RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ATF3P18847 181 aa14.67□□□□□ -0.06
CACNA1C-219ENST00000399649 MROH2BQ7Z745 1585 aa14.67□□□□□ -0.06
CACNA1C-219ENST00000399649 GOLGA6L7A0A1B0GV03 622 aa14.67□□□□□ -0.06
CACNA1C-219ENST00000399649 CCDC181Q5TID7 509 aa14.67□□□□□ -0.06
CACNA1C-219ENST00000399649 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
CACNA1C-219ENST00000399649 HSP90AB3PQ58FF7 597 aa14.67□□□□□ -0.06
CACNA1C-219ENST00000399649 DACH1Q9UI36 760 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 MIA2Q96PC5 1412 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 KIAA0754O94854 1291 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 AAMPQ13685 434 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 DEF6Q9H4E7 631 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 ATP2B1P20020 1258 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 RABEP1Q15276 862 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 RNF214Q8ND24 703 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 FANCIQ9NVI1 1328 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 HMOX1P09601 288 aa14.66□□□□□ -0.06
CACNA1C-219ENST00000399649 STIM1Q13586 685 aa14.65□□□□□ -0.06
CACNA1C-219ENST00000399649 PTPRGP23470 1445 aa14.65□□□□□ -0.06
CACNA1C-219ENST00000399649 FAM69CQ0P6D2 419 aa14.65□□□□□ -0.06
CACNA1C-219ENST00000399649 DHX8Q14562 1220 aaKnown RBP14.65□□□□□ -0.06
CACNA1C-219ENST00000399649 EZRP15311 586 aaKnown RBP14.65□□□□□ -0.06
CACNA1C-219ENST00000399649 PRKRIP1Q9H875 184 aaPredicted RBP14.65□□□□□ -0.06
CACNA1C-219ENST00000399649 GBP2P32456 591 aaPredicted RBP14.64□□□□□ -0.07
CACNA1C-219ENST00000399649 SERPINC1P01008 464 aa14.64□□□□□ -0.07
CACNA1C-219ENST00000399649 PPFIBP1Q86W92 1011 aa14.64□□□□□ -0.07
CACNA1C-219ENST00000399649 STK38Q15208 465 aa14.64□□□□□ -0.07
CACNA1C-219ENST00000399649 TANGO6Q9C0B7 1094 aa14.64□□□□□ -0.07
CACNA1C-219ENST00000399649 FMNL2Q96PY5 1086 aa14.64□□□□□ -0.07
CACNA1C-219ENST00000399649 MBD3O95983 291 aa14.64□□□□□ -0.07
CACNA1C-219ENST00000399649 CAVIN1Q6NZI2 390 aaKnown RBP14.63□□□□□ -0.07
CACNA1C-219ENST00000399649 CLASRPQ8N2M8 674 aaKnown RBP14.63□□□□□ -0.07
CACNA1C-219ENST00000399649 GNL3LQ9NVN8 582 aaKnown RBP14.63□□□□□ -0.07
CACNA1C-219ENST00000399649 PDCP20941 246 aa14.63□□□□□ -0.07
CACNA1C-219ENST00000399649 CCDC30Q5VVM6 783 aa14.63□□□□□ -0.07
CACNA1C-219ENST00000399649 NLRP2Q9NX02 1062 aa14.63□□□□□ -0.07
CACNA1C-219ENST00000399649 ERC1Q8IUD2 1116 aa14.63□□□□□ -0.07
CACNA1C-219ENST00000399649 DESP17661 470 aa14.63□□□□□ -0.07
CACNA1C-219ENST00000399649 FAM177BA6PVY3 158 aa14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 ATP2B2Q01814 1243 aa14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 CCDC158Q5M9N0 1113 aa14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 NEBLO76041 1014 aa14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 MCM2P49736 904 aa14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 JMYQ8N9B5 988 aa14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 ZHX3Q9H4I2 956 aa14.62□□□□□ -0.07
CACNA1C-219ENST00000399649 CNNM1Q9NRU3 951 aa14.61□□□□□ -0.07
CACNA1C-219ENST00000399649 CEBPZQ03701 1054 aaKnown RBP14.61□□□□□ -0.07
CACNA1C-219ENST00000399649 CCDC69A6NI79 296 aa14.61□□□□□ -0.07
CACNA1C-219ENST00000399649 SPC24Q8NBT2 197 aa14.6□□□□□ -0.07
CACNA1C-219ENST00000399649 GNAI3P08754 354 aa14.6□□□□□ -0.07
CACNA1C-219ENST00000399649 TAX1BP1Q86VP1 789 aa14.6□□□□□ -0.07
CACNA1C-219ENST00000399649 IQCEQ6IPM2 695 aa14.6□□□□□ -0.07
CACNA1C-219ENST00000399649 SEPT11Q9NVA2 429 aaKnown RBP14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 CBFA2T2O43439 604 aa14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 SURF6O75683 361 aaKnown RBP14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 MATR3P43243 847 aaKnown RBP eCLIP14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 SMG6Q86US8 1419 aaKnown RBP14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 TRAK2O60296 914 aa14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 PRPF40AO75400 957 aaKnown RBP14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 ERLIN1O75477 346 aa14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 EIF3JO75822 258 aaKnown RBP14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 NFKBIBQ15653 356 aa14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 SOGA3Q5TF21 947 aa14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 CCDC97Q96F63 343 aaPredicted RBP14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 INCENPQ9NQS7 918 aa14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 AEBP1Q8IUX7 1158 aa14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 PANK1Q8TE04 598 aa14.59□□□□□ -0.07
CACNA1C-219ENST00000399649 MPHOSPH10O00566 681 aaKnown RBP14.58□□□□□ -0.07
CACNA1C-219ENST00000399649 TRIM22Q8IYM9 498 aa14.58□□□□□ -0.07
CACNA1C-219ENST00000399649 WIZO95785 1651 aa14.58□□□□□ -0.08
CACNA1C-219ENST00000399649 CENPHQ9H3R5 247 aa14.58□□□□□ -0.08
CACNA1C-219ENST00000399649 RBM42Q9BTD8 480 aaKnown RBP14.58□□□□□ -0.08
CACNA1C-219ENST00000399649 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.08
CACNA1C-219ENST00000399649 NOL7Q9UMY1 257 aaKnown RBP14.58□□□□□ -0.08
CACNA1C-219ENST00000399649 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
CACNA1C-219ENST00000399649 ANKRD1Q15327 319 aa14.57□□□□□ -0.08
CACNA1C-219ENST00000399649 CCDC57Q2TAC2 916 aa14.57□□□□□ -0.08
CACNA1C-219ENST00000399649 NACAP1Q9BZK3 213 aa14.57□□□□□ -0.08
CACNA1C-219ENST00000399649 NEK4P51957 841 aa14.57□□□□□ -0.08
CACNA1C-219ENST00000399649 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
CACNA1C-219ENST00000399649 TNMDQ9H2S6 317 aa14.57□□□□□ -0.08
CACNA1C-219ENST00000399649 CCDC192P0DO97 292 aa14.57□□□□□ -0.08
CACNA1C-219ENST00000399649 FIBPO43427 364 aa14.56□□□□□ -0.08
CACNA1C-219ENST00000399649 GAS2L2Q8NHY3 880 aa14.56□□□□□ -0.08
CACNA1C-219ENST00000399649 JAKMIP3Q5VZ66 844 aa14.56□□□□□ -0.08
CACNA1C-219ENST00000399649 CCDC112Q8NEF3 446 aa14.56□□□□□ -0.08
CACNA1C-219ENST00000399649 TRIM21P19474 475 aaKnown RBP14.56□□□□□ -0.08
CACNA1C-219ENST00000399649 STK11IPQ8N1F8 1099 aa14.56□□□□□ -0.08
CACNA1C-219ENST00000399649 FAM193AP78312 1265 aa14.56□□□□□ -0.08
CACNA1C-219ENST00000399649 PLEKHO1Q53GL0 409 aaPredicted RBP14.55□□□□□ -0.08
CACNA1C-219ENST00000399649 CYP46A1Q9Y6A2 500 aa14.55□□□□□ -0.08
CACNA1C-219ENST00000399649 STK3Q13188 491 aa14.55□□□□□ -0.08
CACNA1C-219ENST00000399649 RBM5P52756 815 aaKnown RBP eCLIP14.54□□□□□ -0.08
CACNA1C-219ENST00000399649 PPP1R1BQ9UD71 204 aaPredicted RBP14.54□□□□□ -0.08
CACNA1C-219ENST00000399649 GPRASP1Q5JY77 1395 aa14.54□□□□□ -0.08
CACNA1C-219ENST00000399649 GNAI2P04899 355 aa14.54□□□□□ -0.08
CACNA1C-219ENST00000399649 ZSCAN25Q6NSZ9 544 aa14.54□□□□□ -0.08
CACNA1C-219ENST00000399649 CCDC91Q7Z6B0 441 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms