RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 SSH2Q76I76 1423 aa21.82■■□□□ 1.08
CASP9-204ENST00000400777 NLRP13Q86W25 1043 aa21.81■■□□□ 1.08
CASP9-204ENST00000400777 NME9Q86XW9 330 aa21.81■■□□□ 1.08
CASP9-204ENST00000400777 SLAIN2Q9P270 581 aa21.81■■□□□ 1.08
CASP9-204ENST00000400777 MRS2Q9HD23 443 aa21.81■■□□□ 1.08
CASP9-204ENST00000400777 NRKQ7Z2Y5 1582 aa21.8■■□□□ 1.08
CASP9-204ENST00000400777 TTC21AQ8NDW8 1320 aa21.8■■□□□ 1.08
CASP9-204ENST00000400777 PPP2R1AP30153 589 aa21.8■■□□□ 1.08
CASP9-204ENST00000400777 TNNT2P45379 298 aaPredicted RBP21.8■■□□□ 1.08
CASP9-204ENST00000400777 CCDC184Q52MB2 194 aa21.8■■□□□ 1.08
CASP9-204ENST00000400777 BRD4O60885 1362 aaPredicted RBP21.78■■□□□ 1.08
CASP9-204ENST00000400777 KIF1AQ12756 1690 aa21.78■■□□□ 1.08
CASP9-204ENST00000400777 PAK3O75914 559 aaPredicted RBP21.77■■□□□ 1.08
CASP9-204ENST00000400777 COG3Q96JB2 828 aa21.77■■□□□ 1.08
CASP9-204ENST00000400777 KIF20BQ96Q89 1820 aa21.77■■□□□ 1.08
CASP9-204ENST00000400777 BRINP3Q76B58 766 aa21.76■■□□□ 1.07
CASP9-204ENST00000400777 ZRANB1Q9UGI0 708 aa21.76■■□□□ 1.07
CASP9-204ENST00000400777 XPCQ01831 940 aaPredicted RBP21.75■■□□□ 1.07
CASP9-204ENST00000400777 NPHP3Q7Z494 1330 aa21.74■■□□□ 1.07
CASP9-204ENST00000400777 KRT28Q7Z3Y7 464 aa21.73■■□□□ 1.07
CASP9-204ENST00000400777 ABTB2Q8N961 1025 aa21.73■■□□□ 1.07
CASP9-204ENST00000400777 ANKRD26Q9UPS8 1709 aa21.72■■□□□ 1.07
CASP9-204ENST00000400777 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
CASP9-204ENST00000400777 OVOS2A0A0J9YW53 1432 aa21.71■■□□□ 1.07
CASP9-204ENST00000400777 OVOS2Q6IE36 1432 aa21.71■■□□□ 1.07
CASP9-204ENST00000400777 NLRP6P59044 892 aa21.71■■□□□ 1.07
CASP9-204ENST00000400777 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.07
CASP9-204ENST00000400777 USP31Q70CQ4 1352 aa21.7■■□□□ 1.06
CASP9-204ENST00000400777 MTHFSP49914 203 aa21.69■■□□□ 1.06
CASP9-204ENST00000400777 NUTM2GQ5VZR2 741 aa21.69■■□□□ 1.06
CASP9-204ENST00000400777 PIK3C2AO00443 1686 aa21.68■■□□□ 1.06
CASP9-204ENST00000400777 FAM9BQ8IZU0 186 aa21.67■■□□□ 1.06
CASP9-204ENST00000400777 FBLN1P23142 703 aa21.66■■□□□ 1.06
CASP9-204ENST00000400777 LMOD2Q6P5Q4 547 aa21.66■■□□□ 1.06
CASP9-204ENST00000400777 PNISRQ8TF01 805 aaKnown RBP21.66■■□□□ 1.06
CASP9-204ENST00000400777 AATKQ6ZMQ8 1374 aa21.65■■□□□ 1.06
CASP9-204ENST00000400777 YTHDC1Q96MU7 727 aaKnown RBP21.65■■□□□ 1.06
CASP9-204ENST00000400777 PXDNQ92626 1479 aa21.64■■□□□ 1.06
CASP9-204ENST00000400777 SBNO1A3KN83 1393 aa21.64■■□□□ 1.05
CASP9-204ENST00000400777 TOM1O60784 492 aa21.64■■□□□ 1.05
CASP9-204ENST00000400777 TRPM3Q9HCF6 1732 aaPredicted RBP21.63■■□□□ 1.05
CASP9-204ENST00000400777 SOX12O15370 315 aa21.63■■□□□ 1.05
CASP9-204ENST00000400777 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
CASP9-204ENST00000400777 CFAP53Q96M91 514 aa21.62■■□□□ 1.05
CASP9-204ENST00000400777 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
CASP9-204ENST00000400777 RRS1Q15050 365 aaKnown RBP21.62■■□□□ 1.05
CASP9-204ENST00000400777 SOS2Q07890 1332 aaPredicted RBP21.61■■□□□ 1.05
CASP9-204ENST00000400777 EMILIN1Q9Y6C2 1016 aa21.6■■□□□ 1.05
CASP9-204ENST00000400777 TNS3Q68CZ2 1445 aa21.6■■□□□ 1.05
CASP9-204ENST00000400777 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
CASP9-204ENST00000400777 IQSEC2Q5JU85 1478 aa21.59■■□□□ 1.05
CASP9-204ENST00000400777 USP54Q70EL1 1684 aa21.58■■□□□ 1.05
CASP9-204ENST00000400777 CERKQ8TCT0 537 aa21.58■■□□□ 1.05
CASP9-204ENST00000400777 ROBO1Q9Y6N7 1651 aa21.58■■□□□ 1.05
CASP9-204ENST00000400777 UBAP1LF5GYI3 381 aa21.58■■□□□ 1.04
CASP9-204ENST00000400777 WDR43Q15061 677 aaKnown RBP eCLIP21.58■■□□□ 1.04
CASP9-204ENST00000400777 KCNH5Q8NCM2 988 aa21.58■■□□□ 1.04
CASP9-204ENST00000400777 ARHGEF10O15013 1369 aa21.57■■□□□ 1.04
CASP9-204ENST00000400777 SMG6Q86US8 1419 aaKnown RBP21.57■■□□□ 1.04
CASP9-204ENST00000400777 ALS2Q96Q42 1657 aa21.56■■□□□ 1.04
CASP9-204ENST00000400777 PLEKHG5O94827 1062 aa21.56■■□□□ 1.04
CASP9-204ENST00000400777 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
CASP9-204ENST00000400777 PNPLA6Q8IY17 1366 aa21.56■■□□□ 1.04
CASP9-204ENST00000400777 MARF1Q9Y4F3 1742 aaKnown RBP21.56■■□□□ 1.04
CASP9-204ENST00000400777 NHSL1Q5SYE7 1610 aa21.56■■□□□ 1.04
CASP9-204ENST00000400777 USP19O94966 1318 aa21.55■■□□□ 1.04
CASP9-204ENST00000400777 MAP3K19Q56UN5 1328 aa21.55■■□□□ 1.04
CASP9-204ENST00000400777 GCP02774 474 aa21.54■■□□□ 1.04
CASP9-204ENST00000400777 MAP2P11137 1827 aaKnown RBP21.54■■□□□ 1.04
CASP9-204ENST00000400777 INSRP06213 1382 aa21.53■■□□□ 1.04
CASP9-204ENST00000400777 CDK12Q9NYV4 1490 aaPredicted RBP21.53■■□□□ 1.04
CASP9-204ENST00000400777 ADAMTS8Q9UP79 889 aa21.53■■□□□ 1.04
CASP9-204ENST00000400777 DIAPH1O60610 1272 aaKnown RBP21.52■■□□□ 1.04
CASP9-204ENST00000400777 SLIT3O75094 1523 aa21.52■■□□□ 1.04
CASP9-204ENST00000400777 COL3A1P02461 1466 aaPredicted RBP21.51■■□□□ 1.03
CASP9-204ENST00000400777 AMPHP49418 695 aa21.51■■□□□ 1.03
CASP9-204ENST00000400777 NUDCQ9Y266 331 aa21.51■■□□□ 1.03
CASP9-204ENST00000400777 AHDC1Q5TGY3 1603 aaPredicted RBP21.51■■□□□ 1.03
CASP9-204ENST00000400777 NFAT5O94916 1531 aa21.5■■□□□ 1.03
CASP9-204ENST00000400777 LRRC59Q96AG4 307 aaKnown RBP21.5■■□□□ 1.03
CASP9-204ENST00000400777 FLT4P35916 1363 aa21.5■■□□□ 1.03
CASP9-204ENST00000400777 MED1Q15648 1581 aaPredicted RBP21.49■■□□□ 1.03
CASP9-204ENST00000400777 KIF24Q5T7B8 1368 aa21.49■■□□□ 1.03
CASP9-204ENST00000400777 CABLES1Q8TDN4 633 aa21.49■■□□□ 1.03
CASP9-204ENST00000400777 HNRNPUQ00839 825 aaKnown RBP eCLIP21.48■■□□□ 1.03
CASP9-204ENST00000400777 HSP90AB2PQ58FF8 381 aa21.48■■□□□ 1.03
CASP9-204ENST00000400777 U2SURPO15042 1029 aaKnown RBP21.47■■□□□ 1.03
CASP9-204ENST00000400777 SHPRHQ149N8 1683 aa21.47■■□□□ 1.03
CASP9-204ENST00000400777 ZBTB7CA1YPR0 619 aa21.46■■□□□ 1.03
CASP9-204ENST00000400777 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
CASP9-204ENST00000400777 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.03
CASP9-204ENST00000400777 ARHGEF25Q86VW2 580 aa21.46■■□□□ 1.03
CASP9-204ENST00000400777 PEAK1Q9H792 1746 aa21.46■■□□□ 1.03
CASP9-204ENST00000400777 HOXC9P31274 260 aa21.45■■□□□ 1.02
CASP9-204ENST00000400777 RTL1A6NKG5 1358 aa21.45■■□□□ 1.02
CASP9-204ENST00000400777 IL13P35225 146 aa21.45■■□□□ 1.02
CASP9-204ENST00000400777 ZC3H6P61129 1189 aaKnown RBP21.45■■□□□ 1.02
CASP9-204ENST00000400777 EIF4A2Q14240 407 aaKnown RBP21.43■■□□□ 1.02
CASP9-204ENST00000400777 IP6K1Q92551 441 aa21.43■■□□□ 1.02
CASP9-204ENST00000400777 BLMP54132 1417 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms