENST00000403441 CRB1P82279 1406 aa17.75■□□□□ 0.43
PRAME-204ENST00000403441 RREB1Q92766 1687 aa17.75■□□□□ 0.43
PRAME-204ENST00000403441 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
PRAME-204ENST00000403441 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
PRAME-204ENST00000403441 TRIM26Q12899 539 aaPredicted RBP17.75■□□□□ 0.43
PRAME-204ENST00000403441 NLRP6P59044 892 aa17.74■□□□□ 0.43
PRAME-204ENST00000403441 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
PRAME-204ENST00000403441 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
PRAME-204ENST00000403441 SLIT3O75094 1523 aa17.73■□□□□ 0.43
PRAME-204ENST00000403441 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
PRAME-204ENST00000403441 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
PRAME-204ENST00000403441 AATKQ6ZMQ8 1374 aa17.73■□□□□ 0.43
PRAME-204ENST00000403441 OVOS2A0A0G2JMS6 1433 aa17.72■□□□□ 0.43
PRAME-204ENST00000403441 OVOS2A0A0J9YW53 1432 aa17.72■□□□□ 0.43
PRAME-204ENST00000403441 OVOS2Q6IE36 1432 aa17.72■□□□□ 0.43
PRAME-204ENST00000403441 PIK3C2AO00443 1686 aa17.71■□□□□ 0.42
PRAME-204ENST00000403441 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
PRAME-204ENST00000403441 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
PRAME-204ENST00000403441 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
PRAME-204ENST00000403441 L3MBTL2Q969R5 705 aa17.69■□□□□ 0.42
PRAME-204ENST00000403441 CPSF1Q10570 1443 aaKnown RBP17.68■□□□□ 0.42
PRAME-204ENST00000403441 ROCK2O75116 1388 aaKnown RBP17.67■□□□□ 0.42
PRAME-204ENST00000403441 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
PRAME-204ENST00000403441 DDB1Q16531 1140 aa17.67■□□□□ 0.42
PRAME-204ENST00000403441 RGPD3A6NKT7 1758 aaPredicted RBP17.66■□□□□ 0.42
PRAME-204ENST00000403441 RGPD4Q7Z3J3 1758 aa17.66■□□□□ 0.42
PRAME-204ENST00000403441 KCNH5Q8NCM2 988 aa17.66■□□□□ 0.42
PRAME-204ENST00000403441 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
PRAME-204ENST00000403441 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms