RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 BCAR3O75815 825 aa11.45□□□□□ -0.58
GIN1-201ENST00000399004 FAM135BQ49AJ0 1406 aa11.45□□□□□ -0.58
GIN1-201ENST00000399004 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
GIN1-201ENST00000399004 LRRC37A3O60309 1634 aa11.45□□□□□ -0.58
GIN1-201ENST00000399004 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
GIN1-201ENST00000399004 E9PSI1 815 aa11.44□□□□□ -0.58
GIN1-201ENST00000399004 ATAD2Q6PL18 1390 aa11.43□□□□□ -0.58
GIN1-201ENST00000399004 WDR63Q8IWG1 891 aa11.43□□□□□ -0.58
GIN1-201ENST00000399004 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
GIN1-201ENST00000399004 SIRT1Q96EB6 747 aa11.43□□□□□ -0.58
GIN1-201ENST00000399004 COG6Q9Y2V7 657 aa11.43□□□□□ -0.58
GIN1-201ENST00000399004 CGNL1Q0VF96 1302 aa11.42□□□□□ -0.58
GIN1-201ENST00000399004 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.42□□□□□ -0.58
GIN1-201ENST00000399004 PDE3AQ14432 1141 aa11.42□□□□□ -0.58
GIN1-201ENST00000399004 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
GIN1-201ENST00000399004 CENPQQ7L2Z9 268 aaPredicted RBP11.42□□□□□ -0.58
GIN1-201ENST00000399004 NAP1L5Q96NT1 182 aaPredicted RBP11.42□□□□□ -0.58
GIN1-201ENST00000399004 TUBGCP6Q96RT7 1819 aa11.42□□□□□ -0.58
GIN1-201ENST00000399004 PANK1Q8TE04 598 aa11.42□□□□□ -0.58
GIN1-201ENST00000399004 PHRF1Q9P1Y6 1649 aaKnown RBP11.42□□□□□ -0.58
GIN1-201ENST00000399004 CDK12Q9NYV4 1490 aaPredicted RBP11.41□□□□□ -0.58
GIN1-201ENST00000399004 APAF1O14727 1248 aa11.41□□□□□ -0.58
GIN1-201ENST00000399004 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
GIN1-201ENST00000399004 USP35Q9P2H5 1018 aa11.41□□□□□ -0.58
GIN1-201ENST00000399004 A0A1W2PP64 1363 aa11.41□□□□□ -0.58
GIN1-201ENST00000399004 SLIT1O75093 1534 aa11.41□□□□□ -0.58
GIN1-201ENST00000399004 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
GIN1-201ENST00000399004 CT47B1P0C2W7 299 aaPredicted RBP11.41□□□□□ -0.58
GIN1-201ENST00000399004 PLEKHF1Q96S99 279 aa11.41□□□□□ -0.58
GIN1-201ENST00000399004 SEC24BO95487 1268 aa11.4□□□□□ -0.58
GIN1-201ENST00000399004 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
GIN1-201ENST00000399004 TSPOAP1O95153 1857 aa11.4□□□□□ -0.58
GIN1-201ENST00000399004 IL16Q14005 1332 aa11.4□□□□□ -0.58
GIN1-201ENST00000399004 EVC2Q86UK5 1308 aa11.39□□□□□ -0.59
GIN1-201ENST00000399004 ADAMTSL3P82987 1691 aa11.39□□□□□ -0.59
GIN1-201ENST00000399004 ARID3AQ99856 593 aa11.39□□□□□ -0.59
GIN1-201ENST00000399004 ARHGAP23Q9P227 1491 aa11.39□□□□□ -0.59
GIN1-201ENST00000399004 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
GIN1-201ENST00000399004 PEAK1Q9H792 1746 aa11.38□□□□□ -0.59
GIN1-201ENST00000399004 ZNF142P52746 1687 aaPredicted RBP11.38□□□□□ -0.59
GIN1-201ENST00000399004 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
GIN1-201ENST00000399004 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
GIN1-201ENST00000399004 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
GIN1-201ENST00000399004 RUNDC1Q96C34 613 aa11.37□□□□□ -0.59
GIN1-201ENST00000399004 PIK3R4Q99570 1358 aa11.37□□□□□ -0.59
GIN1-201ENST00000399004 ZBTB7CA1YPR0 619 aa11.37□□□□□ -0.59
GIN1-201ENST00000399004 C8orf34Q49A92 452 aa11.37□□□□□ -0.59
GIN1-201ENST00000399004 CHGAP10645 457 aaKnown RBP11.36□□□□□ -0.59
GIN1-201ENST00000399004 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.36□□□□□ -0.59
GIN1-201ENST00000399004 TNNQ9UQP3 1299 aa11.36□□□□□ -0.59
GIN1-201ENST00000399004 IGHDP01880 384 aa11.35□□□□□ -0.59
GIN1-201ENST00000399004 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
GIN1-201ENST00000399004 IDI1Q13907 227 aa11.35□□□□□ -0.59
GIN1-201ENST00000399004 DMRT2Q9Y5R5 561 aa11.35□□□□□ -0.59
GIN1-201ENST00000399004 EDC4Q6P2E9 1401 aaKnown RBP11.34□□□□□ -0.59
GIN1-201ENST00000399004 SSH2Q76I76 1423 aa11.34□□□□□ -0.59
GIN1-201ENST00000399004 MFAP1P55081 439 aaKnown RBP11.33□□□□□ -0.59
GIN1-201ENST00000399004 PANK2Q9BZ23 570 aa11.33□□□□□ -0.59
GIN1-201ENST00000399004 RIMS2Q9UQ26 1411 aa11.33□□□□□ -0.6
GIN1-201ENST00000399004 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
GIN1-201ENST00000399004 USP19O94966 1318 aa11.31□□□□□ -0.6
GIN1-201ENST00000399004 PTCH1Q13635 1447 aa11.31□□□□□ -0.6
GIN1-201ENST00000399004 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
GIN1-201ENST00000399004 UPF2Q9HAU5 1272 aaKnown RBP11.31□□□□□ -0.6
GIN1-201ENST00000399004 PIK3C2AO00443 1686 aa11.31□□□□□ -0.6
GIN1-201ENST00000399004 RAPGEF3O95398 923 aa11.31□□□□□ -0.6
GIN1-201ENST00000399004 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
GIN1-201ENST00000399004 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
GIN1-201ENST00000399004 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
GIN1-201ENST00000399004 ADAMTS13Q76LX8 1427 aa11.31□□□□□ -0.6
GIN1-201ENST00000399004 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
GIN1-201ENST00000399004 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
GIN1-201ENST00000399004 FBXO41Q8TF61 875 aa11.3□□□□□ -0.6
GIN1-201ENST00000399004 SAFB2Q14151 953 aaKnown RBP eCLIP11.3□□□□□ -0.6
GIN1-201ENST00000399004 RRAGDQ9NQL2 400 aaPredicted RBP11.3□□□□□ -0.6
GIN1-201ENST00000399004 BECN1Q14457 450 aa11.3□□□□□ -0.6
GIN1-201ENST00000399004 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
GIN1-201ENST00000399004 LMTK3Q96Q04 1460 aa11.29□□□□□ -0.6
GIN1-201ENST00000399004 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
GIN1-201ENST00000399004 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
GIN1-201ENST00000399004 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
GIN1-201ENST00000399004 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
GIN1-201ENST00000399004 NUTM2DQ5VT03 806 aaPredicted RBP11.28□□□□□ -0.6
GIN1-201ENST00000399004 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
GIN1-201ENST00000399004 ADAMTS7Q9UKP4 1686 aa11.28□□□□□ -0.6
GIN1-201ENST00000399004 CYB5RLQ6IPT4 315 aa11.28□□□□□ -0.6
GIN1-201ENST00000399004 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
GIN1-201ENST00000399004 CHD2O14647 1828 aaKnown RBP11.27□□□□□ -0.6
GIN1-201ENST00000399004 TRAK1Q9UPV9 953 aa11.27□□□□□ -0.61
GIN1-201ENST00000399004 FYB1O15117 783 aa11.26□□□□□ -0.61
GIN1-201ENST00000399004 MORC1Q86VD1 984 aa11.26□□□□□ -0.61
GIN1-201ENST00000399004 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
GIN1-201ENST00000399004 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
GIN1-201ENST00000399004 MED1Q15648 1581 aaPredicted RBP11.26□□□□□ -0.61
GIN1-201ENST00000399004 PLEKHG1Q9ULL1 1385 aa11.26□□□□□ -0.61
GIN1-201ENST00000399004 MAPK8IP3Q9UPT6 1336 aa11.26□□□□□ -0.61
GIN1-201ENST00000399004 TCP11L2Q8N4U5 519 aa11.26□□□□□ -0.61
GIN1-201ENST00000399004 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
GIN1-201ENST00000399004 MTHFSP49914 203 aa11.25□□□□□ -0.61
GIN1-201ENST00000399004 TMEM132EQ6IEE7 984 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms