RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
CACNA1C-217ENST00000399641 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
CACNA1C-217ENST00000399641 ZWINTO95229 277 aa13.3□□□□□ -0.28
CACNA1C-217ENST00000399641 OLFM4Q6UX06 510 aa13.3□□□□□ -0.28
CACNA1C-217ENST00000399641 CGNL1Q0VF96 1302 aa13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 CA8P35219 290 aa13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 CCDC113Q9H0I3 377 aa13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 GNL3LQ9NVN8 582 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 SLC3A2P08195 630 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 FMN1Q68DA7 1419 aa13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 ANKRD45Q5TZF3 282 aa13.29□□□□□ -0.28
CACNA1C-217ENST00000399641 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 ERLIN2O94905 339 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 COMMD10Q9Y6G5 202 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 GOLGA6L7A0A1B0GV03 622 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 FMNL2Q96PY5 1086 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 PKNOX2Q96KN3 472 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 BEGAINQ9BUH8 593 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 TANGO6Q9C0B7 1094 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
CACNA1C-217ENST00000399641 MPNDQ8N594 471 aa13.27□□□□□ -0.28
CACNA1C-217ENST00000399641 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.28
CACNA1C-217ENST00000399641 CNNM1Q9NRU3 951 aa13.27□□□□□ -0.28
CACNA1C-217ENST00000399641 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.29
CACNA1C-217ENST00000399641 ZPR1O75312 459 aa13.26□□□□□ -0.29
CACNA1C-217ENST00000399641 SPC24Q8NBT2 197 aa13.26□□□□□ -0.29
CACNA1C-217ENST00000399641 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
CACNA1C-217ENST00000399641 TBC1D2BQ9UPU7 963 aa13.26□□□□□ -0.29
CACNA1C-217ENST00000399641 CLGNO14967 610 aa13.26□□□□□ -0.29
CACNA1C-217ENST00000399641 CCDC175P0C221 793 aa13.26□□□□□ -0.29
CACNA1C-217ENST00000399641 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-217ENST00000399641 MAGEC2Q9UBF1 373 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-217ENST00000399641 IPO4Q8TEX9 1081 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-217ENST00000399641 CRBNQ96SW2 442 aa13.25□□□□□ -0.29
CACNA1C-217ENST00000399641 PLEKHO1Q53GL0 409 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-217ENST00000399641 APBB1IPQ7Z5R6 666 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-217ENST00000399641 CEBPZQ03701 1054 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-217ENST00000399641 ZFP91Q96JP5 570 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-217ENST00000399641 EIF3JO75822 258 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 HSPA5P11021 654 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 TOM1O60784 492 aa13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 RNF214Q8ND24 703 aa13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 BRMS1Q9HCU9 246 aa13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 NBPF8Q3BBV2 869 aa13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-217ENST00000399641 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
CACNA1C-217ENST00000399641 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-217ENST00000399641 SPATA24Q86W54 205 aa13.23□□□□□ -0.29
CACNA1C-217ENST00000399641 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
CACNA1C-217ENST00000399641 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-217ENST00000399641 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-217ENST00000399641 STAMBPO95630 424 aa13.23□□□□□ -0.29
CACNA1C-217ENST00000399641 ANAPC15P60006 121 aa13.23□□□□□ -0.29
CACNA1C-217ENST00000399641 DEF6Q9H4E7 631 aa13.22□□□□□ -0.29
CACNA1C-217ENST00000399641 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
CACNA1C-217ENST00000399641 POLD1P28340 1107 aa13.22□□□□□ -0.29
CACNA1C-217ENST00000399641 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
CACNA1C-217ENST00000399641 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
CACNA1C-217ENST00000399641 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-217ENST00000399641 RALYLQ86SE5 291 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-217ENST00000399641 CCDC66A2RUB6 948 aa13.21□□□□□ -0.29
CACNA1C-217ENST00000399641 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.29
CACNA1C-217ENST00000399641 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
CACNA1C-217ENST00000399641 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.29
CACNA1C-217ENST00000399641 RFX1P22670 979 aa13.21□□□□□ -0.3
CACNA1C-217ENST00000399641 ATP6V1DQ9Y5K8 247 aa13.21□□□□□ -0.3
CACNA1C-217ENST00000399641 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 TIGD1Q96MW7 591 aa13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 LRRFIP2Q9Y608 721 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 MRPS9P82933 396 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 PPM1EQ8WY54 764 aa13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 CCDC91Q7Z6B0 441 aa13.2□□□□□ -0.3
CACNA1C-217ENST00000399641 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-217ENST00000399641 FAM43AQ8N2R8 423 aa13.19□□□□□ -0.3
CACNA1C-217ENST00000399641 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-217ENST00000399641 CCDC73Q6ZRK6 1079 aa13.19□□□□□ -0.3
CACNA1C-217ENST00000399641 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
CACNA1C-217ENST00000399641 XBP1P17861 261 aa13.18□□□□□ -0.3
CACNA1C-217ENST00000399641 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-217ENST00000399641 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
CACNA1C-217ENST00000399641 GSE1Q14687 1217 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 PRDM10Q9NQV6 1147 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 CCDC160A6NGH7 325 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 TTC39AQ5SRH9 613 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 CFAP57Q96MR6 1250 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms