RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 RALGAPBQ86X10 1494 aa30.7■■■□□ 2.51
RUNX1-204ENST00000399237 TONSLQ96HA7 1378 aa30.7■■■□□ 2.51
RUNX1-204ENST00000399237 UNC5CLQ8IV45 518 aa30.7■■■□□ 2.51
RUNX1-204ENST00000399237 CABP2Q9NPB3 220 aa30.69■■■□□ 2.5
RUNX1-204ENST00000399237 CCDC61Q9Y6R9 512 aa30.67■■■□□ 2.5
RUNX1-204ENST00000399237 ACEP12821 1306 aa30.67■■■□□ 2.5
RUNX1-204ENST00000399237 PHRF1Q9P1Y6 1649 aaKnown RBP30.66■■■□□ 2.5
RUNX1-204ENST00000399237 PPIP5K1Q6PFW1 1433 aa30.65■■■□□ 2.5
RUNX1-204ENST00000399237 PLEKHG3A1L390 1219 aa30.65■■■□□ 2.5
RUNX1-204ENST00000399237 NWD2Q9ULI1 1742 aa30.64■■■□□ 2.5
RUNX1-204ENST00000399237 GLI3P10071 1580 aa30.64■■■□□ 2.5
RUNX1-204ENST00000399237 SRPK2P78362 688 aaKnown RBP30.64■■■□□ 2.5
RUNX1-204ENST00000399237 NRAPQ86VF7 1730 aa30.63■■■□□ 2.49
RUNX1-204ENST00000399237 PAK3O75914 559 aaPredicted RBP30.6■■■□□ 2.49
RUNX1-204ENST00000399237 EP400Q96L91 3159 aa30.6■■■□□ 2.49
RUNX1-204ENST00000399237 COL14A1Q05707 1796 aaKnown RBP30.56■■■□□ 2.48
RUNX1-204ENST00000399237 FAM83GA6ND36 823 aa30.56■■■□□ 2.48
RUNX1-204ENST00000399237 CARD11Q9BXL7 1154 aa30.56■■■□□ 2.48
RUNX1-204ENST00000399237 NRKQ7Z2Y5 1582 aa30.54■■■□□ 2.48
RUNX1-204ENST00000399237 EVC2Q86UK5 1308 aa30.54■■■□□ 2.48
RUNX1-204ENST00000399237 VPS72Q15906 364 aa30.54■■■□□ 2.48
RUNX1-204ENST00000399237 CABP1Q9NZU7 370 aa30.54■■■□□ 2.48
RUNX1-204ENST00000399237 AKAP12Q02952 1782 aa30.54■■■□□ 2.48
RUNX1-204ENST00000399237 NUTM2GQ5VZR2 741 aa30.53■■■□□ 2.48
RUNX1-204ENST00000399237 CCDC9Q9Y3X0 531 aaKnown RBP30.53■■■□□ 2.48
RUNX1-204ENST00000399237 SBNO2Q9Y2G9 1366 aa30.53■■■□□ 2.48
RUNX1-204ENST00000399237 USP6P35125 1406 aa30.51■■■□□ 2.47
RUNX1-204ENST00000399237 PCGF6Q9BYE7 350 aa30.51■■■□□ 2.47
RUNX1-204ENST00000399237 PIK3C2AO00443 1686 aa30.49■■■□□ 2.47
RUNX1-204ENST00000399237 SSH2Q76I76 1423 aa30.49■■■□□ 2.47
RUNX1-204ENST00000399237 SEPT12Q8IYM1 358 aa30.49■■■□□ 2.47
RUNX1-204ENST00000399237 BRWD3Q6RI45 1802 aa30.49■■■□□ 2.47
RUNX1-204ENST00000399237 CCDC125Q86Z20 511 aa30.48■■■□□ 2.47
RUNX1-204ENST00000399237 USP19O94966 1318 aa30.46■■■□□ 2.47
RUNX1-204ENST00000399237 KIAA0232Q92628 1395 aa30.45■■■□□ 2.47
RUNX1-204ENST00000399237 BTG4Q9NY30 223 aa30.45■■■□□ 2.47
RUNX1-204ENST00000399237 MON2Q7Z3U7 1717 aa30.43■■■□□ 2.46
RUNX1-204ENST00000399237 ABTB2Q8N961 1025 aa30.43■■■□□ 2.46
RUNX1-204ENST00000399237 BLMP54132 1417 aaPredicted RBP30.42■■■□□ 2.46
RUNX1-204ENST00000399237 LMO7Q8WWI1 1683 aa30.42■■■□□ 2.46
RUNX1-204ENST00000399237 CPSF1Q10570 1443 aaKnown RBP30.41■■■□□ 2.46
RUNX1-204ENST00000399237 ONECUT3O60422 494 aaPredicted RBP30.41■■■□□ 2.46
RUNX1-204ENST00000399237 CD163L1Q9NR16 1453 aa30.41■■■□□ 2.46
RUNX1-204ENST00000399237 SRCAPQ6ZRS2 3230 aa30.41■■■□□ 2.46
RUNX1-204ENST00000399237 BRD4O60885 1362 aaPredicted RBP30.41■■■□□ 2.46
RUNX1-204ENST00000399237 A0A0G2JS52 829 aa30.4■■■□□ 2.46
RUNX1-204ENST00000399237 MYT1Q01538 1121 aa30.4■■■□□ 2.46
RUNX1-204ENST00000399237 CHRNA2Q15822 529 aa30.4■■■□□ 2.46
RUNX1-204ENST00000399237 SLIT3O75094 1523 aa30.4■■■□□ 2.46
RUNX1-204ENST00000399237 ZC3H6P61129 1189 aaKnown RBP30.39■■■□□ 2.46
RUNX1-204ENST00000399237 PRDM11Q9NQV5 511 aa30.39■■■□□ 2.46
RUNX1-204ENST00000399237 ZRANB1Q9UGI0 708 aa30.39■■■□□ 2.46
RUNX1-204ENST00000399237 KRT27Q7Z3Y8 459 aa30.38■■■□□ 2.45
RUNX1-204ENST00000399237 FAM98CQ17RN3 349 aaKnown RBP30.37■■■□□ 2.45
RUNX1-204ENST00000399237 TESK2Q96S53 571 aa30.37■■■□□ 2.45
RUNX1-204ENST00000399237 CAMTA1Q9Y6Y1 1673 aa30.35■■■□□ 2.45
RUNX1-204ENST00000399237 ST20-MTHFSA0A0A6YYL1 179 aa30.34■■■□□ 2.45
RUNX1-204ENST00000399237 CPDO75976 1380 aa30.33■■■□□ 2.45
RUNX1-204ENST00000399237 CLSPNQ9HAW4 1339 aa30.33■■■□□ 2.45
RUNX1-204ENST00000399237 DEFB132Q7Z7B7 95 aa30.33■■■□□ 2.45
RUNX1-204ENST00000399237 TTC21BQ7Z4L5 1316 aa30.32■■■□□ 2.44
RUNX1-204ENST00000399237 SF3B2Q13435 895 aaKnown RBP30.32■■■□□ 2.44
RUNX1-204ENST00000399237 NLRP13Q86W25 1043 aa30.32■■■□□ 2.44
RUNX1-204ENST00000399237 THSD7AQ9UPZ6 1657 aa30.32■■■□□ 2.44
RUNX1-204ENST00000399237 GCP02774 474 aa30.31■■■□□ 2.44
RUNX1-204ENST00000399237 SPATA31A5Q5VU36 1347 aa30.3■■■□□ 2.44
RUNX1-204ENST00000399237 SPATA31A7Q8IWB4 1347 aa30.3■■■□□ 2.44
RUNX1-204ENST00000399237 COL18A1P39060 1754 aa30.3■■■□□ 2.44
RUNX1-204ENST00000399237 KTN1Q86UP2 1357 aaKnown RBP30.29■■■□□ 2.44
RUNX1-204ENST00000399237 NLRP6P59044 892 aa30.29■■■□□ 2.44
RUNX1-204ENST00000399237 USP47Q96K76 1375 aa30.28■■■□□ 2.44
RUNX1-204ENST00000399237 USP54Q70EL1 1684 aa30.28■■■□□ 2.44
RUNX1-204ENST00000399237 ZNF692Q9BU19 519 aaPredicted RBP30.28■■■□□ 2.44
RUNX1-204ENST00000399237 SLC12A5Q9H2X9 1139 aa30.26■■■□□ 2.43
RUNX1-204ENST00000399237 NFAT5O94916 1531 aa30.24■■■□□ 2.43
RUNX1-204ENST00000399237 STRN4Q9NRL3 753 aa30.24■■■□□ 2.43
RUNX1-204ENST00000399237 A0A1W2PP64 1363 aa30.23■■■□□ 2.43
RUNX1-204ENST00000399237 SPATA31A1Q5TZJ5 1347 aa30.22■■■□□ 2.43
RUNX1-204ENST00000399237 TTC21AQ8NDW8 1320 aa30.22■■■□□ 2.43
RUNX1-204ENST00000399237 TMC1Q8TDI8 760 aa30.22■■■□□ 2.43
RUNX1-204ENST00000399237 TIMELESSQ9UNS1 1208 aa30.22■■■□□ 2.43
RUNX1-204ENST00000399237 COL5A2P05997 1499 aaPredicted RBP30.22■■■□□ 2.43
RUNX1-204ENST00000399237 RGPD5Q99666 1765 aa30.21■■■□□ 2.43
RUNX1-204ENST00000399237 FAM182BQ5T319 152 aa30.21■■■□□ 2.43
RUNX1-204ENST00000399237 PUS7Q96PZ0 661 aaKnown RBP30.2■■■□□ 2.43
RUNX1-204ENST00000399237 LARP1Q6PKG0 1096 aaKnown RBP30.18■■■□□ 2.42
RUNX1-204ENST00000399237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.18■■■□□ 2.42
RUNX1-204ENST00000399237 NME9Q86XW9 330 aa30.17■■■□□ 2.42
RUNX1-204ENST00000399237 AATKQ6ZMQ8 1374 aa30.16■■■□□ 2.42
RUNX1-204ENST00000399237 USP31Q70CQ4 1352 aa30.16■■■□□ 2.42
RUNX1-204ENST00000399237 EDC4Q6P2E9 1401 aaKnown RBP30.16■■■□□ 2.42
RUNX1-204ENST00000399237 ZBTB7CA1YPR0 619 aa30.16■■■□□ 2.42
RUNX1-204ENST00000399237 BAG6P46379 1132 aa30.16■■■□□ 2.42
RUNX1-204ENST00000399237 CCER1Q8TC90 406 aaPredicted RBP30.15■■■□□ 2.42
RUNX1-204ENST00000399237 USP35Q9P2H5 1018 aa30.15■■■□□ 2.42
RUNX1-204ENST00000399237 MYOM1P52179 1685 aa30.14■■■□□ 2.42
RUNX1-204ENST00000399237 SOX12O15370 315 aa30.14■■■□□ 2.42
RUNX1-204ENST00000399237 AXIN2Q9Y2T1 843 aa30.13■■■□□ 2.41
RUNX1-204ENST00000399237 EVA1CP58658 441 aa30.12■■■□□ 2.41
RUNX1-204ENST00000399237 HDGFL2Q7Z4V5 671 aaPredicted RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms