RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 GGT6Q6P531 493 aa17.12■□□□□ 0.33
SEC24B-202ENST00000399100 TCP11L2Q8N4U5 519 aa17.12■□□□□ 0.33
SEC24B-202ENST00000399100 FYB1O15117 783 aa17.11■□□□□ 0.33
SEC24B-202ENST00000399100 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
SEC24B-202ENST00000399100 ANP32AP39687 249 aaKnown RBP17.11■□□□□ 0.33
SEC24B-202ENST00000399100 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
SEC24B-202ENST00000399100 RLBP1P12271 317 aa17.1■□□□□ 0.33
SEC24B-202ENST00000399100 CT47B1P0C2W7 299 aaPredicted RBP17.1■□□□□ 0.33
SEC24B-202ENST00000399100 AATKQ6ZMQ8 1374 aa17.1■□□□□ 0.33
SEC24B-202ENST00000399100 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
SEC24B-202ENST00000399100 RIMS2Q9UQ26 1411 aa17.08■□□□□ 0.33
SEC24B-202ENST00000399100 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
SEC24B-202ENST00000399100 NPM1P06748 294 aaKnown RBP eCLIP17.08■□□□□ 0.32
SEC24B-202ENST00000399100 MORC1Q86VD1 984 aa17.08■□□□□ 0.32
SEC24B-202ENST00000399100 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.08■□□□□ 0.32
SEC24B-202ENST00000399100 SIRT1Q96EB6 747 aa17.08■□□□□ 0.32
SEC24B-202ENST00000399100 SLIT1O75093 1534 aa17.07■□□□□ 0.32
SEC24B-202ENST00000399100 RGPD8O14715 1765 aaPredicted RBP17.07■□□□□ 0.32
SEC24B-202ENST00000399100 EDC4Q6P2E9 1401 aaKnown RBP17.07■□□□□ 0.32
SEC24B-202ENST00000399100 CLUAP1Q96AJ1 413 aa17.06■□□□□ 0.32
SEC24B-202ENST00000399100 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
SEC24B-202ENST00000399100 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
SEC24B-202ENST00000399100 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
SEC24B-202ENST00000399100 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
SEC24B-202ENST00000399100 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
SEC24B-202ENST00000399100 PCDHB15Q9Y5E8 787 aa17.05■□□□□ 0.32
SEC24B-202ENST00000399100 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
SEC24B-202ENST00000399100 PIK3C2AO00443 1686 aa17.03■□□□□ 0.32
SEC24B-202ENST00000399100 PHRF1Q9P1Y6 1649 aaKnown RBP17.03■□□□□ 0.32
SEC24B-202ENST00000399100 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
SEC24B-202ENST00000399100 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
SEC24B-202ENST00000399100 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.32
SEC24B-202ENST00000399100 METP08581 1390 aa17.02■□□□□ 0.31
SEC24B-202ENST00000399100 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
SEC24B-202ENST00000399100 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
SEC24B-202ENST00000399100 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
SEC24B-202ENST00000399100 RSPH6AQ9H0K4 717 aa17■□□□□ 0.31
SEC24B-202ENST00000399100 DEKP35659 375 aaKnown RBP17■□□□□ 0.31
SEC24B-202ENST00000399100 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
SEC24B-202ENST00000399100 PANK1Q8TE04 598 aa17■□□□□ 0.31
SEC24B-202ENST00000399100 PRAM1Q96QH2 718 aa16.99■□□□□ 0.31
SEC24B-202ENST00000399100 ZNF853P0CG23 659 aa16.99■□□□□ 0.31
SEC24B-202ENST00000399100 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
SEC24B-202ENST00000399100 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
SEC24B-202ENST00000399100 NCOA3Q9Y6Q9 1424 aa16.97■□□□□ 0.31
SEC24B-202ENST00000399100 SEC24BO95487 1268 aa16.97■□□□□ 0.31
SEC24B-202ENST00000399100 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
SEC24B-202ENST00000399100 RGS12O14924 1447 aa16.97■□□□□ 0.31
SEC24B-202ENST00000399100 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
SEC24B-202ENST00000399100 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
SEC24B-202ENST00000399100 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.3
SEC24B-202ENST00000399100 ZNF142P52746 1687 aaPredicted RBP16.95■□□□□ 0.3
SEC24B-202ENST00000399100 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
SEC24B-202ENST00000399100 POLKQ9UBT6 870 aa16.95■□□□□ 0.3
SEC24B-202ENST00000399100 FER1L4A9Z1Z3 1794 aa16.95■□□□□ 0.3
SEC24B-202ENST00000399100 USP31Q70CQ4 1352 aa16.94■□□□□ 0.3
SEC24B-202ENST00000399100 NUTM2DQ5VT03 806 aaPredicted RBP16.94■□□□□ 0.3
SEC24B-202ENST00000399100 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
SEC24B-202ENST00000399100 COG6Q9Y2V7 657 aa16.93■□□□□ 0.3
SEC24B-202ENST00000399100 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
SEC24B-202ENST00000399100 CAMTA1Q9Y6Y1 1673 aa16.93■□□□□ 0.3
SEC24B-202ENST00000399100 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
SEC24B-202ENST00000399100 IL13P35225 146 aa16.93■□□□□ 0.3
SEC24B-202ENST00000399100 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
SEC24B-202ENST00000399100 CFAP53Q96M91 514 aa16.92■□□□□ 0.3
SEC24B-202ENST00000399100 CHD2O14647 1828 aaKnown RBP16.91■□□□□ 0.3
SEC24B-202ENST00000399100 TRIM27P14373 513 aa16.91■□□□□ 0.3
SEC24B-202ENST00000399100 SMC5Q8IY18 1101 aa16.91■□□□□ 0.3
SEC24B-202ENST00000399100 FCHSD2O94868 740 aa16.91■□□□□ 0.3
SEC24B-202ENST00000399100 ALDH1L2Q3SY69 923 aa16.91■□□□□ 0.3
SEC24B-202ENST00000399100 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
SEC24B-202ENST00000399100 ZBTB40Q9NUA8 1239 aa16.91■□□□□ 0.3
SEC24B-202ENST00000399100 MED1Q15648 1581 aaPredicted RBP16.91■□□□□ 0.3
SEC24B-202ENST00000399100 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
SEC24B-202ENST00000399100 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
SEC24B-202ENST00000399100 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
SEC24B-202ENST00000399100 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
SEC24B-202ENST00000399100 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.29
SEC24B-202ENST00000399100 TBC1D32Q96NH3 1257 aa16.89■□□□□ 0.29
SEC24B-202ENST00000399100 PRR36Q9H6K5 1346 aa16.89■□□□□ 0.29
SEC24B-202ENST00000399100 SSH1Q8WYL5 1049 aa16.88■□□□□ 0.29
SEC24B-202ENST00000399100 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
SEC24B-202ENST00000399100 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
SEC24B-202ENST00000399100 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
SEC24B-202ENST00000399100 ADAMTS7Q9UKP4 1686 aa16.88■□□□□ 0.29
SEC24B-202ENST00000399100 DDIT3P35638 169 aa16.88■□□□□ 0.29
SEC24B-202ENST00000399100 KDM3BQ7LBC6 1761 aa16.88■□□□□ 0.29
SEC24B-202ENST00000399100 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
SEC24B-202ENST00000399100 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
SEC24B-202ENST00000399100 SIPA1L3O60292 1781 aaPredicted RBP16.87■□□□□ 0.29
SEC24B-202ENST00000399100 ABCC4O15439 1325 aa16.86■□□□□ 0.29
SEC24B-202ENST00000399100 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
SEC24B-202ENST00000399100 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
SEC24B-202ENST00000399100 LTN1O94822 1766 aa16.86■□□□□ 0.29
SEC24B-202ENST00000399100 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
SEC24B-202ENST00000399100 MLECQ14165 292 aa16.86■□□□□ 0.29
SEC24B-202ENST00000399100 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
SEC24B-202ENST00000399100 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
SEC24B-202ENST00000399100 PDZRN3Q9UPQ7 1066 aa16.85■□□□□ 0.29
SEC24B-202ENST00000399100 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms