RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 IFT57Q9NWB7 429 aa10.02□□□□□ -0.81
SPTLC3-201ENST00000399002 HMGB2P26583 209 aaKnown RBP10.02□□□□□ -0.81
SPTLC3-201ENST00000399002 FILIP1LQ4L180 1135 aa10.02□□□□□ -0.81
SPTLC3-201ENST00000399002 CCDC43Q96MW1 224 aaKnown RBP10.02□□□□□ -0.81
SPTLC3-201ENST00000399002 NFKBIBQ15653 356 aa10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 ZNF692Q9BU19 519 aaPredicted RBP10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 PRXQ9BXM0 1461 aa10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 KIF6Q6ZMV9 814 aa10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 CIZ1Q9ULV3 898 aaPredicted RBP10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 GNAI2P04899 355 aa10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 TXLNAP40222 546 aa10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 CLASRPQ8N2M8 674 aaKnown RBP10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 JMYQ8N9B5 988 aa10.01□□□□□ -0.81
SPTLC3-201ENST00000399002 RBM33Q96EV2 1170 aaKnown RBP10□□□□□ -0.81
SPTLC3-201ENST00000399002 ATAD2Q6PL18 1390 aa10□□□□□ -0.81
SPTLC3-201ENST00000399002 EPS15P42566 896 aa10□□□□□ -0.81
SPTLC3-201ENST00000399002 IL27Q8NEV9 243 aa10□□□□□ -0.81
SPTLC3-201ENST00000399002 DDX24Q9GZR7 859 aaKnown RBP eCLIP10□□□□□ -0.81
SPTLC3-201ENST00000399002 ZSCAN25Q6NSZ9 544 aa10□□□□□ -0.81
SPTLC3-201ENST00000399002 ATF3P18847 181 aa10□□□□□ -0.81
SPTLC3-201ENST00000399002 FSD1Q9BTV5 496 aa10□□□□□ -0.81
SPTLC3-201ENST00000399002 ANKRD30BQ9BXX2 1392 aa9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 CCDC66A2RUB6 948 aa9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 LNPKQ9C0E8 428 aa9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 MAGEC2Q9UBF1 373 aaPredicted RBP9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 CBFA2T2O43439 604 aa9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 KIF14Q15058 1648 aa9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 KINO60870 393 aaKnown RBP9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 AEBP2Q6ZN18 517 aaPredicted RBP9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 ZSCAN31Q96LW9 406 aaPredicted RBP9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 CC2D2AQ9P2K1 1620 aa9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 TRAK2O60296 914 aa9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
SPTLC3-201ENST00000399002 WDR33Q9C0J8 1336 aaKnown RBP9.98□□□□□ -0.81
SPTLC3-201ENST00000399002 PLEKHH1Q9ULM0 1364 aa9.98□□□□□ -0.81
SPTLC3-201ENST00000399002 NCBP3Q53F19 620 aaKnown RBP9.98□□□□□ -0.81
SPTLC3-201ENST00000399002 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
SPTLC3-201ENST00000399002 LUC7LQ9NQ29 371 aaKnown RBP9.98□□□□□ -0.81
SPTLC3-201ENST00000399002 GNL3LQ9NVN8 582 aaKnown RBP9.98□□□□□ -0.81
SPTLC3-201ENST00000399002 RRP12Q5JTH9 1297 aaKnown RBP9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 PANK1Q8TE04 598 aa9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 ADAMTS8Q9UP79 889 aa9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 CAGE1Q8TC20 777 aa9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 PRG4Q92954 1404 aaPredicted RBP9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 PDZRN3Q9UPQ7 1066 aa9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 TWISTNBQ3B726 338 aaPredicted RBP9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 CCDC158Q5M9N0 1113 aa9.97□□□□□ -0.81
SPTLC3-201ENST00000399002 NAP1L1P55209 391 aaKnown RBP9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 TCP11L2Q8N4U5 519 aa9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 CDKL5O76039 1030 aa9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 CCDC192P0DO97 292 aa9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 ODF2Q5BJF6 829 aa9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 CT47A1Q5JQC4 288 aaPredicted RBP9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 TOPBP1Q92547 1522 aa9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 CABP2Q9NPB3 220 aa9.96□□□□□ -0.81
SPTLC3-201ENST00000399002 FAM135AQ9P2D6 1515 aa9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 PTPN23Q9H3S7 1636 aa9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 TTC39AQ5SRH9 613 aa9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 IQCEQ6IPM2 695 aa9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 LRRCC1Q9C099 1032 aa9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 CYP46A1Q9Y6A2 500 aa9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 FOXD4L6Q3SYB3 417 aaPredicted RBP9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 FOXD4L3Q6VB84 417 aaPredicted RBP9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 ABCC11Q96J66 1382 aa9.96□□□□□ -0.82
SPTLC3-201ENST00000399002 ERLIN2O94905 339 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 MTHFSP49914 203 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 NEUROD6Q96NK8 337 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 SDF4Q9BRK5 362 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 SLC52A1Q9NWF4 448 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 FAM13BQ9NYF5 915 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 HMOX1P09601 288 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 CALRP27797 417 aaKnown RBP9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 KRT32Q14532 448 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 IQGAP2Q13576 1575 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 PDE4CQ08493 712 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 STIM1Q13586 685 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 CDK5RAP3Q96JB5 506 aa9.95□□□□□ -0.82
SPTLC3-201ENST00000399002 POGZQ7Z3K3 1410 aa9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 GGNBP2Q9H3C7 697 aa9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 NOB1Q9ULX3 412 aaKnown RBP9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 MEX3CQ5U5Q3 659 aaKnown RBP9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 WASF1Q92558 559 aa9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 TRIM5Q9C035 493 aa9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 ZNHIT6Q9NWK9 470 aaKnown RBP9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 NACAP1Q9BZK3 213 aa9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 PDILTQ8N807 584 aa9.94□□□□□ -0.82
SPTLC3-201ENST00000399002 RTEL1-TNFRSF6BF6WH68 1400 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 HSP90AB2PQ58FF8 381 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 NOL7Q9UMY1 257 aaKnown RBP9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 SPG7Q9UQ90 795 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 OFD1O75665 1012 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 SMC2O95347 1197 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 DHX29Q7Z478 1369 aaKnown RBP9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 SURF6O75683 361 aaKnown RBP9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 EXOSC9Q06265 439 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms