RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 BCCIPQ9P287 314 aaKnown RBP eCLIP11.91□□□□□ -0.5
PTPRM-203ENST00000400060 UBXN4Q92575 508 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 CHMP4AQ9BY43 222 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 SMC3Q9UQE7 1217 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 TNNT1P13805 278 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 CAVIN2O95810 425 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
PTPRM-203ENST00000400060 GPATCH11Q8N954 259 aa11.91□□□□□ -0.5
PTPRM-203ENST00000400060 GTF2F1P35269 517 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTPRM-203ENST00000400060 ADAMTS8Q9UP79 889 aa11.9□□□□□ -0.5
PTPRM-203ENST00000400060 TDO2P48775 406 aa11.9□□□□□ -0.5
PTPRM-203ENST00000400060 WDR63Q8IWG1 891 aa11.9□□□□□ -0.5
PTPRM-203ENST00000400060 BRMS1Q9HCU9 246 aa11.9□□□□□ -0.5
PTPRM-203ENST00000400060 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.51
PTPRM-203ENST00000400060 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
PTPRM-203ENST00000400060 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
PTPRM-203ENST00000400060 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
PTPRM-203ENST00000400060 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
PTPRM-203ENST00000400060 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
PTPRM-203ENST00000400060 SSFA2P28290 1259 aa11.89□□□□□ -0.51
PTPRM-203ENST00000400060 NAIPQ13075 1403 aa11.89□□□□□ -0.51
PTPRM-203ENST00000400060 JAKMIP3Q5VZ66 844 aa11.88□□□□□ -0.51
PTPRM-203ENST00000400060 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
PTPRM-203ENST00000400060 TEX2Q8IWB9 1127 aa11.88□□□□□ -0.51
PTPRM-203ENST00000400060 CCAR2Q8N163 923 aaKnown RBP11.88□□□□□ -0.51
PTPRM-203ENST00000400060 RUFY1Q96T51 708 aa11.88□□□□□ -0.51
PTPRM-203ENST00000400060 CCDC191Q8NCU4 936 aa11.88□□□□□ -0.51
PTPRM-203ENST00000400060 GPATCH3Q96I76 525 aa11.88□□□□□ -0.51
PTPRM-203ENST00000400060 ADCY5O95622 1261 aa11.88□□□□□ -0.51
PTPRM-203ENST00000400060 SUPT6HQ7KZ85 1726 aaKnown RBP11.88□□□□□ -0.51
PTPRM-203ENST00000400060 HMGB1P09429 215 aaKnown RBP11.87□□□□□ -0.51
PTPRM-203ENST00000400060 U2AF1L5P0DN76 240 aaPredicted RBP11.87□□□□□ -0.51
PTPRM-203ENST00000400060 SRPK2P78362 688 aaKnown RBP11.87□□□□□ -0.51
PTPRM-203ENST00000400060 U2AF1Q01081 240 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTPRM-203ENST00000400060 PDCP20941 246 aa11.87□□□□□ -0.51
PTPRM-203ENST00000400060 SRRTQ9BXP5 876 aaKnown RBP11.87□□□□□ -0.51
PTPRM-203ENST00000400060 MCM3P25205 808 aa11.87□□□□□ -0.51
PTPRM-203ENST00000400060 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
PTPRM-203ENST00000400060 SPC24Q8NBT2 197 aa11.87□□□□□ -0.51
PTPRM-203ENST00000400060 PTPRGP23470 1445 aa11.87□□□□□ -0.51
PTPRM-203ENST00000400060 DNAAF4Q8WXU2 420 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 GSDMDP57764 484 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 GGT6Q6P531 493 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 KIF3BO15066 747 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
PTPRM-203ENST00000400060 TUBB4BP68371 445 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 CEP135Q66GS9 1140 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 MICALCLQ6ZW33 695 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 RUFY2Q8WXA3 655 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 PPP2R1AP30153 589 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 CCDC73Q6ZRK6 1079 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 BICD2Q8TD16 824 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTPRM-203ENST00000400060 GPRASP1Q5JY77 1395 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 KIAA1107Q9UPP5 1409 aa11.86□□□□□ -0.51
PTPRM-203ENST00000400060 CHD1LQ86WJ1 897 aa11.85□□□□□ -0.51
PTPRM-203ENST00000400060 HDAC5Q9UQL6 1122 aa11.85□□□□□ -0.51
PTPRM-203ENST00000400060 CAMSAP2Q08AD1 1489 aa11.85□□□□□ -0.51
PTPRM-203ENST00000400060 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
PTPRM-203ENST00000400060 SHTN1A0MZ66 631 aa11.85□□□□□ -0.51
PTPRM-203ENST00000400060 VGLL3A8MV65 326 aa11.85□□□□□ -0.51
PTPRM-203ENST00000400060 USP25Q9UHP3 1055 aa11.85□□□□□ -0.51
PTPRM-203ENST00000400060 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
PTPRM-203ENST00000400060 CBFA2T2O43439 604 aa11.84□□□□□ -0.51
PTPRM-203ENST00000400060 H3BQV1 296 aa11.84□□□□□ -0.51
PTPRM-203ENST00000400060 LIG1P18858 919 aa11.84□□□□□ -0.51
PTPRM-203ENST00000400060 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
PTPRM-203ENST00000400060 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
PTPRM-203ENST00000400060 MAP3K11Q16584 847 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 NBPF8Q3BBV2 869 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 BMP2KLQ5H9B9 411 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 DUSP27Q5VZP5 1158 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 HOOK1Q9UJC3 728 aaKnown RBP11.83□□□□□ -0.52
PTPRM-203ENST00000400060 ERC2O15083 957 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
PTPRM-203ENST00000400060 ZNF428Q96B54 188 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 GOLGA6L9A6NEM1 432 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 BCAR3O75815 825 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 C20orf194Q5TEA3 1177 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 PPM1EQ8WY54 764 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 NUP62CLQ9H1M0 184 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 SLU7O95391 586 aaKnown RBP11.83□□□□□ -0.52
PTPRM-203ENST00000400060 TNMDQ9H2S6 317 aa11.83□□□□□ -0.52
PTPRM-203ENST00000400060 ZSCAN12O43309 604 aa11.82□□□□□ -0.52
PTPRM-203ENST00000400060 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
PTPRM-203ENST00000400060 GRIN2BQ13224 1484 aa11.82□□□□□ -0.52
PTPRM-203ENST00000400060 SMC2O95347 1197 aa11.82□□□□□ -0.52
PTPRM-203ENST00000400060 BANK1Q8NDB2 785 aa11.82□□□□□ -0.52
PTPRM-203ENST00000400060 ANKRD20A12PQ8NF67 263 aa11.82□□□□□ -0.52
PTPRM-203ENST00000400060 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
PTPRM-203ENST00000400060 ANKRD50Q9ULJ7 1429 aa11.81□□□□□ -0.52
PTPRM-203ENST00000400060 NF2P35240 595 aa11.81□□□□□ -0.52
PTPRM-203ENST00000400060 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
PTPRM-203ENST00000400060 MAP9Q49MG5 647 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms