RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 ANKRD50Q9ULJ7 1429 aa16.73■□□□□ 0.27
CACNA1C-211ENST00000399617 ERC2O15083 957 aa16.72■□□□□ 0.27
CACNA1C-211ENST00000399617 ZPR1O75312 459 aa16.72■□□□□ 0.27
CACNA1C-211ENST00000399617 STK3Q13188 491 aa16.72■□□□□ 0.27
CACNA1C-211ENST00000399617 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
CACNA1C-211ENST00000399617 CT47A1Q5JQC4 288 aaPredicted RBP16.72■□□□□ 0.27
CACNA1C-211ENST00000399617 RNF20Q5VTR2 975 aa16.72■□□□□ 0.27
CACNA1C-211ENST00000399617 ADAMTS8Q9UP79 889 aa16.72■□□□□ 0.27
CACNA1C-211ENST00000399617 EXOSC9Q06265 439 aaKnown RBP16.71■□□□□ 0.27
CACNA1C-211ENST00000399617 NUP133Q8WUM0 1156 aa16.71■□□□□ 0.27
CACNA1C-211ENST00000399617 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
CACNA1C-211ENST00000399617 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
CACNA1C-211ENST00000399617 WWC2Q6AWC2 1192 aa16.71■□□□□ 0.27
CACNA1C-211ENST00000399617 GOLGA6L3A6NEY3 463 aa16.71■□□□□ 0.27
CACNA1C-211ENST00000399617 RAI14Q9P0K7 980 aa16.71■□□□□ 0.27
CACNA1C-211ENST00000399617 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.26
CACNA1C-211ENST00000399617 CCDC158Q5M9N0 1113 aa16.7■□□□□ 0.26
CACNA1C-211ENST00000399617 C8orf37Q96NL8 207 aa16.7■□□□□ 0.26
CACNA1C-211ENST00000399617 DDX49Q9Y6V7 483 aaKnown RBP16.7■□□□□ 0.26
CACNA1C-211ENST00000399617 SYNJ2O15056 1496 aa16.7■□□□□ 0.26
CACNA1C-211ENST00000399617 CHRNA2Q15822 529 aa16.7■□□□□ 0.26
CACNA1C-211ENST00000399617 TTLL5Q6EMB2 1281 aa16.69■□□□□ 0.26
CACNA1C-211ENST00000399617 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
CACNA1C-211ENST00000399617 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
CACNA1C-211ENST00000399617 EPS15P42566 896 aa16.69■□□□□ 0.26
CACNA1C-211ENST00000399617 SMC3Q9UQE7 1217 aa16.69■□□□□ 0.26
CACNA1C-211ENST00000399617 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
CACNA1C-211ENST00000399617 TWISTNBQ3B726 338 aaPredicted RBP16.69■□□□□ 0.26
CACNA1C-211ENST00000399617 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
CACNA1C-211ENST00000399617 ODF2Q5BJF6 829 aa16.68■□□□□ 0.26
CACNA1C-211ENST00000399617 TMOD3Q9NYL9 352 aa16.68■□□□□ 0.26
CACNA1C-211ENST00000399617 ANKIB1Q9P2G1 1089 aa16.68■□□□□ 0.26
CACNA1C-211ENST00000399617 USP5P45974 858 aa16.68■□□□□ 0.26
CACNA1C-211ENST00000399617 ZNF622Q969S3 477 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA1C-211ENST00000399617 KRT18P05783 430 aaKnown RBP16.67■□□□□ 0.26
CACNA1C-211ENST00000399617 ABCF2Q9UG63 623 aa16.67■□□□□ 0.26
CACNA1C-211ENST00000399617 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
CACNA1C-211ENST00000399617 HSPA2P54652 639 aa16.67■□□□□ 0.26
CACNA1C-211ENST00000399617 TPM1P09493 284 aa16.67■□□□□ 0.26
CACNA1C-211ENST00000399617 MRC2Q9UBG0 1479 aa16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 DCTN1Q14203 1278 aa16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 TRMT1LQ7Z2T5 733 aaKnown RBP16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 BRMS1Q9HCU9 246 aa16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 MATR3P43243 847 aaKnown RBP eCLIP16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 HSP90AB4PQ58FF6 505 aa16.66■□□□□ 0.26
CACNA1C-211ENST00000399617 CDK5RAP3Q96JB5 506 aa16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 CC2D2AQ9P2K1 1620 aa16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 KIF7Q2M1P5 1343 aa16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 CLASRPQ8N2M8 674 aaKnown RBP16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 GPTP24298 496 aa16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 SKIDA1Q1XH10 827 aa16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 CNTROBQ8N137 903 aa16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
CACNA1C-211ENST00000399617 REC8O95072 547 aa16.64■□□□□ 0.26
CACNA1C-211ENST00000399617 ERBINQ96RT1 1412 aa16.64■□□□□ 0.26
CACNA1C-211ENST00000399617 GOLGA6L1Q8N7Z2 621 aa16.64■□□□□ 0.25
CACNA1C-211ENST00000399617 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
CACNA1C-211ENST00000399617 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
CACNA1C-211ENST00000399617 CLEC11AQ9Y240 323 aa16.64■□□□□ 0.25
CACNA1C-211ENST00000399617 BCAR3O75815 825 aa16.63■□□□□ 0.25
CACNA1C-211ENST00000399617 PTMSP20962 102 aa16.63■□□□□ 0.25
CACNA1C-211ENST00000399617 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
CACNA1C-211ENST00000399617 MCM10Q7L590 875 aa16.63■□□□□ 0.25
CACNA1C-211ENST00000399617 LRP2BPQ9P2M1 347 aa16.63■□□□□ 0.25
CACNA1C-211ENST00000399617 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
CACNA1C-211ENST00000399617 SART3Q15020 963 aaKnown RBP16.62■□□□□ 0.25
CACNA1C-211ENST00000399617 INTS3Q68E01 1043 aaKnown RBP16.62■□□□□ 0.25
CACNA1C-211ENST00000399617 PDILTQ8N807 584 aa16.62■□□□□ 0.25
CACNA1C-211ENST00000399617 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
CACNA1C-211ENST00000399617 PPM1FP49593 454 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-211ENST00000399617 JARID2Q92833 1246 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-211ENST00000399617 AMOTL2Q9Y2J4 779 aa16.62■□□□□ 0.25
CACNA1C-211ENST00000399617 IDH1O75874 414 aaKnown RBP16.61■□□□□ 0.25
CACNA1C-211ENST00000399617 NCOA2Q15596 1464 aa16.61■□□□□ 0.25
CACNA1C-211ENST00000399617 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
CACNA1C-211ENST00000399617 AK7Q96M32 723 aa16.61■□□□□ 0.25
CACNA1C-211ENST00000399617 PDE4AP27815 886 aa16.61■□□□□ 0.25
CACNA1C-211ENST00000399617 IGHMBP2P38935 993 aaKnown RBP16.61■□□□□ 0.25
CACNA1C-211ENST00000399617 CNTLNQ9NXG0 1405 aa16.6■□□□□ 0.25
CACNA1C-211ENST00000399617 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
CACNA1C-211ENST00000399617 WDR70Q9NW82 654 aa16.6■□□□□ 0.25
CACNA1C-211ENST00000399617 PPP2R1AP30153 589 aa16.6■□□□□ 0.25
CACNA1C-211ENST00000399617 CFTRP13569 1480 aa16.6■□□□□ 0.25
CACNA1C-211ENST00000399617 ANKRD20A12PQ8NF67 263 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 RPGRQ92834 1020 aaKnown RBP16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 MYD88Q99836 296 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 IL1RAPL2Q9NP60 686 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 STARD3NLO95772 234 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 SSBP05455 408 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 TDO2P48775 406 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 FYCO1Q9BQS8 1478 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 XBP1P17861 261 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 HSP90AB2PQ58FF8 381 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 AACSQ86V21 672 aa16.59■□□□□ 0.25
CACNA1C-211ENST00000399617 KRT28Q7Z3Y7 464 aa16.58■□□□□ 0.25
CACNA1C-211ENST00000399617 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms