RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 MYT1Q01538 1121 aa9.36□□□□□ -0.91
USP16-203ENST00000399975 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
USP16-203ENST00000399975 PXDNQ92626 1479 aa9.36□□□□□ -0.91
USP16-203ENST00000399975 CCER2I3L3R5 266 aa9.36□□□□□ -0.91
USP16-203ENST00000399975 SBNO1A3KN83 1393 aa9.35□□□□□ -0.91
USP16-203ENST00000399975 MED1Q15648 1581 aaPredicted RBP9.35□□□□□ -0.91
USP16-203ENST00000399975 OVOS2A0A0J9YW53 1432 aa9.35□□□□□ -0.91
USP16-203ENST00000399975 OVOS2Q6IE36 1432 aa9.35□□□□□ -0.91
USP16-203ENST00000399975 CRYBG1Q9Y4K1 1723 aa9.35□□□□□ -0.91
USP16-203ENST00000399975 TTC21BQ7Z4L5 1316 aa9.34□□□□□ -0.91
USP16-203ENST00000399975 ROBO1Q9Y6N7 1651 aa9.34□□□□□ -0.91
USP16-203ENST00000399975 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
USP16-203ENST00000399975 PHRF1Q9P1Y6 1649 aaKnown RBP9.33□□□□□ -0.92
USP16-203ENST00000399975 SLIT3O75094 1523 aa9.33□□□□□ -0.92
USP16-203ENST00000399975 SMG6Q86US8 1419 aaKnown RBP9.33□□□□□ -0.92
USP16-203ENST00000399975 FYB1O15117 783 aa9.33□□□□□ -0.92
USP16-203ENST00000399975 ESCO1Q5FWF5 840 aa9.33□□□□□ -0.92
USP16-203ENST00000399975 NGDNQ8NEJ9 315 aaKnown RBP9.33□□□□□ -0.92
USP16-203ENST00000399975 MYBBP1AQ9BQG0 1328 aaKnown RBP9.33□□□□□ -0.92
USP16-203ENST00000399975 AATKQ6ZMQ8 1374 aa9.33□□□□□ -0.92
USP16-203ENST00000399975 ORAI2Q96SN7 254 aa9.33□□□□□ -0.92
USP16-203ENST00000399975 BRINP3Q76B58 766 aa9.32□□□□□ -0.92
USP16-203ENST00000399975 MIER1Q8N108 512 aa9.32□□□□□ -0.92
USP16-203ENST00000399975 NPHP3Q7Z494 1330 aa9.32□□□□□ -0.92
USP16-203ENST00000399975 COL22A1Q8NFW1 1626 aaPredicted RBP9.32□□□□□ -0.92
USP16-203ENST00000399975 PMFBP1Q8TBY8 1022 aa9.32□□□□□ -0.92
USP16-203ENST00000399975 NUTM2FA1L443 756 aa9.31□□□□□ -0.92
USP16-203ENST00000399975 PSME1Q06323 249 aa9.31□□□□□ -0.92
USP16-203ENST00000399975 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
USP16-203ENST00000399975 INSRP06213 1382 aa9.31□□□□□ -0.92
USP16-203ENST00000399975 TNS3Q68CZ2 1445 aa9.3□□□□□ -0.92
USP16-203ENST00000399975 ABCC6O95255 1503 aa9.3□□□□□ -0.92
USP16-203ENST00000399975 ABCA3Q99758 1704 aa9.3□□□□□ -0.92
USP16-203ENST00000399975 MAP2P11137 1827 aaKnown RBP9.3□□□□□ -0.92
USP16-203ENST00000399975 KRT28Q7Z3Y7 464 aa9.3□□□□□ -0.92
USP16-203ENST00000399975 CERKQ8TCT0 537 aa9.3□□□□□ -0.92
USP16-203ENST00000399975 NFAT5O94916 1531 aa9.29□□□□□ -0.92
USP16-203ENST00000399975 CC2D1BQ5T0F9 858 aaKnown RBP9.29□□□□□ -0.92
USP16-203ENST00000399975 USP19O94966 1318 aa9.29□□□□□ -0.92
USP16-203ENST00000399975 KIF24Q5T7B8 1368 aa9.29□□□□□ -0.92
USP16-203ENST00000399975 COL16A1Q07092 1604 aaPredicted RBP9.29□□□□□ -0.92
USP16-203ENST00000399975 PHLPP1O60346 1717 aa9.29□□□□□ -0.92
USP16-203ENST00000399975 ARHGEF10O15013 1369 aa9.29□□□□□ -0.92
USP16-203ENST00000399975 PPP2R1AP30153 589 aa9.29□□□□□ -0.92
USP16-203ENST00000399975 MORC1Q86VD1 984 aa9.29□□□□□ -0.92
USP16-203ENST00000399975 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
USP16-203ENST00000399975 TOM1O60784 492 aa9.28□□□□□ -0.92
USP16-203ENST00000399975 NME9Q86XW9 330 aa9.28□□□□□ -0.92
USP16-203ENST00000399975 SPATA31A3Q5VYP0 1347 aa9.28□□□□□ -0.92
USP16-203ENST00000399975 COG3Q96JB2 828 aa9.28□□□□□ -0.92
USP16-203ENST00000399975 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
USP16-203ENST00000399975 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
USP16-203ENST00000399975 PNPLA6Q8IY17 1366 aa9.28□□□□□ -0.92
USP16-203ENST00000399975 CDK12Q9NYV4 1490 aaPredicted RBP9.27□□□□□ -0.93
USP16-203ENST00000399975 FOXO3O43524 673 aa9.27□□□□□ -0.93
USP16-203ENST00000399975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.27□□□□□ -0.93
USP16-203ENST00000399975 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
USP16-203ENST00000399975 LTN1O94822 1766 aa9.27□□□□□ -0.93
USP16-203ENST00000399975 PEAK1Q9H792 1746 aa9.27□□□□□ -0.93
USP16-203ENST00000399975 RTL1A6NKG5 1358 aa9.26□□□□□ -0.93
USP16-203ENST00000399975 CENPBP07199 599 aaPredicted RBP9.25□□□□□ -0.93
USP16-203ENST00000399975 COL18A1P39060 1754 aa9.25□□□□□ -0.93
USP16-203ENST00000399975 ABTB2Q8N961 1025 aa9.24□□□□□ -0.93
USP16-203ENST00000399975 KCNH5Q8NCM2 988 aa9.24□□□□□ -0.93
USP16-203ENST00000399975 RGPD1P0DJD0 1748 aa9.24□□□□□ -0.93
USP16-203ENST00000399975 ZRANB1Q9UGI0 708 aa9.24□□□□□ -0.93
USP16-203ENST00000399975 CAMTA1Q9Y6Y1 1673 aa9.23□□□□□ -0.93
USP16-203ENST00000399975 CPDO75976 1380 aa9.23□□□□□ -0.93
USP16-203ENST00000399975 NLRP6P59044 892 aa9.23□□□□□ -0.93
USP16-203ENST00000399975 POLKQ9UBT6 870 aa9.23□□□□□ -0.93
USP16-203ENST00000399975 FAM208AQ9UK61 1670 aaKnown RBP9.23□□□□□ -0.93
USP16-203ENST00000399975 LMO7Q8WWI1 1683 aa9.22□□□□□ -0.93
USP16-203ENST00000399975 PAK3O75914 559 aaPredicted RBP9.22□□□□□ -0.93
USP16-203ENST00000399975 PNISRQ8TF01 805 aaKnown RBP9.22□□□□□ -0.93
USP16-203ENST00000399975 LRRC59Q96AG4 307 aaKnown RBP9.22□□□□□ -0.93
USP16-203ENST00000399975 UBAP1LF5GYI3 381 aa9.21□□□□□ -0.93
USP16-203ENST00000399975 MTHFSP49914 203 aa9.21□□□□□ -0.94
USP16-203ENST00000399975 CCDC184Q52MB2 194 aa9.21□□□□□ -0.94
USP16-203ENST00000399975 DDX17Q92841 729 aaKnown RBP9.21□□□□□ -0.94
USP16-203ENST00000399975 CFAP53Q96M91 514 aa9.21□□□□□ -0.94
USP16-203ENST00000399975 FLT4P35916 1363 aa9.21□□□□□ -0.94
USP16-203ENST00000399975 BLMP54132 1417 aaPredicted RBP9.21□□□□□ -0.94
USP16-203ENST00000399975 MRS2Q9HD23 443 aa9.21□□□□□ -0.94
USP16-203ENST00000399975 COL14A1Q05707 1796 aaKnown RBP9.2□□□□□ -0.94
USP16-203ENST00000399975 XPCQ01831 940 aaPredicted RBP9.2□□□□□ -0.94
USP16-203ENST00000399975 GCP02774 474 aa9.2□□□□□ -0.94
USP16-203ENST00000399975 ARHGEF25Q86VW2 580 aa9.2□□□□□ -0.94
USP16-203ENST00000399975 MAP3K19Q56UN5 1328 aa9.19□□□□□ -0.94
USP16-203ENST00000399975 NCAPD2Q15021 1401 aa9.19□□□□□ -0.94
USP16-203ENST00000399975 IP6K1Q92551 441 aa9.18□□□□□ -0.94
USP16-203ENST00000399975 RGPD5Q99666 1765 aa9.18□□□□□ -0.94
USP16-203ENST00000399975 PLEKHG2Q9H7P9 1386 aa9.18□□□□□ -0.94
USP16-203ENST00000399975 IL13P35225 146 aa9.18□□□□□ -0.94
USP16-203ENST00000399975 NCBP3Q53F19 620 aaKnown RBP9.18□□□□□ -0.94
USP16-203ENST00000399975 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
USP16-203ENST00000399975 NWD2Q9ULI1 1742 aa9.17□□□□□ -0.94
USP16-203ENST00000399975 HOXC9P31274 260 aa9.17□□□□□ -0.94
USP16-203ENST00000399975 JCADQ9P266 1359 aa9.17□□□□□ -0.94
USP16-203ENST00000399975 TNNT2P45379 298 aaPredicted RBP9.17□□□□□ -0.94
USP16-203ENST00000399975 DIAPH1O60610 1272 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms