RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
LINC02408-201ENST00000400306 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
LINC02408-201ENST00000400306 TRAK1Q9UPV9 953 aa11.03□□□□□ -0.64
LINC02408-201ENST00000400306 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
LINC02408-201ENST00000400306 RBM6P78332 1123 aaKnown RBP11.03□□□□□ -0.64
LINC02408-201ENST00000400306 MS4A3Q96HJ5 214 aa11.02□□□□□ -0.65
LINC02408-201ENST00000400306 LRPPRCP42704 1394 aaKnown RBP11.02□□□□□ -0.65
LINC02408-201ENST00000400306 USP47Q96K76 1375 aa11.02□□□□□ -0.65
LINC02408-201ENST00000400306 NHSL1Q5SYE7 1610 aa11.01□□□□□ -0.65
LINC02408-201ENST00000400306 QRICH2Q9H0J4 1663 aa11.01□□□□□ -0.65
LINC02408-201ENST00000400306 HSPA5P11021 654 aaKnown RBP11□□□□□ -0.65
LINC02408-201ENST00000400306 SAFB2Q14151 953 aaKnown RBP eCLIP11□□□□□ -0.65
LINC02408-201ENST00000400306 KIF12Q96FN5 646 aa11□□□□□ -0.65
LINC02408-201ENST00000400306 AMOTL2Q9Y2J4 779 aa11□□□□□ -0.65
LINC02408-201ENST00000400306 PLEKHH1Q9ULM0 1364 aa11□□□□□ -0.65
LINC02408-201ENST00000400306 MYT1Q01538 1121 aa11□□□□□ -0.65
LINC02408-201ENST00000400306 QTRT2Q9H974 415 aaKnown RBP11□□□□□ -0.65
LINC02408-201ENST00000400306 ROBO2Q9HCK4 1378 aa11□□□□□ -0.65
LINC02408-201ENST00000400306 WAPLQ7Z5K2 1190 aa10.99□□□□□ -0.65
LINC02408-201ENST00000400306 DLC1Q96QB1 1528 aa10.98□□□□□ -0.65
LINC02408-201ENST00000400306 ABCC11Q96J66 1382 aa10.98□□□□□ -0.65
LINC02408-201ENST00000400306 PIK3R4Q99570 1358 aa10.98□□□□□ -0.65
LINC02408-201ENST00000400306 PRAM1Q96QH2 718 aa10.98□□□□□ -0.65
LINC02408-201ENST00000400306 TECPR2O15040 1411 aa10.98□□□□□ -0.65
LINC02408-201ENST00000400306 ST20-MTHFSA0A0A6YYL1 179 aa10.98□□□□□ -0.65
LINC02408-201ENST00000400306 EIF4G2P78344 907 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC02408-201ENST00000400306 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
LINC02408-201ENST00000400306 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
LINC02408-201ENST00000400306 NCOA3Q9Y6Q9 1424 aa10.96□□□□□ -0.65
LINC02408-201ENST00000400306 NALCNQ8IZF0 1738 aa10.96□□□□□ -0.65
LINC02408-201ENST00000400306 EIF3AQ14152 1382 aaKnown RBP10.96□□□□□ -0.65
LINC02408-201ENST00000400306 C8orf37Q96NL8 207 aa10.96□□□□□ -0.65
LINC02408-201ENST00000400306 POGKQ9P215 609 aa10.96□□□□□ -0.65
LINC02408-201ENST00000400306 CENPJQ9HC77 1338 aaPredicted RBP10.96□□□□□ -0.66
LINC02408-201ENST00000400306 MAP3K13O43283 966 aa10.95□□□□□ -0.66
LINC02408-201ENST00000400306 PTCH1Q13635 1447 aa10.95□□□□□ -0.66
LINC02408-201ENST00000400306 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
LINC02408-201ENST00000400306 C14orf37Q86TY3 774 aa10.95□□□□□ -0.66
LINC02408-201ENST00000400306 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
LINC02408-201ENST00000400306 CCDC125Q86Z20 511 aa10.93□□□□□ -0.66
LINC02408-201ENST00000400306 MARF1Q9Y4F3 1742 aaKnown RBP10.93□□□□□ -0.66
LINC02408-201ENST00000400306 ATF3P18847 181 aa10.93□□□□□ -0.66
LINC02408-201ENST00000400306 IFNLR1Q8IU57 520 aaPredicted RBP10.93□□□□□ -0.66
LINC02408-201ENST00000400306 TESK2Q96S53 571 aa10.93□□□□□ -0.66
LINC02408-201ENST00000400306 TULP4Q9NRJ4 1543 aa10.92□□□□□ -0.66
LINC02408-201ENST00000400306 EP400Q96L91 3159 aa10.92□□□□□ -0.66
LINC02408-201ENST00000400306 BRWD3Q6RI45 1802 aa10.91□□□□□ -0.66
LINC02408-201ENST00000400306 C11orf95C9JLR9 678 aaPredicted RBP10.91□□□□□ -0.66
LINC02408-201ENST00000400306 BRINP3Q76B58 766 aa10.91□□□□□ -0.66
LINC02408-201ENST00000400306 SIRT1Q96EB6 747 aa10.91□□□□□ -0.66
LINC02408-201ENST00000400306 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
LINC02408-201ENST00000400306 GSE1Q14687 1217 aa10.9□□□□□ -0.66
LINC02408-201ENST00000400306 POLR3GLQ9BT43 218 aa10.9□□□□□ -0.66
LINC02408-201ENST00000400306 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
LINC02408-201ENST00000400306 ADGRB2O60241 1585 aa10.9□□□□□ -0.66
LINC02408-201ENST00000400306 SPOCK2Q92563 424 aa10.9□□□□□ -0.67
LINC02408-201ENST00000400306 C19orf44Q9H6X5 657 aa10.9□□□□□ -0.67
LINC02408-201ENST00000400306 RGPD8O14715 1765 aaPredicted RBP10.89□□□□□ -0.67
LINC02408-201ENST00000400306 PNPLA6Q8IY17 1366 aa10.89□□□□□ -0.67
LINC02408-201ENST00000400306 FMN2Q9NZ56 1722 aa10.89□□□□□ -0.67
LINC02408-201ENST00000400306 ADGRL3Q9HAR2 1447 aa10.89□□□□□ -0.67
LINC02408-201ENST00000400306 NUTM2FA1L443 756 aa10.88□□□□□ -0.67
LINC02408-201ENST00000400306 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
LINC02408-201ENST00000400306 LRRC59Q96AG4 307 aaKnown RBP10.88□□□□□ -0.67
LINC02408-201ENST00000400306 TRPC5Q9UL62 973 aaPredicted RBP10.88□□□□□ -0.67
LINC02408-201ENST00000400306 USP32Q8NFA0 1604 aa10.88□□□□□ -0.67
LINC02408-201ENST00000400306 SBNO2Q9Y2G9 1366 aa10.88□□□□□ -0.67
LINC02408-201ENST00000400306 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
LINC02408-201ENST00000400306 LHX8Q68G74 356 aa10.88□□□□□ -0.67
LINC02408-201ENST00000400306 CABP2Q9NPB3 220 aa10.88□□□□□ -0.67
LINC02408-201ENST00000400306 USP21Q9UK80 565 aa10.88□□□□□ -0.67
LINC02408-201ENST00000400306 CDC42BPGQ6DT37 1551 aa10.87□□□□□ -0.67
LINC02408-201ENST00000400306 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
LINC02408-201ENST00000400306 ATRNO75882 1429 aa10.87□□□□□ -0.67
LINC02408-201ENST00000400306 DCCP43146 1447 aa10.87□□□□□ -0.67
LINC02408-201ENST00000400306 TMF1P82094 1093 aa10.87□□□□□ -0.67
LINC02408-201ENST00000400306 CDK19Q9BWU1 502 aa10.87□□□□□ -0.67
LINC02408-201ENST00000400306 MYOM1P52179 1685 aa10.86□□□□□ -0.67
LINC02408-201ENST00000400306 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.86□□□□□ -0.67
LINC02408-201ENST00000400306 WASLO00401 505 aaPredicted RBP10.86□□□□□ -0.67
LINC02408-201ENST00000400306 SRPK2P78362 688 aaKnown RBP10.86□□□□□ -0.67
LINC02408-201ENST00000400306 KIF7Q2M1P5 1343 aa10.86□□□□□ -0.67
LINC02408-201ENST00000400306 EVC2Q86UK5 1308 aa10.86□□□□□ -0.67
LINC02408-201ENST00000400306 CCDC7Q96M83 1385 aa10.86□□□□□ -0.67
LINC02408-201ENST00000400306 BLMP54132 1417 aaPredicted RBP10.86□□□□□ -0.67
LINC02408-201ENST00000400306 ADAMTS2O95450 1211 aa10.85□□□□□ -0.67
LINC02408-201ENST00000400306 PYGBP11216 843 aa10.85□□□□□ -0.67
LINC02408-201ENST00000400306 WASHC2AQ641Q2 1341 aa10.85□□□□□ -0.67
LINC02408-201ENST00000400306 MST1RQ04912 1400 aa10.85□□□□□ -0.67
LINC02408-201ENST00000400306 TIE1P35590 1138 aa10.85□□□□□ -0.67
LINC02408-201ENST00000400306 PRR36Q9H6K5 1346 aa10.85□□□□□ -0.67
LINC02408-201ENST00000400306 COL22A1Q8NFW1 1626 aaPredicted RBP10.84□□□□□ -0.67
LINC02408-201ENST00000400306 TOPAZ1Q8N9V7 1692 aa10.84□□□□□ -0.67
LINC02408-201ENST00000400306 TRPC6Q9Y210 931 aa10.84□□□□□ -0.67
LINC02408-201ENST00000400306 ATP7BP35670 1465 aa10.83□□□□□ -0.67
LINC02408-201ENST00000400306 ITSN1Q15811 1721 aa10.83□□□□□ -0.68
LINC02408-201ENST00000400306 IFNL1Q8IU54 200 aa10.82□□□□□ -0.68
LINC02408-201ENST00000400306 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
LINC02408-201ENST00000400306 NUDT16Q96DE0 195 aaKnown RBP10.82□□□□□ -0.68
LINC02408-201ENST00000400306 ATN1P54259 1190 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms